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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 3
  • mitochondrion 5
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G191500.1 Wheat mitochondrion 92.77 93.9
TraesCS1B01G193300.1 Wheat mitochondrion 92.37 93.5
TraesCS1A01G185400.1 Wheat mitochondrion 91.97 93.09
Os10t0532600-01 Rice mitochondrion 73.49 69.58
Zm00001d029718_P001 Maize mitochondrion 61.85 59.23
EER94592 Sorghum mitochondrion 66.27 58.51
Zm00001d047346_P001 Maize mitochondrion 62.25 56.36
GSMUA_Achr5P20250_001 Banana plastid 39.76 47.83
GSMUA_Achr11P... Banana plastid 31.73 45.93
GSMUA_Achr1P03740_001 Banana plastid 29.72 42.53
GSMUA_Achr8P12190_001 Banana plastid 31.33 39.8
Solyc11g068780.1.1 Tomato cytosol 21.69 39.42
PGSC0003DMT400050511 Potato cytosol 20.88 37.41
HORVU4Hr1G083150.1 Barley plastid 37.35 36.76
AT3G52525.1 Thale cress plastid 21.29 33.33
VIT_08s0007g02550.t01 Wine grape mitochondrion, plastid 24.9 33.33
Solyc10g082050.1.1 Tomato mitochondrion 23.69 33.15
HORVU6Hr1G065900.1 Barley mitochondrion, plastid 39.36 33.0
KRH72226 Soybean mitochondrion 22.89 32.76
KRH67981 Soybean mitochondrion 24.9 32.63
Solyc01g007800.2.1 Tomato mitochondrion 23.69 32.42
PGSC0003DMT400042334 Potato mitochondrion 23.69 32.07
KRG96237 Soybean mitochondrion 24.5 31.94
KRH32810 Soybean mitochondrion 22.49 31.64
PGSC0003DMT400072347 Potato mitochondrion, plastid 23.29 30.69
Bra005303.1-P Field mustard mitochondrion, plastid 22.89 30.65
CDX75076 Canola nucleus 22.89 30.65
KRH26670 Soybean mitochondrion 22.49 30.11
AT2G36026.1 Thale cress nucleus, plastid 21.69 29.51
Bra017266.1-P Field mustard nucleus 21.69 29.03
CDY43753 Canola nucleus 21.69 29.03
KRH22646 Soybean mitochondrion, nucleus 21.29 28.8
KRH30374 Soybean nucleus, plastid 20.48 25.89
KRH25295 Soybean nucleus, plastid 20.08 25.64
HORVU3Hr1G083700.1 Barley plastid 22.89 25.45
HORVU1Hr1G074020.1 Barley nucleus, plastid 21.69 23.79
HORVU2Hr1G094240.1 Barley cytosol, mitochondrion, plastid 32.13 22.28
HORVU2Hr1G093380.1 Barley mitochondrion 17.27 16.86
HORVU3Hr1G055980.1 Barley nucleus 20.88 15.48
HORVU3Hr1G030870.1 Barley nucleus 22.09 15.36
HORVU3Hr1G071640.1 Barley nucleus 16.06 13.84
HORVU4Hr1G070860.1 Barley cytosol, mitochondrion 18.47 13.69
HORVU4Hr1G049960.1 Barley mitochondrion 12.85 11.43
HORVU3Hr1G081260.2 Barley mitochondrion 17.67 11.22
HORVU1Hr1G069900.1 Barley endoplasmic reticulum, mitochondrion, nucleus, plastid 18.88 11.16
HORVU1Hr1G076490.1 Barley nucleus 15.26 10.7
Protein Annotations
EnsemblPlants:HORVU1Hr1G049440.1EnsemblPlantsGene:HORVU1Hr1G049440GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0045892InterPro:IPR006458InterPro:OvateInterPro:Ovate_Cncoils:Coil
PANTHER:PTHR33057PANTHER:PTHR33057:SF34PFAM:PF04844PFscan:PS51754SEG:segTIGRFAMs:TIGR01568
UniParc:UPI000296E0E5UniProt:M0V2C0MapMan:15.5.37:::
Description
No Description!
Coordinates
chrchr1H:+:366018504..366019813
Molecular Weight (calculated)
26674.6 Da
IEP (calculated)
10.828
GRAVY (calculated)
-0.409
Length
249 amino acids
Sequence
(BLAST)
001: MKAMILRRRG AGGGLRIPRK GRGFMCGCGG SKAVSVSDGS DKQSPMATPP TNTSTATTAT TTMSTVATTA TRRAGNSRTA SLISTAAASS SFSHSSTDEA
101: DTSVGSTPSV AALLRQLAEL ERTVRSLQGE AADDGRRHRR TTSEGGGRRV EESVAVVKES ADPLADFRRS MLQMIVEKEI VGGADLRELL HRFLSLNSPH
201: HHHLIIRAFA EIWEEVFSGY ERTPDFLVSN SHGRKRLPAA NSLHGTVRC
Best Arabidopsis Sequence Match ( AT2G36026.1 )
(BLAST)
001: MTTGKSKKKK MVLKAVSVVD IGCGNCKFPS LSSFFNPSPK KPRLYSSNYG HCHSSTPTTA SSSSAVPSTS HWFSDTSSSS ATPSAAAVAV EKDSDDPYLD
101: FRQSMLQMIL ENEIYSKNDL RELLHCFLSL NEPYHHGIII RAFSEIWDGV FSAAKRRGDV QESPLVHRHG SRASHRNHYH RSK
Arabidopsis Description
Ovate family protein [Source:UniProtKB/TrEMBL;Acc:B3H6R4]
SUBAcon: [plastid,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.