Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G415000.1 | Wheat | mitochondrion | 77.99 | 74.87 |
| TraesCS2A01G396600.1 | Wheat | mitochondrion, plastid | 78.27 | 74.14 |
| TraesCS2D01G394400.1 | Wheat | mitochondrion | 75.49 | 70.94 |
| Os04t0577700-01 | Rice | nucleus | 55.71 | 54.5 |
| Zm00001d002594_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 51.25 | 46.35 |
| EES11304 | Sorghum | plastid | 52.65 | 46.21 |
| Zm00001d026061_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 47.63 | 44.65 |
| GSMUA_Achr1P03740_001 | Banana | plastid | 18.66 | 38.51 |
| HORVU6Hr1G065900.1 | Barley | mitochondrion, plastid | 31.48 | 38.05 |
| GSMUA_Achr11P... | Banana | plastid | 16.71 | 34.88 |
| GSMUA_Achr5P20250_001 | Banana | plastid | 20.06 | 34.78 |
| GSMUA_Achr8P12190_001 | Banana | plastid | 17.55 | 32.14 |
| HORVU1Hr1G049440.1 | Barley | mitochondrion | 22.28 | 32.13 |
| Solyc11g068780.1.1 | Tomato | cytosol | 11.98 | 31.39 |
| AT3G52525.1 | Thale cress | plastid | 13.09 | 29.56 |
| PGSC0003DMT400050511 | Potato | cytosol | 11.42 | 29.5 |
| Solyc10g082050.1.1 | Tomato | mitochondrion | 14.21 | 28.65 |
| PGSC0003DMT400072347 | Potato | mitochondrion, plastid | 14.48 | 27.51 |
| HORVU4Hr1G083150.1 | Barley | plastid | 19.22 | 27.27 |
| KRH72226 | Soybean | mitochondrion | 13.09 | 27.01 |
| VIT_08s0007g02550.t01 | Wine grape | mitochondrion, plastid | 13.93 | 26.88 |
| KRH32810 | Soybean | mitochondrion | 12.81 | 25.99 |
| Solyc01g007800.2.1 | Tomato | mitochondrion | 13.09 | 25.82 |
| KRH67981 | Soybean | mitochondrion | 13.65 | 25.79 |
| KRG96237 | Soybean | mitochondrion | 13.65 | 25.65 |
| PGSC0003DMT400042334 | Potato | mitochondrion | 13.09 | 25.54 |
| Bra005303.1-P | Field mustard | mitochondrion, plastid | 12.81 | 24.73 |
| CDX75076 | Canola | nucleus | 12.81 | 24.73 |
| KRH26670 | Soybean | mitochondrion | 12.81 | 24.73 |
| AT2G36026.1 | Thale cress | nucleus, plastid | 12.53 | 24.59 |
| KRH22646 | Soybean | mitochondrion, nucleus | 12.53 | 24.46 |
| CDY43753 | Canola | nucleus | 12.53 | 24.19 |
| Bra017266.1-P | Field mustard | nucleus | 12.53 | 24.19 |
| KRH30374 | Soybean | nucleus, plastid | 11.42 | 20.81 |
| KRH25295 | Soybean | nucleus, plastid | 11.14 | 20.51 |
| HORVU3Hr1G083700.1 | Barley | plastid | 11.98 | 19.2 |
| HORVU1Hr1G074020.1 | Barley | nucleus, plastid | 11.7 | 18.5 |
| HORVU3Hr1G055980.1 | Barley | nucleus | 15.6 | 16.67 |
| HORVU4Hr1G070860.1 | Barley | cytosol, mitochondrion | 13.37 | 14.29 |
| HORVU2Hr1G093380.1 | Barley | mitochondrion | 10.03 | 14.12 |
| HORVU3Hr1G071640.1 | Barley | nucleus | 11.14 | 13.84 |
| HORVU3Hr1G081260.2 | Barley | mitochondrion | 15.04 | 13.78 |
| HORVU3Hr1G030870.1 | Barley | nucleus | 13.09 | 13.13 |
| HORVU4Hr1G049960.1 | Barley | mitochondrion | 10.03 | 12.86 |
| HORVU1Hr1G076490.1 | Barley | nucleus | 11.7 | 11.83 |
| HORVU1Hr1G069900.1 | Barley | endoplasmic reticulum, mitochondrion, nucleus, plastid | 12.26 | 10.45 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G094240.1 | EnsemblPlantsGene:HORVU2Hr1G094240 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045892 | InterPro:IPR006458 | InterPro:Ovate | InterPro:Ovate_C | ncoils:Coil |
| PANTHER:PTHR33057 | PANTHER:PTHR33057:SF6 | PFAM:PF04844 | PFscan:PS51754 | SEG:seg | TIGRFAMs:TIGR01568 |
| UniParc:UPI000B478618 | UniProt:A0A287IZT8 | MapMan:15.5.37 | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:663983126..663984285
Molecular Weight (calculated)
35597.5 Da
IEP (calculated)
8.674
GRAVY (calculated)
-0.841
Length
359 amino acids
Sequence
(BLAST)
(BLAST)
001: LPKCLWASPG WVAXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXEAST PTTATSRRAR THPSASTSTG TLTVPSASSS FLWEDADADA DEVECKRESS
101: ATAPTSFSGL LRELSELERS IKSCARTKSP PRNHFSPPPP LPPPPPPPPP PLPSRPVQRR AVRSEDKPST KEGHGDFSPP RPPSSSQVQT QQQQQQHRRA
201: KSVDKVSRPE GDAHLTPLPP RPLPPPPPLE PLRNAKAEED KSKSKEDEKQ QRSSTPQPAP KHRKAMSCDS NNHNGFGGGG GLDGSVAVVK QSEDPLSDFR
301: RSMVNMIVEN GIVTGDELRE LLRRFLALNA PRHHDAILRA FAEIWDEVFA PTTANREPE
101: ATAPTSFSGL LRELSELERS IKSCARTKSP PRNHFSPPPP LPPPPPPPPP PLPSRPVQRR AVRSEDKPST KEGHGDFSPP RPPSSSQVQT QQQQQQHRRA
201: KSVDKVSRPE GDAHLTPLPP RPLPPPPPLE PLRNAKAEED KSKSKEDEKQ QRSSTPQPAP KHRKAMSCDS NNHNGFGGGG GLDGSVAVVK QSEDPLSDFR
301: RSMVNMIVEN GIVTGDELRE LLRRFLALNA PRHHDAILRA FAEIWDEVFA PTTANREPE
001: MATKSKKKIL KTVSVVDISC GNCIKPTFAS IFNFFSKKPK RPSSTYRHCH SSISSATPSS TPLATASVAV EKDSDDPYLD FRQSMLQMIL ENQIYSKDEL
101: RELLQCFLSL NSHYHHGIIV RAFSEIWEDV SSAAASAVEA SPLITRHVSR ASRDYYNYY
101: RELLQCFLSL NSHYHHGIIV RAFSEIWEDV SSAAASAVEA SPLITRHVSR ASRDYYNYY
Arabidopsis Description
OFP6Transcription repressor OFP6 [Source:UniProtKB/Swiss-Prot;Acc:Q3EAL1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.