Factsheet for HORVU2Hr1G093380.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G392200.1	Wheat	mitochondrion	89.02	88.33
TraesCS2B01G410500.1	Wheat	mitochondrion	87.06	87.75
TraesCS2D01G390300.1	Wheat	mitochondrion	86.67	86.67
EES17993	Sorghum	nucleus, plastid	54.9	56.68
Zm00001d009993_P001	Maize	nucleus, plastid	53.73	52.9
Os05t0324600-01	Rice	nucleus	52.16	51.15
HORVU3Hr1G081260.2	Barley	mitochondrion	29.41	19.13
HORVU1Hr1G074020.1	Barley	nucleus, plastid	15.69	17.62
HORVU1Hr1G069900.1	Barley	endoplasmic reticulum, mitochondrion, nucleus, plastid	29.02	17.58
HORVU3Hr1G071640.1	Barley	nucleus	19.61	17.3
HORVU1Hr1G049440.1	Barley	mitochondrion	16.86	17.27
HORVU4Hr1G049960.1	Barley	mitochondrion	18.82	17.14
HORVU3Hr1G083700.1	Barley	plastid	14.9	16.96
HORVU1Hr1G076490.1	Barley	nucleus	20.0	14.37
HORVU3Hr1G030870.1	Barley	nucleus	18.43	13.13
HORVU4Hr1G083150.1	Barley	plastid	12.94	13.04
HORVU6Hr1G065900.1	Barley	mitochondrion, plastid	14.9	12.79
HORVU3Hr1G055980.1	Barley	nucleus	16.47	12.5
HORVU2Hr1G094240.1	Barley	cytosol, mitochondrion, plastid	14.12	10.03
HORVU4Hr1G070860.1	Barley	cytosol, mitochondrion	12.55	9.52

Protein Annotations

MapMan:15.5.37	EMBL:AK357737	InterPro:DNA_bnd_dom_ovate	UniProt:F2D1I0	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0045892	EnsemblPlantsGene:HORVU2Hr1G093380	EnsemblPlants:HORVU2Hr1G093380.1	InterPro:IPR006458	InterPro:Ovate
InterPro:Ovate_C	PFAM:PF04844	PFAM:PF13724	PFscan:PS51754	PANTHER:PTHR33057	PANTHER:PTHR33057:SF5
TIGRFAMs:TIGR01568	UniParc:UPI000200512F	SEG:seg	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2D1I0]

Coordinates

chrchr2H:+:658220168..658221677

Molecular Weight (calculated)

28976.7 Da

IEP (calculated)

11.524

GRAVY (calculated)

-0.635

Length

255 amino acids

Sequence
(BLAST)

001: MGRQHYRFRL SHLLPNSWFY KLRDMKRPRP PSQQRSAAAT RTPRRSSSSH YCHGTTTPRP LPLPPYQSYS SYLQAKKMLP EKLPLSPLCL SPKATNIRLP
101: NDHHQSPSST SAADVVVDDF RALQLRPIRT RTASIPSRSV HHSTTASSTC PSSPRLRSRR LRLSSSGRCR VSTRCTGRRR SARRSIAVVV ASTDPYKDFR
201: ESMVDMIVGT DMRGAEALRD LLDCYLSLNS REYHGVITEV FRGIWLQIVR DGVET

Best Arabidopsis Sequence Match ( AT5G58360.1 )
(BLAST)

001: MKQKMGTHKF RFSDMMPHSW LYKLKGMSRS SRKHHLSSPK HLSSADASSS RKLRDPLRRL SSTAHHPQAS NSPPKSSSFK RKIKRKTVYK PSSRLKLSTS
101: SSLNHRSKSS SSANAISDSA VGSFLDRVSS PSDQNFVHDP EPHSSIDIKD ELSVRKLDDV PEDPSVSPNL SPETAKEPPF EMMTQQKLKK PKAHSSGIKI
201: PTKIVRKKKK ERTSQVSKKK GVVKSFAIVL SSVDPEKDFR ESMVEMIMEN KMREQKDLED LLACYLSLNS SEYHDVIIKA FENTWLHLTQ GLSISL

Arabidopsis Description

OFP3Transcription repressor OFP3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVL4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.