Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G492400.1 | Wheat | nucleus | 73.52 | 79.83 |
| TraesCS4D01G316300.1 | Wheat | nucleus, plastid | 70.75 | 79.2 |
| TraesCS4B01G319700.1 | Wheat | plastid | 82.61 | 68.52 |
| EER92948 | Sorghum | plastid | 47.04 | 46.67 |
| Zm00001d027453_P001 | Maize | plastid | 43.08 | 44.13 |
| HORVU1Hr1G049440.1 | Barley | mitochondrion | 36.76 | 37.35 |
| Os03t0126450-00 | Rice | nucleus | 48.22 | 36.2 |
| GSMUA_Achr5P20250_001 | Banana | plastid | 29.25 | 35.75 |
| GSMUA_Achr11P... | Banana | plastid | 22.92 | 33.72 |
| GSMUA_Achr1P03740_001 | Banana | plastid | 21.74 | 31.61 |
| GSMUA_Achr8P12190_001 | Banana | plastid | 24.11 | 31.12 |
| Solyc11g068780.1.1 | Tomato | cytosol | 15.81 | 29.2 |
| AT3G52525.1 | Thale cress | plastid | 17.0 | 27.04 |
| PGSC0003DMT400050511 | Potato | cytosol | 14.62 | 26.62 |
| KRH32810 | Soybean | mitochondrion | 16.6 | 23.73 |
| HORVU6Hr1G065900.1 | Barley | mitochondrion, plastid | 27.27 | 23.23 |
| KRH72226 | Soybean | mitochondrion | 15.81 | 22.99 |
| Solyc10g082050.1.1 | Tomato | mitochondrion | 15.41 | 21.91 |
| VIT_08s0007g02550.t01 | Wine grape | mitochondrion, plastid | 15.81 | 21.51 |
| HORVU1Hr1G074020.1 | Barley | nucleus, plastid | 18.97 | 21.15 |
| HORVU3Hr1G083700.1 | Barley | plastid | 18.18 | 20.54 |
| KRH67981 | Soybean | mitochondrion | 15.41 | 20.53 |
| Bra005303.1-P | Field mustard | mitochondrion, plastid | 15.02 | 20.43 |
| Bra017266.1-P | Field mustard | nucleus | 15.02 | 20.43 |
| CDX75076 | Canola | nucleus | 15.02 | 20.43 |
| CDY43753 | Canola | nucleus | 15.02 | 20.43 |
| KRG96237 | Soybean | mitochondrion | 15.41 | 20.42 |
| Solyc01g007800.2.1 | Tomato | mitochondrion | 14.62 | 20.33 |
| AT2G36026.1 | Thale cress | nucleus, plastid | 14.62 | 20.22 |
| PGSC0003DMT400042334 | Potato | mitochondrion | 14.62 | 20.11 |
| PGSC0003DMT400072347 | Potato | mitochondrion, plastid | 15.02 | 20.11 |
| KRH26670 | Soybean | mitochondrion | 14.62 | 19.89 |
| KRH22646 | Soybean | mitochondrion, nucleus | 14.23 | 19.57 |
| HORVU2Hr1G094240.1 | Barley | cytosol, mitochondrion, plastid | 27.27 | 19.22 |
| KRH30374 | Soybean | nucleus, plastid | 14.23 | 18.27 |
| KRH25295 | Soybean | nucleus, plastid | 13.83 | 17.95 |
| HORVU3Hr1G071640.1 | Barley | nucleus | 17.0 | 14.88 |
| HORVU3Hr1G055980.1 | Barley | nucleus | 18.58 | 13.99 |
| HORVU4Hr1G070860.1 | Barley | cytosol, mitochondrion | 17.39 | 13.1 |
| HORVU2Hr1G093380.1 | Barley | mitochondrion | 13.04 | 12.94 |
| HORVU4Hr1G049960.1 | Barley | mitochondrion | 14.23 | 12.86 |
| HORVU3Hr1G030870.1 | Barley | nucleus | 17.0 | 12.01 |
| HORVU1Hr1G076490.1 | Barley | nucleus | 15.02 | 10.7 |
| HORVU3Hr1G081260.2 | Barley | mitochondrion | 15.81 | 10.2 |
| HORVU1Hr1G069900.1 | Barley | endoplasmic reticulum, mitochondrion, nucleus, plastid | 15.02 | 9.03 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G083150.1 | EnsemblPlantsGene:HORVU4Hr1G083150 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045892 | InterPro:IPR006458 | InterPro:Ovate | InterPro:Ovate_C | PANTHER:PTHR33057 |
| PANTHER:PTHR33057:SF34 | PFAM:PF04844 | PFscan:PS51754 | SEG:seg | TIGRFAMs:TIGR01568 | UniParc:UPI000B4880E9 |
| UniProt:A0A287PWD5 | MapMan:15.5.37 | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:-:624306944..624308017
Molecular Weight (calculated)
26547.7 Da
IEP (calculated)
10.994
GRAVY (calculated)
-0.369
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: VHSTRLFLSP SSSSCPSLSL AELASQVARR VTLSVLDNQA MKATTPRGGG PENVMPKKRK KAGAGGFMFG CGGSKSVAVV AGNLSTMALA KSSLSSTAAT
101: AKPAPAAKPR APASHDAEGA PSVDALLGQL RELERGXRHR RGASDVWGGG RGRLEEESVA VVTETEDPLG EFRRSMAEMV VENGITGGAE LRELLQRFLS
201: LNSARHHHLI LRAFADVWEE LFAGSGRDPM QKHKQKRPAV SPAPAGHRGR ASS
101: AKPAPAAKPR APASHDAEGA PSVDALLGQL RELERGXRHR RGASDVWGGG RGRLEEESVA VVTETEDPLG EFRRSMAEMV VENGITGGAE LRELLQRFLS
201: LNSARHHHLI LRAFADVWEE LFAGSGRDPM QKHKQKRPAV SPAPAGHRGR ASS
001: MATKSKKKIL KTVSVVDISC GNCIKPTFAS IFNFFSKKPK RPSSTYRHCH SSISSATPSS TPLATASVAV EKDSDDPYLD FRQSMLQMIL ENQIYSKDEL
101: RELLQCFLSL NSHYHHGIIV RAFSEIWEDV SSAAASAVEA SPLITRHVSR ASRDYYNYY
101: RELLQCFLSL NSHYHHGIIV RAFSEIWEDV SSAAASAVEA SPLITRHVSR ASRDYYNYY
Arabidopsis Description
OFP6Transcription repressor OFP6 [Source:UniProtKB/Swiss-Prot;Acc:Q3EAL1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.