CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER90950
EER91090
EER95833
KXG40306
OQU90921
OQU91064

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G52525.1	KXG40306	AT1G62990.1	15781858
AT3G52525.1	EER90950	AT4G08150.1	15781858
AT3G52525.1	EER91090	AT4G08150.1	15781858
AT3G52525.1	EER95833	AT4G08150.1	15781858
AT3G52525.1	OQU90921	AT4G08150.1	15781858
AT3G52525.1	OQU91064	AT4G08150.1	15781858

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027453_P001	Maize	plastid	74.9	77.33
TraesCS4D01G316300.1	Wheat	nucleus, plastid	51.76	58.41
TraesCS5A01G492400.1	Wheat	nucleus	50.59	55.36
HORVU4Hr1G083150.1	Barley	plastid	46.67	47.04
TraesCS4B01G319700.1	Wheat	plastid	50.98	42.62
Os03t0126450-00	Rice	nucleus	49.02	37.09
EER94592	Sorghum	mitochondrion	40.0	36.17
GSMUA_Achr11P...	Banana	plastid	23.14	34.3
GSMUA_Achr5P20250_001	Banana	plastid	27.84	34.3
GSMUA_Achr1P03740_001	Banana	plastid	23.14	33.91
Solyc11g068780.1.1	Tomato	cytosol	17.65	32.85
PGSC0003DMT400050511	Potato	cytosol	17.25	31.65
GSMUA_Achr8P12190_001	Banana	plastid	23.92	31.12
AT3G52525.1	Thale cress	plastid	18.43	29.56
OQU85631	Sorghum	plastid	34.12	28.25
KRH32810	Soybean	mitochondrion	18.82	27.12
KRH26670	Soybean	mitochondrion	19.22	26.34
KRH22646	Soybean	mitochondrion, nucleus	18.82	26.09
KRH72226	Soybean	mitochondrion	17.65	25.86
Solyc10g082050.1.1	Tomato	mitochondrion	17.65	25.28
Bra005303.1-P	Field mustard	mitochondrion, plastid	18.04	24.73
CDX75076	Canola	nucleus	18.04	24.73
AT2G36026.1	Thale cress	nucleus, plastid	17.65	24.59
KRH67981	Soybean	mitochondrion	18.04	24.21
VIT_08s0007g02550.t01	Wine grape	mitochondrion, plastid	17.65	24.19
KRG96237	Soybean	mitochondrion	18.04	24.08
PGSC0003DMT400072347	Potato	mitochondrion, plastid	17.65	23.81
CDY43753	Canola	nucleus	17.25	23.66
Bra017266.1-P	Field mustard	nucleus	17.25	23.66
Solyc01g007800.2.1	Tomato	mitochondrion	16.47	23.08
KRH30374	Soybean	nucleus, plastid	17.65	22.84
PGSC0003DMT400042334	Potato	mitochondrion	16.47	22.83
KRH25295	Soybean	nucleus, plastid	17.25	22.56
EES03931	Sorghum	plastid	20.78	22.46
EES11304	Sorghum	plastid	35.29	22.0
KXG20752	Sorghum	cytosol, nucleus	14.9	21.47
KXG33158	Sorghum	cytosol, plastid	10.2	18.7
EES18304	Sorghum	nucleus, plastid	15.69	17.47
EES17897	Sorghum	nucleus, plastid	18.04	15.23
EER92692	Sorghum	mitochondrion	18.43	15.06
EES17993	Sorghum	nucleus, plastid	13.73	14.17
OQU90474	Sorghum	mitochondrion	14.9	13.72
OQU92638	Sorghum	mitochondrion	15.69	13.61
OQU78505	Sorghum	nucleus	18.82	13.33
EES18387	Sorghum	mitochondrion	19.22	13.0
EES02214	Sorghum	mitochondrion, nucleus	18.43	12.43
EES19813	Sorghum	nucleus	14.9	11.34
EES01480	Sorghum	nucleus	15.69	11.3
EES03313	Sorghum	nucleus	18.04	11.08
KXG33624	Sorghum	nucleus	17.65	8.29

Protein Annotations

MapMan:15.5.37	MapMan:21.4.1.1.2	EntrezGene:8061450	UniProt:C5X008	EnsemblPlants:EER92948	ProteinID:EER92948
ProteinID:EER92948.1	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0045892	InterPro:IPR006458	InterPro:Ovate	InterPro:Ovate_C	PFAM:PF04844	PFscan:PS51754
PANTHER:PTHR33057	PANTHER:PTHR33057:SF34	EnsemblPlantsGene:SORBI_3001G523500	unigene:Sbi.7876	TIGRFAMs:TIGR01568	UniParc:UPI0001A82D0C
RefSeq:XP_002465950.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:78833256..78834023

Molecular Weight (calculated)

26248.0 Da

IEP (calculated)

11.299

GRAVY (calculated)

-0.441

Length

255 amino acids

Sequence
(BLAST)

001: MKATTWRGAP GTLPATAKKK RKKKAPAPRG FMCGCGSTRS VSVDISAVTT TPMKRGASTA VAPAGEPASA AKTTAGRGRD ADADASAEGT PSVDSLLRQL
101: RELERGVRAL GVREREADGG VGGSGSSTAG TTKARPSPRP GHVRSASVVG RRLDSESVAV VTESEDPLGD FRRSMAQMIV ENGITGGAEL RELLRRFLAL
201: NAACHHHLIL RAFADVWDEL FSGGGGGGSH VAAQSHGSGG GRASKRPRGR ADTLS

Best Arabidopsis Sequence Match ( AT3G52525.1 )
(BLAST)

001: MATKSKKKIL KTVSVVDISC GNCIKPTFAS IFNFFSKKPK RPSSTYRHCH SSISSATPSS TPLATASVAV EKDSDDPYLD FRQSMLQMIL ENQIYSKDEL
101: RELLQCFLSL NSHYHHGIIV RAFSEIWEDV SSAAASAVEA SPLITRHVSR ASRDYYNYY

Arabidopsis Description

OFP6Transcription repressor OFP6 [Source:UniProtKB/Swiss-Prot;Acc:Q3EAL1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.