CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012498_P001	Maize	nucleus	58.75	88.37
Zm00001d043046_P001	Maize	peroxisome	54.14	79.89
TraesCS3A01G345100.1	Wheat	nucleus	46.96	70.44
Os01t0823500-01	Rice	nucleus	48.99	70.18
TraesCS3B01G377200.1	Wheat	mitochondrion, nucleus	46.78	70.17
TraesCS3D01G339100.1	Wheat	nucleus	47.15	69.75
HORVU3Hr1G081260.2	Barley	mitochondrion	48.43	67.09
EES18387	Sorghum	mitochondrion	32.78	47.21
EES17993	Sorghum	nucleus, plastid	14.0	30.77
OQU90474	Sorghum	mitochondrion	12.52	24.55
EES19813	Sorghum	nucleus	13.26	21.49
OQU92638	Sorghum	mitochondrion	11.42	21.09
EES01480	Sorghum	nucleus	13.44	20.62
EES03931	Sorghum	plastid	8.66	19.92
EES18304	Sorghum	nucleus, plastid	8.29	19.65
KXG20752	Sorghum	cytosol, nucleus	6.26	19.21
EES17897	Sorghum	nucleus, plastid	10.13	18.21
EER92948	Sorghum	plastid	8.29	17.65
EER92692	Sorghum	mitochondrion	9.58	16.67
KXG33158	Sorghum	cytosol, plastid	4.05	15.83
EER94592	Sorghum	mitochondrion	8.1	15.6
OQU78505	Sorghum	nucleus	10.13	15.28
OQU85631	Sorghum	plastid	8.66	15.26
EES02214	Sorghum	mitochondrion, nucleus	9.21	13.23
EES03313	Sorghum	nucleus	9.94	13.01
EES11304	Sorghum	plastid	9.02	11.98

Protein Annotations

MapMan:15.5.37	UniProt:A0A1B6Q6S5	InterPro:DNA_bnd_dom_ovate	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0045892	InterPro:IPR006458	EnsemblPlants:KXG33624	ProteinID:KXG33624	ProteinID:KXG33624.2	InterPro:Ovate
InterPro:Ovate_C	PFAM:PF04844	PFAM:PF13724	PFscan:PS51754	PANTHER:PTHR33057	PANTHER:PTHR33057:SF37
EnsemblPlantsGene:SORBI_3003G339100	TIGRFAMs:TIGR01568	UniParc:UPI0009DC939C	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:-:66213343..66215932

Molecular Weight (calculated)

60058.8 Da

IEP (calculated)

11.257

GRAVY (calculated)

-0.658

Length

543 amino acids

Sequence
(BLAST)

001: MTLCLREDGP DEVLTHLRWL SRVVRICCGG PRRIEEWEEG SGRRRARERE DKRRLASPSS PRLLPFRPTP PHPTLVPCRA CSARHFLRSP ALPRLALISS
101: SPRRASAPPR TEQAKRTQQA TKEKHSSSSA RGGKSLLPLC RCFSPHSFVR AMGRHKFRLS DMIPNAWFFK LRDMRARGGG GGAAAAAGSP RVAALRPPPS
201: TPRQAAPWLP HRASHYYTPR AGDLVGLGSP LHPKASDTRF PPLQLSPPRR SSRRRHHHHH RRRSVKLAAA APPASASSSS GVASSPASTA ACRCGRGRRP
301: DLVVVEAPDT PPCRRDIFVG YSSDDDDDDD EYVKKPTVAA AVRAHDNKLE GKVITSATDI IIDLRTERRP EKTTLPPIMT KPAAKREPDV CQLVDKHIDV
401: LAHATRRASP VVPEQSKLKP PRRSVSSSSA RRLKTRANTP RLASSKKCRS PTTTTTTARS PARTKPPPPP PLAESFAVVK SSRDPRRDFR ESMEEMITEN
501: GIRTAADLED LLACYLSLNA AEYHDLIVEV FEHIWVTLSD VKV

Best Arabidopsis Sequence Match ( AT1G06920.1 )
(BLAST)

001: MRNYKLRLSV MSPSEWFHKL KNMTKPRKKH SLPLYSINTT KKRKPSSESK SLPYSSTSYF FNRSRSRTSF ESRILQISPR NSLHNIQSKR KTVYKPSPPS
101: SSIVSAGFNK TFHQSHDSLS ASSNLKVISS EDDIIIDMNN RDFKKKTFKE ITKFDSTEKA CRASNRTKET HIPHHLSVKV SKEKEDEEED ACRTKKKHQK
201: TLVSSGRRSS AKSPRIKLRA RSPRIQVSPR RSKSRSQNKQ ILDSFAVIKS SIDPSKDFRE SMVEMIAENN IRTSNDMEDL LVCYLTLNPK EYHDLIIKVF
301: VQVWLEVINS TFASK

Arabidopsis Description

OFP4Transcription repressor OFP4 [Source:UniProtKB/Swiss-Prot;Acc:F4HNU8]
SUBAcon: [mitochondrion,plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.