Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d002594_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 82.89 | 85.39 |
| Zm00001d026061_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 72.62 | 77.55 |
| Os04t0577700-01 | Rice | nucleus | 57.21 | 63.76 |
| TraesCS2A01G396600.1 | Wheat | mitochondrion, plastid | 54.28 | 58.58 |
| TraesCS2D01G394400.1 | Wheat | mitochondrion | 54.52 | 58.38 |
| TraesCS2B01G415000.1 | Wheat | mitochondrion | 53.3 | 58.29 |
| HORVU2Hr1G094240.1 | Barley | cytosol, mitochondrion, plastid | 46.21 | 52.65 |
| GSMUA_Achr1P03740_001 | Banana | plastid | 20.78 | 48.85 |
| OQU85631 | Sorghum | plastid | 34.96 | 46.43 |
| GSMUA_Achr11P... | Banana | plastid | 18.34 | 43.6 |
| GSMUA_Achr8P12190_001 | Banana | plastid | 19.56 | 40.82 |
| GSMUA_Achr5P20250_001 | Banana | plastid | 20.54 | 40.58 |
| Solyc11g068780.1.1 | Tomato | cytosol | 12.96 | 38.69 |
| EER94592 | Sorghum | mitochondrion | 26.16 | 37.94 |
| PGSC0003DMT400050511 | Potato | cytosol | 12.47 | 36.69 |
| EER92948 | Sorghum | plastid | 22.0 | 35.29 |
| AT3G52525.1 | Thale cress | plastid | 13.2 | 33.96 |
| KRH22646 | Soybean | mitochondrion, nucleus | 14.67 | 32.61 |
| Solyc10g082050.1.1 | Tomato | mitochondrion | 14.18 | 32.58 |
| VIT_08s0007g02550.t01 | Wine grape | mitochondrion, plastid | 14.67 | 32.26 |
| KRH26670 | Soybean | mitochondrion | 14.67 | 32.26 |
| KRH67981 | Soybean | mitochondrion | 14.91 | 32.11 |
| KRG96237 | Soybean | mitochondrion | 14.67 | 31.41 |
| PGSC0003DMT400072347 | Potato | mitochondrion, plastid | 14.43 | 31.22 |
| KRH72226 | Soybean | mitochondrion | 13.2 | 31.03 |
| Solyc01g007800.2.1 | Tomato | mitochondrion | 13.69 | 30.77 |
| KRH32810 | Soybean | mitochondrion | 13.2 | 30.51 |
| PGSC0003DMT400042334 | Potato | mitochondrion | 13.69 | 30.43 |
| CDX75076 | Canola | nucleus | 12.96 | 28.49 |
| Bra005303.1-P | Field mustard | mitochondrion, plastid | 12.96 | 28.49 |
| AT2G36026.1 | Thale cress | nucleus, plastid | 12.71 | 28.42 |
| CDY43753 | Canola | nucleus | 12.71 | 27.96 |
| Bra017266.1-P | Field mustard | nucleus | 12.71 | 27.96 |
| KRH30374 | Soybean | nucleus, plastid | 13.45 | 27.92 |
| KRH25295 | Soybean | nucleus, plastid | 13.2 | 27.69 |
| KXG20752 | Sorghum | cytosol, nucleus | 10.02 | 23.16 |
| EES03931 | Sorghum | plastid | 12.47 | 21.61 |
| EES18304 | Sorghum | nucleus, plastid | 11.98 | 21.4 |
| OQU90474 | Sorghum | mitochondrion | 13.2 | 19.49 |
| KXG33158 | Sorghum | cytosol, plastid | 6.6 | 19.42 |
| EER92692 | Sorghum | mitochondrion | 13.2 | 17.31 |
| EES17897 | Sorghum | nucleus, plastid | 12.22 | 16.56 |
| OQU78505 | Sorghum | nucleus | 14.43 | 16.39 |
| EES17993 | Sorghum | nucleus, plastid | 9.54 | 15.79 |
| EES02214 | Sorghum | mitochondrion, nucleus | 13.94 | 15.08 |
| EES18387 | Sorghum | mitochondrion | 13.2 | 14.32 |
| EES03313 | Sorghum | nucleus | 14.43 | 14.22 |
| EES01480 | Sorghum | nucleus | 11.98 | 13.84 |
| EES19813 | Sorghum | nucleus | 11.25 | 13.73 |
| OQU92638 | Sorghum | mitochondrion | 9.29 | 12.93 |
| KXG33624 | Sorghum | nucleus | 11.98 | 9.02 |
Protein Annotations
| MapMan:15.5.37 | EntrezGene:8057615 | UniProt:C5YEG2 | EnsemblPlants:EES11304 | ProteinID:EES11304 | ProteinID:EES11304.1 |
| GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045892 |
| InterPro:IPR006458 | InterPro:Ovate | InterPro:Ovate_C | PFAM:PF04844 | PFscan:PS51257 | PFscan:PS51754 |
| PANTHER:PTHR33057 | PANTHER:PTHR33057:SF6 | EnsemblPlantsGene:SORBI_3006G187600 | TIGRFAMs:TIGR01568 | UniParc:UPI0001A86D85 | RefSeq:XP_002446976.1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:+:54220870..54222099
Molecular Weight (calculated)
43278.7 Da
IEP (calculated)
10.498
GRAVY (calculated)
-0.699
Length
409 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPGTAKKRL GVGVVASGGF GLGCGCRDAK AVAVAVAAAS ASPYSAGAAT TATETTTTTS TATWRGARTT TTHPSSTASG SLSTGTLTVP SASSSSFPWE
101: DADAEGDGEE VNCKRESSAA TVSFSGLLRQ LNELEQSVVS WGRKSTSKDY LSPPPPPPPL LPERPAKQRA AHSGGGDSKE GHGNFSPPPP TSFQFQITQQ
201: QHRKTKSMDK ADRQVEAVHS KQPPPPPPPP PPPLPLPPEQ QLKVKSTDDK GVNKKEDTNM LPTPQAPNHR KAKSCDAGPG PGPVRLDGSV GVGVGVAVVK
301: KSDDPLSDFR RSMVNMIVEN RIVTGDELRE LLRHFLALNA PHHHDAILRA FTEIWDEAFS AKTTAHGRRE PAAAAARTTT TTTTPPRPRP TRAPTPPRRR
401: HGPPPRAWR
101: DADAEGDGEE VNCKRESSAA TVSFSGLLRQ LNELEQSVVS WGRKSTSKDY LSPPPPPPPL LPERPAKQRA AHSGGGDSKE GHGNFSPPPP TSFQFQITQQ
201: QHRKTKSMDK ADRQVEAVHS KQPPPPPPPP PPPLPLPPEQ QLKVKSTDDK GVNKKEDTNM LPTPQAPNHR KAKSCDAGPG PGPVRLDGSV GVGVGVAVVK
301: KSDDPLSDFR RSMVNMIVEN RIVTGDELRE LLRHFLALNA PHHHDAILRA FTEIWDEAFS AKTTAHGRRE PAAAAARTTT TTTTPPRPRP TRAPTPPRRR
401: HGPPPRAWR
001: MTTGKSKKKK MVLKAVSVVD IGCGNCKFPS LSSFFNPSPK KPRLYSSNYG HCHSSTPTTA SSSSAVPSTS HWFSDTSSSS ATPSAAAVAV EKDSDDPYLD
101: FRQSMLQMIL ENEIYSKNDL RELLHCFLSL NEPYHHGIII RAFSEIWDGV FSAAKRRGDV QESPLVHRHG SRASHRNHYH RSK
101: FRQSMLQMIL ENEIYSKNDL RELLHCFLSL NEPYHHGIII RAFSEIWDGV FSAAKRRGDV QESPLVHRHG SRASHRNHYH RSK
Arabidopsis Description
Ovate family protein [Source:UniProtKB/TrEMBL;Acc:B3H6R4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.