CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d007168_P001	Maize	mitochondrion	66.79	79.4
Zm00001d022446_P001	Maize	nucleus	63.9	71.95
TraesCS2A01G106000.1	Wheat	nucleus	49.46	49.1
TraesCS2B01G123000.1	Wheat	nucleus	48.38	49.08
TraesCS2D01G105600.1	Wheat	nucleus	48.01	48.19
Os07t0679200-01	Rice	nucleus, plastid	51.62	43.33
OQU92638	Sorghum	mitochondrion	40.43	38.1
EES19813	Sorghum	nucleus	26.71	22.09
EES17993	Sorghum	nucleus, plastid	18.41	20.65
EES18387	Sorghum	mitochondrion	25.99	19.1
EES03931	Sorghum	plastid	16.25	19.07
EES01480	Sorghum	nucleus	22.38	17.51
EES18304	Sorghum	nucleus, plastid	14.08	17.03
KXG20752	Sorghum	cytosol, nucleus	10.83	16.95
KXG33158	Sorghum	cytosol, plastid	7.58	15.11
EER92692	Sorghum	mitochondrion	16.97	15.06
EER92948	Sorghum	plastid	13.72	14.9
EER94592	Sorghum	mitochondrion	15.16	14.89
OQU85631	Sorghum	plastid	15.88	14.29
EES11304	Sorghum	plastid	19.49	13.2
OQU78505	Sorghum	nucleus	16.97	13.06
EES03313	Sorghum	nucleus	18.77	12.53
KXG33624	Sorghum	nucleus	24.55	12.52
EES17897	Sorghum	nucleus, plastid	13.36	12.25
EES02214	Sorghum	mitochondrion, nucleus	14.8	10.85

Protein Annotations

EnsemblPlants:OQU90474	EnsemblPlantsGene:SORBI_3002G417700	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0045892	InterPro:IPR006458	InterPro:Ovate	InterPro:Ovate_C	PANTHER:PTHR33057
PANTHER:PTHR33057:SF27	PFAM:PF04844	PFscan:PS51754	ProteinID:OQU90474	ProteinID:OQU90474.1	SEG:seg
TIGRFAMs:TIGR01568	UniParc:UPI0009DC875A	UniProt:A0A1W0W7V0	MapMan:15.5.37	:	:

Description

hypothetical protein

Coordinates

chr2:+:76498125..76498964

Molecular Weight (calculated)

30842.8 Da

IEP (calculated)

10.794

GRAVY (calculated)

-0.648

Length

277 amino acids

Sequence
(BLAST)

001: MSSWFHRLRR KTAVAGAIAS AAEPPAPPPC SPNRASYYVP SRDRALALPR RPAAAAREDN PKLWDTRFPP PPPPQPSDIV FDVVVAARRD DRFSPAPELK
101: LRPILTRPPP RPDAAGSSSA AASPTGRARL PPPRFHFDAA KGGAAPPDHH RRKKAEEEEE ACTRSQSRKR RRRLRRAGRL RWVYESVVVV KESADPEEDF
201: LESMAEMIAA NGVRSPRGLE ELLACYIALN AADHHRAIVA AFRRAWLHLH LHRAPPPTPT PMTEPRNCMH ESCIVVD

Best Arabidopsis Sequence Match ( AT5G58360.1 )
(BLAST)

001: MKQKMGTHKF RFSDMMPHSW LYKLKGMSRS SRKHHLSSPK HLSSADASSS RKLRDPLRRL SSTAHHPQAS NSPPKSSSFK RKIKRKTVYK PSSRLKLSTS
101: SSLNHRSKSS SSANAISDSA VGSFLDRVSS PSDQNFVHDP EPHSSIDIKD ELSVRKLDDV PEDPSVSPNL SPETAKEPPF EMMTQQKLKK PKAHSSGIKI
201: PTKIVRKKKK ERTSQVSKKK GVVKSFAIVL SSVDPEKDFR ESMVEMIMEN KMREQKDLED LLACYLSLNS SEYHDVIIKA FENTWLHLTQ GLSISL

Arabidopsis Description

OFP3Transcription repressor OFP3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVL4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.