Factsheet for TraesCS2D01G105600.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 2
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G106000.1	Wheat	nucleus	89.49	88.53
TraesCS2B01G123000.1	Wheat	nucleus	86.59	87.55
Zm00001d007168_P001	Maize	mitochondrion	43.84	51.93
OQU90474	Sorghum	mitochondrion	48.19	48.01
Zm00001d022446_P001	Maize	nucleus	42.03	47.15
Os07t0679200-01	Rice	nucleus, plastid	52.9	44.24
TraesCS4D01G171100.1	Wheat	nucleus, plastid	38.77	35.08
TraesCS2D01G390300.1	Wheat	mitochondrion	19.93	21.57
TraesCS1D01G340300.1	Wheat	nucleus	24.64	19.71
TraesCS3D01G289200.1	Wheat	nucleus	21.01	19.59
TraesCS3D01G368500.1	Wheat	plastid	15.22	18.5
TraesCS3D01G339100.1	Wheat	nucleus	23.91	17.98
TraesCS1D01G275100.1	Wheat	plastid	13.41	16.16
TraesCS1D01G299500.1	Wheat	nucleus	21.74	16.13
TraesCS4D01G316300.1	Wheat	nucleus, plastid	12.68	15.49
TraesCS4D01G262000.1	Wheat	mitochondrion	15.58	15.47
TraesCS1D01G191500.1	Wheat	mitochondrion	13.04	14.63
TraesCS6D01G239400.1	Wheat	plastid	14.49	13.51
TraesCS3D01G227100.1	Wheat	nucleus	14.49	12.05
TraesCS2D01G394400.1	Wheat	mitochondrion	15.22	10.99
TraesCS3D01G159700.1	Wheat	mitochondrion, nucleus	12.32	9.69

Protein Annotations

EnsemblPlants:TraesCS2D01G105600.1	EnsemblPlantsGene:TraesCS2D01G105600	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0045892	InterPro:IPR006458	InterPro:Ovate	InterPro:Ovate_C	PANTHER:PTHR33057
PANTHER:PTHR33057:SF27	PFAM:PF04844	PFscan:PS51754	SEG:seg	TIGRFAMs:TIGR01568	MapMan:15.5.37

Description

No Description!

Coordinates

chr2D:-:57146684..57147514

Molecular Weight (calculated)

29952.7 Da

IEP (calculated)

11.106

GRAVY (calculated)

-0.634

Length

276 amino acids

Sequence
(BLAST)

001: MPPPASWFYR LRRKRGGDAG EIARGDRAPA VVTPPPSSAS SREVPVPPPC TPNRASYYVP SGERGAVKGI PIPPKRRDTQ FPRSPQPSDI IFDVVTVARA
101: AADRFDGLRA MPELKLRPIL TKPAGRKADG EEEEASGSGG ASPTARARRR PRLYVKASGG RMGRRPADAQ PPAMATTGPR RRQARRRRWL QESLVVVKES
201: ADPEEDFLAS MAEMIAANDD VRASPRGLEE LLACYLALNA SEHHRAIVAA FRLAWLDDAP TSTAKHRPPP SHGLAG

Best Arabidopsis Sequence Match ( AT5G58360.1 )
(BLAST)

001: MKQKMGTHKF RFSDMMPHSW LYKLKGMSRS SRKHHLSSPK HLSSADASSS RKLRDPLRRL SSTAHHPQAS NSPPKSSSFK RKIKRKTVYK PSSRLKLSTS
101: SSLNHRSKSS SSANAISDSA VGSFLDRVSS PSDQNFVHDP EPHSSIDIKD ELSVRKLDDV PEDPSVSPNL SPETAKEPPF EMMTQQKLKK PKAHSSGIKI
201: PTKIVRKKKK ERTSQVSKKK GVVKSFAIVL SSVDPEKDFR ESMVEMIMEN KMREQKDLED LLACYLSLNS SEYHDVIIKA FENTWLHLTQ GLSISL

Arabidopsis Description

OFP3Transcription repressor OFP3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVL4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.