Factsheet for TraesCS3D01G339100.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G377200.1	Wheat	mitochondrion, nucleus	95.37	96.69
TraesCS3A01G345100.1	Wheat	nucleus	94.28	95.58
HORVU3Hr1G081260.2	Barley	mitochondrion	89.65	83.93
Os01t0823500-01	Rice	nucleus	75.75	73.35
Zm00001d012498_P001	Maize	nucleus	65.67	66.76
Zm00001d043046_P001	Maize	peroxisome	65.67	65.49
KXG33624	Sorghum	nucleus	69.75	47.15
TraesCS1D01G299500.1	Wheat	nucleus	40.05	39.52
TraesCS2D01G390300.1	Wheat	mitochondrion	20.98	30.2
TraesCS2D01G105600.1	Wheat	nucleus	17.98	23.91
TraesCS3D01G289200.1	Wheat	nucleus	17.98	22.3
TraesCS1D01G275100.1	Wheat	plastid	13.08	20.96
TraesCS1D01G340300.1	Wheat	nucleus	19.35	20.58
TraesCS4D01G171100.1	Wheat	nucleus, plastid	16.89	20.33
TraesCS4D01G316300.1	Wheat	nucleus, plastid	11.72	19.03
TraesCS3D01G368500.1	Wheat	plastid	11.44	18.5
TraesCS4D01G262000.1	Wheat	mitochondrion	13.62	17.99
TraesCS1D01G191500.1	Wheat	mitochondrion	11.99	17.89
TraesCS3D01G159700.1	Wheat	mitochondrion, nucleus	14.71	15.38
TraesCS3D01G227100.1	Wheat	nucleus	13.35	14.76
TraesCS6D01G239400.1	Wheat	plastid	11.72	14.53
TraesCS2D01G394400.1	Wheat	mitochondrion	14.44	13.87

Protein Annotations

MapMan:15.5.37	InterPro:DNA_bnd_dom_ovate	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045892
InterPro:IPR006458	InterPro:Ovate	InterPro:Ovate_C	PFAM:PF04844	PFAM:PF13724	PFscan:PS51754
PANTHER:PTHR33057	PANTHER:PTHR33057:SF37	TIGRFAMs:TIGR01568	EnsemblPlantsGene:TraesCS3D01G339100	EnsemblPlants:TraesCS3D01G339100.1	SEG:seg

Description

No Description!

Coordinates

chr3D:-:452240036..452241139

Molecular Weight (calculated)

39677.4 Da

IEP (calculated)

10.720

GRAVY (calculated)

-0.582

Length

367 amino acids

Sequence
(BLAST)

001: MGRHKFRLSD MIPNAWFFKL RDMRGAARGG GGGAGSPGGA SRAGRAGRAP STPHRASYYY TPRAGDTVGS PLHPPRASDA QFPPLPLSPP RRSSKRRHRR
101: RSVKLAPSLS GSSVVSSPVS TGCRCRRKPE LVVVQAPDTP PCRLDKFVGY DNDGDSADSG EALKKPTVAV LGDGGLGGKL ITSATDIIID LRTKKRPDKV
201: LLPPIVTRPK PARRTPEELL DLEDKHIDTL ARAAQRATTP FSDEQSKAAK PRRSVSSSAR RLRTRGNTPR VASCKKSKPP APAPAPSPAR EKTPPLAESF
301: AVVKSSRDPR RDFRESMEEM IAENGICTAA DLEDLLACYL SLNAAEYHDL IVDVFEHIWA GLADISM

Best Arabidopsis Sequence Match ( AT1G06920.1 )
(BLAST)

001: MRNYKLRLSV MSPSEWFHKL KNMTKPRKKH SLPLYSINTT KKRKPSSESK SLPYSSTSYF FNRSRSRTSF ESRILQISPR NSLHNIQSKR KTVYKPSPPS
101: SSIVSAGFNK TFHQSHDSLS ASSNLKVISS EDDIIIDMNN RDFKKKTFKE ITKFDSTEKA CRASNRTKET HIPHHLSVKV SKEKEDEEED ACRTKKKHQK
201: TLVSSGRRSS AKSPRIKLRA RSPRIQVSPR RSKSRSQNKQ ILDSFAVIKS SIDPSKDFRE SMVEMIAENN IRTSNDMEDL LVCYLTLNPK EYHDLIIKVF
301: VQVWLEVINS TFASK

Arabidopsis Description

OFP4Transcription repressor OFP4 [Source:UniProtKB/Swiss-Prot;Acc:F4HNU8]
SUBAcon: [mitochondrion,plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.