Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G151800.1 | Wheat | nucleus, plastid | 97.44 | 96.88 |
| TraesCS3B01G178800.1 | Wheat | nucleus | 96.01 | 95.2 |
| HORVU3Hr1G030870.1 | Barley | nucleus | 91.17 | 89.39 |
| Os01t0226700-01 | Rice | mitochondrion, nucleus | 54.42 | 76.4 |
| EES02214 | Sorghum | mitochondrion, nucleus | 66.67 | 61.9 |
| KXG33158 | Sorghum | cytosol, plastid | 24.22 | 61.15 |
| KXG20752 | Sorghum | cytosol, nucleus | 29.34 | 58.19 |
| Zm00001d039313_P001 | Maize | mitochondrion | 61.54 | 57.29 |
| GSMUA_Achr11P... | Banana | nucleus | 20.23 | 45.22 |
| GSMUA_Achr2P19920_001 | Banana | nucleus | 23.36 | 42.71 |
| GSMUA_Achr8P15960_001 | Banana | nucleus | 32.48 | 32.11 |
| CDY44933 | Canola | mitochondrion | 18.23 | 31.07 |
| Bra020055.1-P | Field mustard | mitochondrion | 18.23 | 31.07 |
| CDY42284 | Canola | mitochondrion | 17.66 | 29.95 |
| CDY58970 | Canola | mitochondrion | 18.23 | 29.91 |
| CDX92512 | Canola | mitochondrion | 18.23 | 29.91 |
| AT5G19650.1 | Thale cress | mitochondrion, nucleus | 18.52 | 29.41 |
| Bra002252.1-P | Field mustard | mitochondrion | 17.66 | 29.11 |
| TraesCS3D01G227100.1 | Wheat | nucleus | 26.78 | 28.31 |
| KRH60283 | Soybean | mitochondrion, nucleus | 21.65 | 26.67 |
| KRH41574 | Soybean | mitochondrion, nucleus | 21.65 | 25.94 |
| PGSC0003DMT400000838 | Potato | nucleus | 19.09 | 23.93 |
| TraesCS4D01G262000.1 | Wheat | mitochondrion | 18.8 | 23.74 |
| TraesCS1D01G275100.1 | Wheat | plastid | 15.1 | 23.14 |
| TraesCS1D01G191500.1 | Wheat | mitochondrion | 15.95 | 22.76 |
| TraesCS3D01G368500.1 | Wheat | plastid | 14.24 | 22.03 |
| TraesCS4D01G316300.1 | Wheat | nucleus, plastid | 12.54 | 19.47 |
| TraesCS2D01G390300.1 | Wheat | mitochondrion | 13.68 | 18.82 |
| TraesCS6D01G239400.1 | Wheat | plastid | 13.96 | 16.55 |
| TraesCS1D01G340300.1 | Wheat | nucleus | 14.81 | 15.07 |
| TraesCS3D01G289200.1 | Wheat | nucleus | 12.54 | 14.86 |
| TraesCS3D01G339100.1 | Wheat | nucleus | 15.38 | 14.71 |
| TraesCS2D01G394400.1 | Wheat | mitochondrion | 15.1 | 13.87 |
| TraesCS1D01G299500.1 | Wheat | nucleus | 14.24 | 13.44 |
| TraesCS4D01G171100.1 | Wheat | nucleus, plastid | 10.83 | 12.46 |
| TraesCS2D01G105600.1 | Wheat | nucleus | 9.69 | 12.32 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G159700.1 | EnsemblPlantsGene:TraesCS3D01G159700 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045892 | InterPro:IPR006458 | InterPro:Ovate | InterPro:Ovate_C | PANTHER:PTHR33057 |
| PANTHER:PTHR33057:SF69 | PFAM:PF04844 | PFscan:PS51754 | SEG:seg | TIGRFAMs:TIGR01568 | MapMan:15.5.37 |
Description
No Description!
Coordinates
chr3D:+:129397108..129398342
Molecular Weight (calculated)
38141.7 Da
IEP (calculated)
11.260
GRAVY (calculated)
-0.703
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MDHGGGGRSS SRLRDRLARM FRPGSLLRST CNNNTASTSS SSSCSAAAGA AADGVTASKP PPSSACSSSR ALLPADSAIS RDRDSFLTSS RRDYATIVGR
101: TESFSNALDR VHRRAGAAVH SLPPPARFSM HASPLMESKK KSPLHGHRHH RHRLGGRVKG DKSKKMFSNN PYGFSTSDTD GDDVFSSDAD ERSRSDAKKG
201: DAEAFFSSSR SFSFSSDSSE FYSKKKKPKK KSPAAVAPKP PPPPPRARAR GQRRKNRVAS SCDTCGVREG FRPVVSAAEE QVRRGFAVVQ RSRDPYADFR
301: ASMVEMVVSR QMFGAAELER LLRSYLSLNA PRHHPVILQA FSDIWVVLHG G
101: TESFSNALDR VHRRAGAAVH SLPPPARFSM HASPLMESKK KSPLHGHRHH RHRLGGRVKG DKSKKMFSNN PYGFSTSDTD GDDVFSSDAD ERSRSDAKKG
201: DAEAFFSSSR SFSFSSDSSE FYSKKKKPKK KSPAAVAPKP PPPPPRARAR GQRRKNRVAS SCDTCGVREG FRPVVSAAEE QVRRGFAVVQ RSRDPYADFR
301: ASMVEMVVSR QMFGAAELER LLRSYLSLNA PRHHPVILQA FSDIWVVLHG G
001: MTKRFKLKIS RILSFKSCRL KDPSSLPFNP VSSSLRRTSP LVNSSADVTT VPQRRRSSFR LHVLTVFGCG RSSTPLDVDL RNSPVLSPPQ TPTFQWESEG
101: KWHVIAQVTE EEYETPRRKI YNGGSEKDNR RRLKKKEKSN SRRRGSISSA EEETDRESLL PSSTNLSPEY SSSELPRVTR RPRQLLKKAV IEEESESSSP
201: PPSPARLSSF VQRLMPCTMA AAVMVEGVAV VKKSEDPYED FKGSMMEMIV EKKMFEVAEL EQLLSCFLSL NAKRHHRAIV RAFSEIWVAL FSGGSGGGRR
301: SSSFSSVRLS DYDEC
101: KWHVIAQVTE EEYETPRRKI YNGGSEKDNR RRLKKKEKSN SRRRGSISSA EEETDRESLL PSSTNLSPEY SSSELPRVTR RPRQLLKKAV IEEESESSSP
201: PPSPARLSSF VQRLMPCTMA AAVMVEGVAV VKKSEDPYED FKGSMMEMIV EKKMFEVAEL EQLLSCFLSL NAKRHHRAIV RAFSEIWVAL FSGGSGGGRR
301: SSSFSSVRLS DYDEC
Arabidopsis Description
OFP7Transcription repressor OFP7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU65]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.