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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • plastid 2
  • mitochondrion 3
  • nucleus 2
Predictors GFP MS/MS Papers
Winner Takes All:nucleus, plastid
Any Predictor:mitochondrion, nucleus, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4A01G136100.1 Wheat mitochondrion 82.95 91.01
TraesCS4B01G168800.1 Wheat mitochondrion, nucleus, plastid 80.66 89.45
HORVU4Hr1G049960.1 Barley mitochondrion 80.33 87.5
Zm00001d029067_P001 Maize mitochondrion 52.13 56.99
OQU92638 Sorghum mitochondrion 54.1 56.12
Os01t0511400-00 Rice cytosol, extracellular, mitochondrion 9.51 50.0
Os03t0336900-00 Rice plastid 42.95 43.52
TraesCS2D01G105600.1 Wheat nucleus 35.08 38.77
TraesCS3D01G289200.1 Wheat nucleus 20.98 21.62
TraesCS1D01G340300.1 Wheat nucleus 22.95 20.29
TraesCS2D01G390300.1 Wheat mitochondrion 15.74 18.82
TraesCS1D01G299500.1 Wheat nucleus 21.31 17.47
TraesCS3D01G368500.1 Wheat plastid 12.79 17.18
TraesCS3D01G339100.1 Wheat nucleus 20.33 16.89
TraesCS4D01G316300.1 Wheat nucleus, plastid 12.13 16.37
TraesCS4D01G262000.1 Wheat mitochondrion 14.1 15.47
TraesCS1D01G191500.1 Wheat mitochondrion 11.8 14.63
TraesCS1D01G275100.1 Wheat plastid 10.49 13.97
TraesCS6D01G239400.1 Wheat plastid 13.44 13.85
TraesCS3D01G227100.1 Wheat nucleus 14.1 12.95
TraesCS2D01G394400.1 Wheat mitochondrion 14.1 11.26
TraesCS3D01G159700.1 Wheat mitochondrion, nucleus 12.46 10.83
Protein Annotations
EnsemblPlants:TraesCS4D01G171100.1EnsemblPlantsGene:TraesCS4D01G171100GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0045892InterPro:IPR006458InterPro:OvateInterPro:Ovate_CPANTHER:PTHR33057
PANTHER:PTHR33057:SF23PFAM:PF04844PFscan:PS51754SEG:segTIGRFAMs:TIGR01568MapMan:15.5.37
Description
No Description!
Coordinates
chr4D:+:297833004..297833921
Molecular Weight (calculated)
32959.6 Da
IEP (calculated)
10.515
GRAVY (calculated)
-0.690
Length
305 amino acids
Sequence
(BLAST)
001: MPASSWFHKL RGRSTRKGKR SPACPPSPTR GSSADAIAFV AASPEWTDQK TSQQGRPPAR PPAACAGYSP NRASYYFPSA DRAPRPDGAL RCIAPRGAAD
101: DDGAALDVRV DVIHRRAGRL GGIDAPPATP ELNLRRIVTR PAAKNDPAES AAVSSSASTP TSAATTPSTC RAWGFHVKPD GRRRRQRGHD DKSTRKEKAA
201: EDAGSRRRRW LYESLVVVKT SSDPERDMAE SMAEMVAANH IGSSEDLEEL LACYLALNAA EHHRAVLAAF RRVWHSGFTS PAKECGTCAI KATSCLHRRR
301: TTPNS
Best Arabidopsis Sequence Match ( AT5G58360.1 )
(BLAST)
001: MKQKMGTHKF RFSDMMPHSW LYKLKGMSRS SRKHHLSSPK HLSSADASSS RKLRDPLRRL SSTAHHPQAS NSPPKSSSFK RKIKRKTVYK PSSRLKLSTS
101: SSLNHRSKSS SSANAISDSA VGSFLDRVSS PSDQNFVHDP EPHSSIDIKD ELSVRKLDDV PEDPSVSPNL SPETAKEPPF EMMTQQKLKK PKAHSSGIKI
201: PTKIVRKKKK ERTSQVSKKK GVVKSFAIVL SSVDPEKDFR ESMVEMIMEN KMREQKDLED LLACYLSLNS SEYHDVIIKA FENTWLHLTQ GLSISL
Arabidopsis Description
OFP3Transcription repressor OFP3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVL4]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.