Factsheet for TraesCS4A01G136100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G168800.1	Wheat	mitochondrion, nucleus, plastid	91.73	92.73
HORVU4Hr1G049960.1	Barley	mitochondrion	91.37	90.71
TraesCS4D01G171100.1	Wheat	nucleus, plastid	91.01	82.95
Zm00001d029067_P001	Maize	mitochondrion	56.47	56.27
OQU92638	Sorghum	mitochondrion	58.63	55.44
Os01t0511400-00	Rice	cytosol, extracellular, mitochondrion	10.79	51.72
Os03t0336900-00	Rice	plastid	48.2	44.52
TraesCS2A01G106000.1	Wheat	nucleus	40.65	40.5
TraesCS3A01G289400.1	Wheat	nucleus	24.46	22.97
TraesCS1A01G338100.1	Wheat	cytosol	25.54	20.7
TraesCS2A01G392200.1	Wheat	mitochondrion	17.99	19.46
TraesCS3A01G345100.1	Wheat	nucleus	23.74	18.23
TraesCS1A01G300100.1	Wheat	mitochondrion	23.38	17.11
TraesCS3A01G376000.1	Wheat	plastid	13.67	16.96
TraesCS5A01G492400.1	Wheat	nucleus	12.95	15.45
TraesCS4A01G041100.1	Wheat	mitochondrion	14.39	14.23
TraesCS1A01G185400.1	Wheat	mitochondrion	12.23	13.82
TraesCS6A01G258000.1	Wheat	plastid	13.31	12.67
TraesCS1A01G275500.1	Wheat	nucleus, plastid	10.43	12.66
TraesCS3A01G228900.1	Wheat	nucleus	15.11	12.65
TraesCS2A01G396600.1	Wheat	mitochondrion, plastid	14.03	10.29
TraesCS3A01G151800.1	Wheat	nucleus, plastid	12.95	10.2

Protein Annotations

EnsemblPlants:TraesCS4A01G136100.1	EnsemblPlantsGene:TraesCS4A01G136100	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0045892	InterPro:IPR006458	InterPro:Ovate	InterPro:Ovate_C	PANTHER:PTHR33057
PANTHER:PTHR33057:SF23	PFAM:PF04844	PFscan:PS51754	SEG:seg	TIGRFAMs:TIGR01568	MapMan:15.5.37

Description

No Description!

Coordinates

chr4A:-:189669960..189670796

Molecular Weight (calculated)

30284.6 Da

IEP (calculated)

11.058

GRAVY (calculated)

-0.649

Length

278 amino acids

Sequence
(BLAST)

001: MPASSWFHKL RGRSTRKGRR SAACPPSPTR GSSADAIAFV AASAEWTDQQ TSQQGRPPAR PPAACAGYSP NRASYYFPSA DRGALRCIAP RAADDDDGAA
101: LDVRVDVIHR RAGRLGGIDA PPATPELNLR RIVTRPAAKN DPAESVAVSS STGTPTSAAT TPSTCRARGF HVKPAGRRRR RGHDDKSARK EKAAEDAGSR
201: RRRWLYESLV VVKTSSDPER EMAESMAEMM AANRIRSSED LEELLACYLA LNAAEHHRAV VAAFRRVWLH IAGQRIRH

Best Arabidopsis Sequence Match ( AT5G58360.1 )
(BLAST)

001: MKQKMGTHKF RFSDMMPHSW LYKLKGMSRS SRKHHLSSPK HLSSADASSS RKLRDPLRRL SSTAHHPQAS NSPPKSSSFK RKIKRKTVYK PSSRLKLSTS
101: SSLNHRSKSS SSANAISDSA VGSFLDRVSS PSDQNFVHDP EPHSSIDIKD ELSVRKLDDV PEDPSVSPNL SPETAKEPPF EMMTQQKLKK PKAHSSGIKI
201: PTKIVRKKKK ERTSQVSKKK GVVKSFAIVL SSVDPEKDFR ESMVEMIMEN KMREQKDLED LLACYLSLNS SEYHDVIIKA FENTWLHLTQ GLSISL

Arabidopsis Description

OFP3Transcription repressor OFP3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVL4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.