Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G239400.1 | Wheat | plastid | 93.84 | 92.57 |
| HORVU6Hr1G065900.1 | Barley | mitochondrion, plastid | 93.84 | 92.26 |
| TraesCS6B01G267100.1 | Wheat | plastid | 93.49 | 91.61 |
| Os02t0679700-01 | Rice | plastid | 62.67 | 65.12 |
| OQU85631 | Sorghum | plastid | 58.22 | 55.19 |
| Zm00001d017606_P001 | Maize | plastid | 53.77 | 53.77 |
| GSMUA_Achr1P03740_001 | Banana | plastid | 28.77 | 48.28 |
| Os01t0831800-00 | Rice | plastid | 43.49 | 45.85 |
| GSMUA_Achr11P... | Banana | plastid | 23.97 | 40.7 |
| TraesCS2A01G396600.1 | Wheat | mitochondrion, plastid | 50.68 | 39.05 |
| GSMUA_Achr8P12190_001 | Banana | plastid | 25.68 | 38.27 |
| TraesCS1A01G185400.1 | Wheat | mitochondrion | 32.19 | 38.21 |
| GSMUA_Achr5P20250_001 | Banana | plastid | 27.05 | 38.16 |
| Solyc11g068780.1.1 | Tomato | cytosol | 16.1 | 34.31 |
| PGSC0003DMT400050511 | Potato | cytosol | 16.1 | 33.81 |
| AT3G52525.1 | Thale cress | plastid | 17.12 | 31.45 |
| KRH32810 | Soybean | mitochondrion | 18.84 | 31.07 |
| KRH67981 | Soybean | mitochondrion | 20.21 | 31.05 |
| KRG96237 | Soybean | mitochondrion | 20.21 | 30.89 |
| TraesCS5A01G492400.1 | Wheat | nucleus | 23.97 | 30.04 |
| KRH72226 | Soybean | mitochondrion | 17.81 | 29.89 |
| AT2G36026.1 | Thale cress | nucleus, plastid | 18.49 | 29.51 |
| VIT_08s0007g02550.t01 | Wine grape | mitochondrion, plastid | 18.15 | 28.49 |
| KRH22646 | Soybean | mitochondrion, nucleus | 17.81 | 28.26 |
| CDX75076 | Canola | nucleus | 17.81 | 27.96 |
| Bra017266.1-P | Field mustard | nucleus | 17.81 | 27.96 |
| Bra005303.1-P | Field mustard | mitochondrion, plastid | 17.81 | 27.96 |
| CDY43753 | Canola | nucleus | 17.81 | 27.96 |
| Solyc10g082050.1.1 | Tomato | mitochondrion | 16.78 | 27.53 |
| KRH26670 | Soybean | mitochondrion | 17.47 | 27.42 |
| PGSC0003DMT400042334 | Potato | mitochondrion | 17.12 | 27.17 |
| PGSC0003DMT400072347 | Potato | mitochondrion, plastid | 17.47 | 26.98 |
| Solyc01g007800.2.1 | Tomato | mitochondrion | 16.78 | 26.92 |
| KRH30374 | Soybean | nucleus, plastid | 16.78 | 24.87 |
| KRH25295 | Soybean | nucleus, plastid | 16.44 | 24.62 |
| TraesCS3A01G376000.1 | Wheat | plastid | 16.44 | 21.43 |
| TraesCS1A01G275500.1 | Wheat | nucleus, plastid | 15.75 | 20.09 |
| TraesCS4A01G041100.1 | Wheat | mitochondrion | 15.75 | 16.37 |
| TraesCS3A01G289400.1 | Wheat | nucleus | 15.07 | 14.86 |
| TraesCS2A01G392200.1 | Wheat | mitochondrion | 13.01 | 14.79 |
| TraesCS2A01G106000.1 | Wheat | nucleus | 13.36 | 13.98 |
| TraesCS3A01G151800.1 | Wheat | nucleus, plastid | 16.78 | 13.88 |
| TraesCS3A01G228900.1 | Wheat | nucleus | 15.75 | 13.86 |
| TraesCS4A01G136100.1 | Wheat | mitochondrion | 12.67 | 13.31 |
| TraesCS1A01G338100.1 | Wheat | cytosol | 14.38 | 12.24 |
| TraesCS1A01G300100.1 | Wheat | mitochondrion | 15.07 | 11.58 |
| TraesCS3A01G345100.1 | Wheat | nucleus | 14.04 | 11.33 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G258000.1 | EnsemblPlantsGene:TraesCS6A01G258000 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045892 | InterPro:IPR006458 | InterPro:Ovate | InterPro:Ovate_C | PANTHER:PTHR33057 |
| PANTHER:PTHR33057:SF6 | PFAM:PF04844 | PFscan:PS51754 | SEG:seg | TIGRFAMs:TIGR01568 | MapMan:15.5.37 |
Description
No Description!
Coordinates
chr6A:+:480310345..480311223
Molecular Weight (calculated)
31187.5 Da
IEP (calculated)
8.676
GRAVY (calculated)
-0.551
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSPGISVRK PHGGAGFALG CGCKDAKSVS VVSASPSPSG AGTSTTTETR RRGGRANPSA STTTDTLTSA SSSSLLWEDA VAEFDCGDDG HFKRESSAAT
101: QSFSGLLREL NELEQSVVSW GRKSHRSRDK KASTPPLEHK QATMKSGDLK TGGAKDRRAG DSVEPGTTVE ACVEVGLDGS VAVVKQSEDP LSDFRQSMVQ
201: MIVENGIIAG EELRQMLRRF LTLNAPHHHD VILRAFAEIW DAVFAASYVP APATAPPHKH TRREEPAAGR PPMPPRTPPR HHHSPSPSAW RV
101: QSFSGLLREL NELEQSVVSW GRKSHRSRDK KASTPPLEHK QATMKSGDLK TGGAKDRRAG DSVEPGTTVE ACVEVGLDGS VAVVKQSEDP LSDFRQSMVQ
201: MIVENGIIAG EELRQMLRRF LTLNAPHHHD VILRAFAEIW DAVFAASYVP APATAPPHKH TRREEPAAGR PPMPPRTPPR HHHSPSPSAW RV
001: MATKSKKKIL KTVSVVDISC GNCIKPTFAS IFNFFSKKPK RPSSTYRHCH SSISSATPSS TPLATASVAV EKDSDDPYLD FRQSMLQMIL ENQIYSKDEL
101: RELLQCFLSL NSHYHHGIIV RAFSEIWEDV SSAAASAVEA SPLITRHVSR ASRDYYNYY
101: RELLQCFLSL NSHYHHGIIV RAFSEIWEDV SSAAASAVEA SPLITRHVSR ASRDYYNYY
Arabidopsis Description
OFP6Transcription repressor OFP6 [Source:UniProtKB/Swiss-Prot;Acc:Q3EAL1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.