Factsheet for TraesCS3A01G345100.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G377200.1	Wheat	mitochondrion, nucleus	95.03	95.03
TraesCS3D01G339100.1	Wheat	nucleus	95.58	94.28
HORVU3Hr1G081260.2	Barley	mitochondrion	90.88	83.93
Os01t0823500-01	Rice	nucleus	75.97	72.56
Zm00001d012498_P001	Maize	nucleus	66.3	66.48
Zm00001d043046_P001	Maize	peroxisome	66.85	65.76
KXG33624	Sorghum	nucleus	70.44	46.96
TraesCS1A01G300100.1	Wheat	mitochondrion	40.61	38.68
TraesCS2A01G392200.1	Wheat	mitochondrion	21.27	29.96
TraesCS2A01G106000.1	Wheat	nucleus	19.34	25.09
TraesCS4A01G136100.1	Wheat	mitochondrion	18.23	23.74
TraesCS3A01G289400.1	Wheat	nucleus	17.96	21.96
TraesCS1A01G338100.1	Wheat	cytosol	19.61	20.7
TraesCS1A01G275500.1	Wheat	nucleus, plastid	12.98	20.52
TraesCS3A01G376000.1	Wheat	plastid	11.88	19.2
TraesCS1A01G185400.1	Wheat	mitochondrion	12.43	18.29
TraesCS4A01G041100.1	Wheat	mitochondrion	13.81	17.79
TraesCS5A01G492400.1	Wheat	nucleus	11.33	17.6
TraesCS3A01G228900.1	Wheat	nucleus	13.54	14.76
TraesCS3A01G151800.1	Wheat	nucleus, plastid	14.36	14.73
TraesCS6A01G258000.1	Wheat	plastid	11.33	14.04
TraesCS2A01G396600.1	Wheat	mitochondrion, plastid	14.64	13.98

Protein Annotations

MapMan:15.5.37	InterPro:DNA_bnd_dom_ovate	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045892
InterPro:IPR006458	InterPro:Ovate	InterPro:Ovate_C	PFAM:PF04844	PFAM:PF13724	PFscan:PS51754
PANTHER:PTHR33057	PANTHER:PTHR33057:SF37	TIGRFAMs:TIGR01568	EnsemblPlantsGene:TraesCS3A01G345100	EnsemblPlants:TraesCS3A01G345100.1	SEG:seg

Description

No Description!

Coordinates

chr3A:-:594590481..594591569

Molecular Weight (calculated)

39334.0 Da

IEP (calculated)

10.813

GRAVY (calculated)

-0.595

Length

362 amino acids

Sequence
(BLAST)

001: MGRHKFRLSD MIPNAWFFKL RDMRGAVRGG GGGAASPGGA SRAGRAGRAP STPHRASYYY TPRAGDAVGS PLHPPRASDA QFPPLPLSPP RRSSKRRHRR
101: RSVKLAPSAS GSSVVSSPVS TGCRCRRKPE LVVVQAPDTP PCRLDNFVGY DDSGDETLKK PTVAVLGDGG LGGKLITSAT DIIIDLRTKK RPDTDRVLLP
201: PIVTRPKPAR RTPEELLDLE DKHIDTLARA AQRATTPFSD EQSKAAKPRR SVSSSARRLK TRGNTPRVAS CKKSKPPAPS PAPAREKTPP LAESFAVVKT
301: SRDPRRDFRE SMEEMIAENG IRTAADLEDL LACYLSLNAA EYHDLIVDVF EHIWAGLADI SM

Best Arabidopsis Sequence Match ( AT1G06920.1 )
(BLAST)

001: MRNYKLRLSV MSPSEWFHKL KNMTKPRKKH SLPLYSINTT KKRKPSSESK SLPYSSTSYF FNRSRSRTSF ESRILQISPR NSLHNIQSKR KTVYKPSPPS
101: SSIVSAGFNK TFHQSHDSLS ASSNLKVISS EDDIIIDMNN RDFKKKTFKE ITKFDSTEKA CRASNRTKET HIPHHLSVKV SKEKEDEEED ACRTKKKHQK
201: TLVSSGRRSS AKSPRIKLRA RSPRIQVSPR RSKSRSQNKQ ILDSFAVIKS SIDPSKDFRE SMVEMIAENN IRTSNDMEDL LVCYLTLNPK EYHDLIIKVF
301: VQVWLEVINS TFASK

Arabidopsis Description

OFP4Transcription repressor OFP4 [Source:UniProtKB/Swiss-Prot;Acc:F4HNU8]
SUBAcon: [mitochondrion,plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.