Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G159700.1 | Wheat | mitochondrion, nucleus | 96.88 | 97.44 |
| TraesCS3B01G178800.1 | Wheat | nucleus | 95.75 | 95.48 |
| HORVU3Hr1G030870.1 | Barley | nucleus | 91.22 | 89.94 |
| Os01t0226700-01 | Rice | mitochondrion, nucleus | 54.11 | 76.4 |
| EES02214 | Sorghum | mitochondrion, nucleus | 67.42 | 62.96 |
| KXG33158 | Sorghum | cytosol, plastid | 24.08 | 61.15 |
| KXG20752 | Sorghum | cytosol, nucleus | 29.18 | 58.19 |
| Zm00001d039313_P001 | Maize | mitochondrion | 61.47 | 57.56 |
| GSMUA_Achr11P... | Banana | nucleus | 20.11 | 45.22 |
| GSMUA_Achr2P19920_001 | Banana | nucleus | 23.51 | 43.23 |
| GSMUA_Achr8P15960_001 | Banana | nucleus | 32.29 | 32.11 |
| Bra020055.1-P | Field mustard | mitochondrion | 17.85 | 30.58 |
| CDY44933 | Canola | mitochondrion | 17.85 | 30.58 |
| CDY42284 | Canola | mitochondrion | 17.85 | 30.43 |
| TraesCS3A01G228900.1 | Wheat | nucleus | 27.76 | 29.52 |
| CDY58970 | Canola | mitochondrion | 17.85 | 29.44 |
| CDX92512 | Canola | mitochondrion | 17.85 | 29.44 |
| AT5G19650.1 | Thale cress | mitochondrion, nucleus | 18.13 | 28.96 |
| Bra002252.1-P | Field mustard | mitochondrion | 17.28 | 28.64 |
| KRH60283 | Soybean | mitochondrion, nucleus | 21.25 | 26.32 |
| KRH41574 | Soybean | mitochondrion, nucleus | 21.25 | 25.6 |
| PGSC0003DMT400000838 | Potato | nucleus | 18.98 | 23.93 |
| TraesCS4A01G041100.1 | Wheat | mitochondrion | 18.98 | 23.84 |
| TraesCS1A01G275500.1 | Wheat | nucleus, plastid | 15.3 | 23.58 |
| TraesCS1A01G185400.1 | Wheat | mitochondrion | 15.86 | 22.76 |
| TraesCS3A01G376000.1 | Wheat | plastid | 14.16 | 22.32 |
| TraesCS2A01G392200.1 | Wheat | mitochondrion | 14.45 | 19.84 |
| TraesCS5A01G492400.1 | Wheat | nucleus | 12.18 | 18.45 |
| TraesCS6A01G258000.1 | Wheat | plastid | 13.88 | 16.78 |
| TraesCS1A01G338100.1 | Wheat | cytosol | 14.45 | 14.87 |
| TraesCS3A01G289400.1 | Wheat | nucleus | 12.46 | 14.86 |
| TraesCS3A01G345100.1 | Wheat | nucleus | 14.73 | 14.36 |
| TraesCS2A01G396600.1 | Wheat | mitochondrion, plastid | 15.3 | 14.25 |
| TraesCS1A01G300100.1 | Wheat | mitochondrion | 15.3 | 14.21 |
| TraesCS4A01G136100.1 | Wheat | mitochondrion | 10.2 | 12.95 |
| TraesCS2A01G106000.1 | Wheat | nucleus | 10.2 | 12.9 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G151800.1 | EnsemblPlantsGene:TraesCS3A01G151800 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045892 | InterPro:IPR006458 | InterPro:Ovate | InterPro:Ovate_C | PANTHER:PTHR33057 |
| PANTHER:PTHR33057:SF69 | PFAM:PF04844 | PFscan:PS51754 | SEG:seg | TIGRFAMs:TIGR01568 | MapMan:15.5.37 |
Description
No Description!
Coordinates
chr3A:+:141910154..141911215
Molecular Weight (calculated)
38211.8 Da
IEP (calculated)
11.170
GRAVY (calculated)
-0.653
Length
353 amino acids
Sequence
(BLAST)
(BLAST)
001: MDHGGGGGRS SSRLRDRLAR MFRPGSLLRS TCNNNTASTS SSSSCSAAVG AAADGVTASK PPPSSVCSSS RALLAADSAI SRDRDSFLTS SRRDYATIVG
101: RTESFSNALD RVHRRAGAAV HSLPPPARFS MHASPLMESK KKSPLHGSHR HHRHRLGGRV KGDKSKKLLS NNPYGFSTSD TDGDDVFSSD ADEHGRSDAK
201: KGDAEAFFSS SRSFSFSSDS SEFYSKKKKP KKSPAAVAPK PPPPPPPRAR ARGQRRKNRV ASSCDTCGVR EGFRPVVSAA EEQVRRGFAV VQRSRDPYAD
301: FRASMVEMVV SRQMFGAVEL ERLLRSYLSL NAPRHHPVIL QAFSDIWVVL HGG
101: RTESFSNALD RVHRRAGAAV HSLPPPARFS MHASPLMESK KKSPLHGSHR HHRHRLGGRV KGDKSKKLLS NNPYGFSTSD TDGDDVFSSD ADEHGRSDAK
201: KGDAEAFFSS SRSFSFSSDS SEFYSKKKKP KKSPAAVAPK PPPPPPPRAR ARGQRRKNRV ASSCDTCGVR EGFRPVVSAA EEQVRRGFAV VQRSRDPYAD
301: FRASMVEMVV SRQMFGAVEL ERLLRSYLSL NAPRHHPVIL QAFSDIWVVL HGG
001: MTKRFKLKIS RILSFKSCRL KDPSSLPFNP VSSSLRRTSP LVNSSADVTT VPQRRRSSFR LHVLTVFGCG RSSTPLDVDL RNSPVLSPPQ TPTFQWESEG
101: KWHVIAQVTE EEYETPRRKI YNGGSEKDNR RRLKKKEKSN SRRRGSISSA EEETDRESLL PSSTNLSPEY SSSELPRVTR RPRQLLKKAV IEEESESSSP
201: PPSPARLSSF VQRLMPCTMA AAVMVEGVAV VKKSEDPYED FKGSMMEMIV EKKMFEVAEL EQLLSCFLSL NAKRHHRAIV RAFSEIWVAL FSGGSGGGRR
301: SSSFSSVRLS DYDEC
101: KWHVIAQVTE EEYETPRRKI YNGGSEKDNR RRLKKKEKSN SRRRGSISSA EEETDRESLL PSSTNLSPEY SSSELPRVTR RPRQLLKKAV IEEESESSSP
201: PPSPARLSSF VQRLMPCTMA AAVMVEGVAV VKKSEDPYED FKGSMMEMIV EKKMFEVAEL EQLLSCFLSL NAKRHHRAIV RAFSEIWVAL FSGGSGGGRR
301: SSSFSSVRLS DYDEC
Arabidopsis Description
OFP7Transcription repressor OFP7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU65]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.