CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

plastid 2
mitochondrion 4
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG33158	Sorghum	cytosol, plastid	33.07	89.93
KXG20752	Sorghum	cytosol, nucleus	41.53	88.7
Os01t0226700-01	Rice	mitochondrion, nucleus	49.21	74.4
Zm00001d039313_P001	Maize	mitochondrion	69.84	70.03
TraesCS3A01G151800.1	Wheat	nucleus, plastid	62.96	67.42
TraesCS3D01G159700.1	Wheat	mitochondrion, nucleus	61.9	66.67
HORVU3Hr1G030870.1	Barley	nucleus	62.96	66.48
TraesCS3B01G178800.1	Wheat	nucleus	62.17	66.38
GSMUA_Achr11P...	Banana	nucleus	19.84	47.77
EES17897	Sorghum	nucleus, plastid	35.19	44.04
GSMUA_Achr2P19920_001	Banana	nucleus	21.69	42.71
GSMUA_Achr8P15960_001	Banana	nucleus	30.16	32.11
OQU78505	Sorghum	nucleus	28.57	30.0
Bra020055.1-P	Field mustard	mitochondrion	15.87	29.13
CDY44933	Canola	mitochondrion	15.87	29.13
EES03313	Sorghum	nucleus	31.75	28.92
CDY42284	Canola	mitochondrion	15.61	28.5
AT5G19650.1	Thale cress	mitochondrion, nucleus	16.4	28.05
CDX92512	Canola	mitochondrion	15.87	28.04
CDY58970	Canola	mitochondrion	15.87	28.04
Bra002252.1-P	Field mustard	mitochondrion	15.34	27.23
KRH60283	Soybean	mitochondrion, nucleus	20.37	27.02
KRH41574	Soybean	mitochondrion, nucleus	20.37	26.28
EES03931	Sorghum	plastid	15.61	25.0
EER92692	Sorghum	mitochondrion	20.11	24.36
PGSC0003DMT400000838	Potato	nucleus	17.99	24.29
EES18304	Sorghum	nucleus, plastid	14.29	23.58
EER94592	Sorghum	mitochondrion	15.61	20.92
EER92948	Sorghum	plastid	12.43	18.43
OQU85631	Sorghum	plastid	14.55	17.86
EES17993	Sorghum	nucleus, plastid	11.38	17.41
OQU90474	Sorghum	mitochondrion	10.85	14.8
EES19813	Sorghum	nucleus	12.96	14.63
EES11304	Sorghum	plastid	15.08	13.94
EES18387	Sorghum	mitochondrion	13.76	13.79
EES01480	Sorghum	nucleus	12.7	13.56
OQU92638	Sorghum	mitochondrion	10.05	12.93
KXG33624	Sorghum	nucleus	13.23	9.21

Protein Annotations

MapMan:15.5.37	EntrezGene:8081367	UniProt:C5XK98	EnsemblPlants:EES02214	ProteinID:EES02214	ProteinID:EES02214.1
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045892
InterPro:IPR006458	InterPro:Ovate	InterPro:Ovate_C	PFAM:PF04844	PFscan:PS51754	PANTHER:PTHR33057
PANTHER:PTHR33057:SF69	EnsemblPlantsGene:SORBI_3003G010700	TIGRFAMs:TIGR01568	UniParc:UPI0001A84DFD	RefSeq:XP_002457094.1	SEG:seg

Description

hypothetical protein

Coordinates

chr3:-:920348..921970

Molecular Weight (calculated)

40751.7 Da

IEP (calculated)

10.629

GRAVY (calculated)

-0.667

Length

378 amino acids

Sequence
(BLAST)

001: MDHGGGGGRS SSRLRDRLAR MFRPGSLLRS TCNTTAGASS CASSSPVVGG AAAASTTKPP PPPAAASACS SSRALLAADV AGDRDSFLAS SRRDLVGRTE
101: SFSTAVDRLH HHRRRRDVAA QPSRFSVDAP ASVAERNKDK EKKSPRDEYG SHHHPLGGGK CDKTMIRMKL LSNPYGFSSS DDDDADTDVF SSDAEDDLAG
201: RAGCISKRLA GESAETFFSS SRSFSSDSSE FYTKKQKKQT TTTTKTKPPA ASSGKPPKPP RTTMTTAKRG QVHPAVTARR HHRRATSSCD TCGVRDGFRP
301: VVSAAEEQVR RGFAVVKRSR DPYADFRSSM VEMIVGRQLF GPPDMERLLR SYLSLNAPRH HPVILQAFSD IWVVVHGG

Best Arabidopsis Sequence Match ( AT5G19650.1 )
(BLAST)

001: MEKRMKLRVS RIVRSSLSSC RPRDLYDVVE TCAVTSKATS SERFFVTKAK TKTPSRPKSH ASSCPRASPI FPPNPFYEES RSFRDLRKKV KTNRKQRSQF
101: GSDPLFASRF KSTGSWYWSC SEEEDEGDKE ESEDDDSDTL FSSRSFSSDS SKAESFAVVK KSKDPYEDFR TSMVEMIVER QIFAPAELQQ LLQCFLSLNS
201: RQHHKVIVQV FLEIYATLFS P

Arabidopsis Description

OFP8Transcription repressor OFP8 [Source:UniProtKB/Swiss-Prot;Acc:Q3E9B4]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.