CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029067_P001	Maize	mitochondrion	77.89	82.08
TraesCS4A01G136100.1	Wheat	mitochondrion	55.44	58.63
HORVU4Hr1G049960.1	Barley	mitochondrion	55.1	57.86
TraesCS4B01G168800.1	Wheat	mitochondrion, nucleus, plastid	54.08	57.82
TraesCS4D01G171100.1	Wheat	nucleus, plastid	56.12	54.1
Os01t0511400-00	Rice	cytosol, extracellular, mitochondrion	10.54	53.45
Os03t0336900-00	Rice	plastid	45.58	44.52
OQU90474	Sorghum	mitochondrion	38.1	40.43
EES19813	Sorghum	nucleus	24.15	21.19
EES17993	Sorghum	nucleus, plastid	17.01	20.24
EES18387	Sorghum	mitochondrion	24.83	19.36
EES01480	Sorghum	nucleus	23.13	19.21
EES03931	Sorghum	plastid	14.63	18.22
EER92948	Sorghum	plastid	13.61	15.69
KXG20752	Sorghum	cytosol, nucleus	8.84	14.69
EES18304	Sorghum	nucleus, plastid	10.88	13.97
EER92692	Sorghum	mitochondrion	14.63	13.78
OQU78505	Sorghum	nucleus	15.99	13.06
OQU85631	Sorghum	plastid	13.61	12.99
KXG33158	Sorghum	cytosol, plastid	6.12	12.95
KXG33624	Sorghum	nucleus	21.09	11.42
EER94592	Sorghum	mitochondrion	10.88	11.35
EES03313	Sorghum	nucleus	15.65	11.08
EES17897	Sorghum	nucleus, plastid	10.88	10.6
EES02214	Sorghum	mitochondrion, nucleus	12.93	10.05
EES11304	Sorghum	plastid	12.93	9.29

Protein Annotations

MapMan:15.5.37	EntrezGene:8082331	UniProt:A0A1Z5S9R0	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045892
InterPro:IPR000048	InterPro:IPR006458	InterPro:IQ_motif_EF-hand-BS	EnsemblPlants:OQU92638	ProteinID:OQU92638	ProteinID:OQU92638.1
InterPro:Ovate	InterPro:Ovate_C	PFAM:PF04844	PFscan:PS50096	PFscan:PS51754	PANTHER:PTHR33057
PANTHER:PTHR33057:SF23	EnsemblPlantsGene:SORBI_3001G380100	TIGRFAMs:TIGR01568	UniParc:UPI0001A82A2D	RefSeq:XP_002465308.1	SEG:seg

Description

hypothetical protein

Coordinates

chr1:+:66828303..66829494

Molecular Weight (calculated)

32491.6 Da

IEP (calculated)

10.857

GRAVY (calculated)

-0.630

Length

294 amino acids

Sequence
(BLAST)

001: MPAPKWFQKL RRRRSKQGKQ QSPCRSQCTA AAAEVDAEAD APAPPAQGQQ QCPSLLPAPP CAVSLNRASY YFASADRLRQ DRDLPCAADL LDVRVDVVHR
101: RAGGDRRLGG LDAPPGTPEL KLRRIVTRPV AVAAAASESG GGVSSASATT SAATTPSTRS RGFHVRRQRR RRRRRERDYH DGVAVKKGKA AAKEEGEEDQ
201: VSPPSSSRRV PTQRLRRRRW LYESLVVVKT SSDPERELAE SMSEMVVANG IRSSEDLEEL LACYLALNAA EHHRAVVAAF RHVWLLLDKH RLLI

Best Arabidopsis Sequence Match ( AT5G58360.1 )
(BLAST)

001: MKQKMGTHKF RFSDMMPHSW LYKLKGMSRS SRKHHLSSPK HLSSADASSS RKLRDPLRRL SSTAHHPQAS NSPPKSSSFK RKIKRKTVYK PSSRLKLSTS
101: SSLNHRSKSS SSANAISDSA VGSFLDRVSS PSDQNFVHDP EPHSSIDIKD ELSVRKLDDV PEDPSVSPNL SPETAKEPPF EMMTQQKLKK PKAHSSGIKI
201: PTKIVRKKKK ERTSQVSKKK GVVKSFAIVL SSVDPEKDFR ESMVEMIMEN KMREQKDLED LLACYLSLNS SEYHDVIIKA FENTWLHLTQ GLSISL

Arabidopsis Description

OFP3Transcription repressor OFP3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVL4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.