Factsheet for Zm00001d029067_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU92638	Sorghum	mitochondrion	82.08	77.89
TraesCS4A01G136100.1	Wheat	mitochondrion	56.27	56.47
HORVU4Hr1G049960.1	Barley	mitochondrion	56.63	56.43
TraesCS4B01G168800.1	Wheat	mitochondrion, nucleus, plastid	55.2	56.0
TraesCS4D01G171100.1	Wheat	nucleus, plastid	56.99	52.13
Os01t0511400-00	Rice	cytosol, extracellular, mitochondrion	10.75	51.72
Os03t0336900-00	Rice	plastid	48.39	44.85
Zm00001d007168_P001	Maize	mitochondrion	36.92	44.21
Zm00001d022446_P001	Maize	nucleus	36.56	41.46
Zm00001d038714_P001	Maize	nucleus	25.45	22.54
Zm00001d009993_P001	Maize	nucleus, plastid	20.43	22.01
Zm00001d043470_P001	Maize	mitochondrion, nucleus	24.01	19.82
Zm00001d038473_P001	Maize	mitochondrion	25.81	19.67
Zm00001d043046_P001	Maize	peroxisome	24.73	18.75
Zm00001d012498_P001	Maize	nucleus	22.94	17.73
Zm00001d042752_P001	Maize	nucleus, plastid	14.34	16.26
Zm00001d012282_P001	Maize	nucleus, plastid	13.62	15.38
Zm00001d027453_P001	Maize	plastid	13.26	14.98
Zm00001d000458_P001	Maize	mitochondrion, plastid	14.7	14.24
Zm00001d017606_P001	Maize	plastid	14.7	14.04
Zm00001d038283_P001	Maize	nucleus	11.47	14.04
Zm00001d029718_P001	Maize	mitochondrion	11.47	12.31
Zm00001d026061_P001	Maize	cytosol, mitochondrion, nucleus, plastid	16.49	12.01
Zm00001d037814_P001	Maize	plastid	11.47	11.27
Zm00001d047346_P001	Maize	mitochondrion	10.75	10.91
Zm00001d011410_P001	Maize	nucleus, plastid	15.41	10.78
Zm00001d044167_P001	Maize	mitochondrion, nucleus	16.13	10.56
Zm00001d002594_P001	Maize	cytosol, mitochondrion, nucleus, plastid	14.7	10.33
Zm00001d039313_P001	Maize	mitochondrion	13.62	10.08

Protein Annotations

EntrezGene:100285514	MapMan:15.5.37	UniProt:B6U5V3	EMBL:EU972618	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045892	InterPro:IPR006458	ProteinID:ONL97811.1
InterPro:Ovate	InterPro:Ovate_C	PFAM:PF04844	PFscan:PS51754	PANTHER:PTHR33057	PANTHER:PTHR33057:SF23
TIGRFAMs:TIGR01568	UniParc:UPI000182E70D	EnsemblPlantsGene:Zm00001d029067	EnsemblPlants:Zm00001d029067_P001	EnsemblPlants:Zm00001d029067_T001	SEG:seg

Description

OVATE-transcription factor 4Plant-specific domain TIGR01568 family protein

Coordinates

chr1:-:56999172..57000011

Molecular Weight (calculated)

30592.4 Da

IEP (calculated)

10.731

GRAVY (calculated)

-0.542

Length

279 amino acids

Sequence
(BLAST)

001: MPAPKWFQKL RGRRSKGKQQ GPCARGLAAE DAPAQGQRPS SLPAPCAVSP NRASYYFASA DRARQDRDLP CAADAAAALL DVRVDVVHRR AGDRRLGGLD
101: APPGTPELQL RPIVTRPPVD DASASGGVSS ASATTSAATT PSTRARRFHV SSPMARRRRR RRCDHDSVAI KKGKAAAAEE EEEEGEVSPV PSLRAPTRRR
201: RRRWLYESLV VVKTSSDPER ELAESMSEMV VANGIRSSED LEELLACYLA LNAAEHHRAV VAAFRRIWLL LDKHRLLLI

Best Arabidopsis Sequence Match ( AT5G01840.1 )
(BLAST)

001: MGNNYRFKLS ELIPNAWFYK LRDMSKSKKK NLQSQPNSTT SKKKHHAVPT PTSTTPLSPR PPRRPSHSSK APPSHPPRKS SGNRLRHRAT VDSKSSTTSG
101: DSTTTETGSF SPDFRSDQVL LPDESLTGSW HSPCSSKLSK TATFTPPPEL ELRPIITKTA ATARKTAVNS PAGVRLRMRS PRISVSSSAR RSGSSARRSR
201: AVVKASVDPK RDFKESMEEM IAENKIRATK DLEELLACYL CLNSDEYHAI IINVFKQIWL DLNLPPPHSK

Arabidopsis Description

OFP1Transcription repressor OFP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZW2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.