Factsheet for Zm00001d029718_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d007842_P002
Zm00001d013559_P001
Zm00001d018742_P001
Zm00001d027431_P002
Zm00001d033404_P002
Zm00001d033859_P002
Zm00001d033861_P001
Zm00001d034212_P001
Zm00001d048471_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G52525.1	Zm00001d027431_P002	AT1G62990.1	15781858
AT3G52525.1	Zm00001d048471_P001	AT1G62990.1	15781858
AT3G52525.1	Zm00001d007842_P002	AT4G08150.1	15781858
AT3G52525.1	Zm00001d013559_P001	AT4G08150.1	15781858
AT3G52525.1	Zm00001d018742_P001	AT4G08150.1	15781858
AT3G52525.1	Zm00001d033404_P002	AT4G08150.1	15781858
AT3G52525.1	Zm00001d033859_P002	AT4G08150.1	15781858
AT3G52525.1	Zm00001d033861_P001	AT4G08150.1	15781858
AT3G52525.1	Zm00001d034212_P001	AT4G08150.1	15781858

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER94592	Sorghum	mitochondrion	79.23	73.05
Zm00001d047346_P001	Maize	mitochondrion	75.0	70.91
TraesCS1B01G193300.1	Wheat	mitochondrion	60.38	63.82
TraesCS1D01G191500.1	Wheat	mitochondrion	60.0	63.41
TraesCS1A01G185400.1	Wheat	mitochondrion	60.0	63.41
HORVU1Hr1G049440.1	Barley	mitochondrion	59.23	61.85
Os10t0532600-01	Rice	mitochondrion	61.92	61.22
GSMUA_Achr5P20250_001	Banana	plastid	36.15	45.41
GSMUA_Achr1P03740_001	Banana	plastid	30.38	45.4
GSMUA_Achr11P...	Banana	plastid	30.0	45.35
GSMUA_Achr8P12190_001	Banana	plastid	31.15	41.33
Solyc11g068780.1.1	Tomato	cytosol	21.54	40.88
Zm00001d027453_P001	Maize	plastid	36.92	38.87
PGSC0003DMT400050511	Potato	cytosol	20.38	38.13
AT3G52525.1	Thale cress	plastid	21.54	35.22
Solyc10g082050.1.1	Tomato	mitochondrion	23.46	34.27
KRH72226	Soybean	mitochondrion	22.69	33.91
VIT_08s0007g02550.t01	Wine grape	mitochondrion, plastid	23.85	33.33
Solyc01g007800.2.1	Tomato	mitochondrion	23.08	32.97
PGSC0003DMT400042334	Potato	mitochondrion	23.08	32.61
KRH32810	Soybean	mitochondrion	21.92	32.2
Zm00001d017606_P001	Maize	plastid	36.15	32.19
KRG96237	Soybean	mitochondrion	23.46	31.94
PGSC0003DMT400072347	Potato	mitochondrion, plastid	22.69	31.22
CDX75076	Canola	nucleus	22.31	31.18
Bra005303.1-P	Field mustard	mitochondrion, plastid	22.31	31.18
KRH67981	Soybean	mitochondrion	22.69	31.05
AT2G36026.1	Thale cress	nucleus, plastid	21.54	30.6
KRH26670	Soybean	mitochondrion	20.77	29.03
KRH22646	Soybean	mitochondrion, nucleus	20.38	28.8
Bra017266.1-P	Field mustard	nucleus	20.38	28.49
CDY43753	Canola	nucleus	20.38	28.49
KRH25295	Soybean	nucleus, plastid	19.23	25.64
KRH30374	Soybean	nucleus, plastid	18.85	24.87
Zm00001d002594_P001	Maize	cytosol, mitochondrion, nucleus, plastid	37.31	24.43
Zm00001d026061_P001	Maize	cytosol, mitochondrion, nucleus, plastid	35.0	23.76
Zm00001d042752_P001	Maize	nucleus, plastid	21.92	23.17
Zm00001d038283_P001	Maize	nucleus	20.0	22.81
Zm00001d012282_P001	Maize	nucleus, plastid	21.15	22.27
Zm00001d037814_P001	Maize	plastid	19.62	17.96
Zm00001d000458_P001	Maize	mitochondrion, plastid	18.85	17.01
Zm00001d009993_P001	Maize	nucleus, plastid	16.54	16.6
Zm00001d039313_P001	Maize	mitochondrion	23.08	15.92
Zm00001d007168_P001	Maize	mitochondrion	12.69	14.16
Zm00001d038714_P001	Maize	nucleus	16.15	13.33
Zm00001d044167_P001	Maize	mitochondrion, nucleus	21.54	13.15
Zm00001d011410_P001	Maize	nucleus, plastid	20.0	13.03
Zm00001d022446_P001	Maize	nucleus	12.31	13.01
Zm00001d038473_P001	Maize	mitochondrion	17.69	12.57
Zm00001d043470_P001	Maize	mitochondrion, nucleus	16.15	12.43
Zm00001d029067_P001	Maize	mitochondrion	12.31	11.47
Zm00001d043046_P001	Maize	peroxisome	16.15	11.41
Zm00001d012498_P001	Maize	nucleus	15.77	11.36

Protein Annotations

EnsemblPlants:Zm00001d029718_P001	EnsemblPlants:Zm00001d029718_T001	EnsemblPlantsGene:Zm00001d029718	EntrezGene:103637459	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045892	InterPro:IPR006458	InterPro:Ovate
InterPro:Ovate_C	PANTHER:PTHR33057	PANTHER:PTHR33057:SF34	PFAM:PF04844	PFscan:PS51754	ProteinID:ONL99470.1
SEG:seg	TIGRFAMs:TIGR01568	UniParc:UPI0004DEAD03	UniProt:A0A1D6K7D7	MapMan:15.5.37	:

Description

OVATE-transcription factor 5Transcription repressor OFP6

Coordinates

chr1:+:83823527..83824309

Molecular Weight (calculated)

27738.7 Da

IEP (calculated)

10.643

GRAVY (calculated)

-0.464

Length

260 amino acids

Sequence
(BLAST)

001: MRVLMSRRRG AGASGGGLCI NKKARLFMCG CGGTKAVSIS DGSSDKSPTA TPQTAASTTP LTGTSTATVT TESTRRGGSR PATTTSSAPS SFSVSSSSVT
101: TTTTTTADDG PSSMEESTPS LSALLRQLHE LERSVRFLHS AGSTDGKQWH RRTVSEGGGG SGRVEESVAV VKESADPLGD FRRSMLQMIV EKEIVGGAEL
201: RELLHRFLSL NSPRHHHLIL RAFAEIWEEV FAGHERAPDF LASSRRCRKK QHQHLATRGA

Best Arabidopsis Sequence Match ( AT2G36026.1 )
(BLAST)

001: MTTGKSKKKK MVLKAVSVVD IGCGNCKFPS LSSFFNPSPK KPRLYSSNYG HCHSSTPTTA SSSSAVPSTS HWFSDTSSSS ATPSAAAVAV EKDSDDPYLD
101: FRQSMLQMIL ENEIYSKNDL RELLHCFLSL NEPYHHGIII RAFSEIWDGV FSAAKRRGDV QESPLVHRHG SRASHRNHYH RSK

Arabidopsis Description

Ovate family protein [Source:UniProtKB/TrEMBL;Acc:B3H6R4]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.