Factsheet for Zm00001d038473_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18387	Sorghum	mitochondrion	80.05	77.72
Zm00001d043046_P001	Maize	peroxisome	46.17	45.92
Zm00001d012498_P001	Maize	nucleus	43.44	44.04
Os05t0477200-01	Rice	nucleus	50.55	43.74
TraesCS1A01G300100.1	Wheat	mitochondrion	42.62	41.05
TraesCS1D01G299500.1	Wheat	nucleus	40.98	40.32
TraesCS1B01G310200.1	Wheat	mitochondrion, plastid	38.25	39.22
HORVU1Hr1G069900.1	Barley	endoplasmic reticulum, mitochondrion, nucleus, plastid	42.9	37.29
Zm00001d009993_P001	Maize	nucleus, plastid	22.95	32.43
Zm00001d022446_P001	Maize	nucleus	18.03	26.83
Zm00001d007168_P001	Maize	mitochondrion	16.94	26.61
Zm00001d029067_P001	Maize	mitochondrion	19.67	25.81
Zm00001d038714_P001	Maize	nucleus	19.95	23.17
Zm00001d043470_P001	Maize	mitochondrion, nucleus	19.95	21.6
Zm00001d042752_P001	Maize	nucleus, plastid	14.21	21.14
Zm00001d038283_P001	Maize	nucleus	12.84	20.61
Zm00001d012282_P001	Maize	nucleus, plastid	13.66	20.24
Zm00001d027453_P001	Maize	plastid	13.39	19.84
Zm00001d029718_P001	Maize	mitochondrion	12.57	17.69
Zm00001d000458_P001	Maize	mitochondrion, plastid	13.66	17.36
Zm00001d037814_P001	Maize	plastid	13.11	16.9
Zm00001d017606_P001	Maize	plastid	13.39	16.78
Zm00001d047346_P001	Maize	mitochondrion	12.57	16.73
Zm00001d039313_P001	Maize	mitochondrion	15.57	15.12
Zm00001d002594_P001	Maize	cytosol, mitochondrion, nucleus, plastid	16.39	15.11
Zm00001d011410_P001	Maize	nucleus, plastid	14.21	13.03
Zm00001d044167_P001	Maize	mitochondrion, nucleus	15.03	12.91
Zm00001d026061_P001	Maize	cytosol, mitochondrion, nucleus, plastid	13.11	12.53

Protein Annotations

EntrezGene:100216587	MapMan:15.5.37	ProteinID:AQK86700.1	UniProt:B4FIR1	EMBL:BT036999	InterPro:DNA_bnd_dom_ovate
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045892	InterPro:IPR006458	EMBL:KJ727793
InterPro:Ovate	InterPro:Ovate_C	PFAM:PF04844	PFAM:PF13724	PFscan:PS51754	PANTHER:PTHR33057
PANTHER:PTHR33057:SF22	TIGRFAMs:TIGR01568	UniParc:UPI00017B6F39	EnsemblPlantsGene:Zm00001d038473	EnsemblPlants:Zm00001d038473_P001	EnsemblPlants:Zm00001d038473_T001
SEG:seg	:	:	:	:	:

Description

OVATE-transcription factor 28Transcription repressor OFP1

Coordinates

chr6:+:158066140..158067240

Molecular Weight (calculated)

40156.3 Da

IEP (calculated)

10.677

GRAVY (calculated)

-0.799

Length

366 amino acids

Sequence
(BLAST)

001: MGRRRFRLAD MMPNSWFYKL RDMRRPRGHP PAVGGSGAAS AMLQSSAAPP QRGARSATRP GSPRHGSVAL PHRTSYYYPT RDRELPAPEP RGAKDENRQV
101: LPQQLSATGY SRRRHGVARG LEAPAGAHDA SRSRRDMYVG VGRDGSDEED VDEVRRPGVI APSEYSVSGK VIASETDIVI DLCSEGTAER VLRPIVTRPA
201: MREVVRYEPK DRHVDVADTS PTRASSASEQ GSKGHPRRSS VSVGRRLRTR VSSPRLASAR SRKNSKPTSA GASPRKTRPA PPPPLAESFA VVKSSADPRR
301: DFRESMEEMI AEKGIRGAAD LEDLLACYLA LNADEHHDLI VEVFEEIWAS LASAKPMKGN RNDGRE

Best Arabidopsis Sequence Match ( AT1G06920.1 )
(BLAST)

001: MRNYKLRLSV MSPSEWFHKL KNMTKPRKKH SLPLYSINTT KKRKPSSESK SLPYSSTSYF FNRSRSRTSF ESRILQISPR NSLHNIQSKR KTVYKPSPPS
101: SSIVSAGFNK TFHQSHDSLS ASSNLKVISS EDDIIIDMNN RDFKKKTFKE ITKFDSTEKA CRASNRTKET HIPHHLSVKV SKEKEDEEED ACRTKKKHQK
201: TLVSSGRRSS AKSPRIKLRA RSPRIQVSPR RSKSRSQNKQ ILDSFAVIKS SIDPSKDFRE SMVEMIAENN IRTSNDMEDL LVCYLTLNPK EYHDLIIKVF
301: VQVWLEVINS TFASK

Arabidopsis Description

OFP4Transcription repressor OFP4 [Source:UniProtKB/Swiss-Prot;Acc:F4HNU8]
SUBAcon: [mitochondrion,plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.