Factsheet for TraesCS1D01G299500.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G300100.1	Wheat	mitochondrion	90.32	88.42
TraesCS1B01G310200.1	Wheat	mitochondrion, plastid	84.68	88.24
HORVU1Hr1G069900.1	Barley	endoplasmic reticulum, mitochondrion, nucleus, plastid	78.23	69.12
EES18387	Sorghum	mitochondrion	42.2	41.64
Zm00001d038473_P001	Maize	mitochondrion	40.32	40.98
TraesCS3D01G339100.1	Wheat	nucleus	39.52	40.05
Os05t0477200-01	Rice	nucleus	43.28	38.06
TraesCS2D01G390300.1	Wheat	mitochondrion	19.89	29.02
TraesCS3D01G289200.1	Wheat	nucleus	17.47	21.96
TraesCS2D01G105600.1	Wheat	nucleus	16.13	21.74
TraesCS4D01G171100.1	Wheat	nucleus, plastid	17.47	21.31
TraesCS3D01G368500.1	Wheat	plastid	12.1	19.82
TraesCS1D01G191500.1	Wheat	mitochondrion	12.63	19.11
TraesCS1D01G275100.1	Wheat	plastid	11.56	18.78
TraesCS1D01G340300.1	Wheat	nucleus	17.2	18.55
TraesCS4D01G316300.1	Wheat	nucleus, plastid	10.48	17.26
TraesCS4D01G262000.1	Wheat	mitochondrion	12.37	16.55
TraesCS3D01G227100.1	Wheat	nucleus	13.44	15.06
TraesCS3D01G159700.1	Wheat	mitochondrion, nucleus	13.44	14.24
TraesCS6D01G239400.1	Wheat	plastid	11.29	14.19
TraesCS2D01G394400.1	Wheat	mitochondrion	14.25	13.87

Protein Annotations

MapMan:15.5.37	InterPro:DNA_bnd_dom_ovate	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045892
InterPro:IPR006458	InterPro:Ovate	InterPro:Ovate_C	PFAM:PF04844	PFAM:PF13724	PFscan:PS51754
PANTHER:PTHR33057	PANTHER:PTHR33057:SF22	TIGRFAMs:TIGR01568	EnsemblPlantsGene:TraesCS1D01G299500	EnsemblPlants:TraesCS1D01G299500.1	SEG:seg

Description

No Description!

Coordinates

chr1D:+:397630209..397631522

Molecular Weight (calculated)

41259.6 Da

IEP (calculated)

11.131

GRAVY (calculated)

-0.910

Length

372 amino acids

Sequence
(BLAST)

001: MVRRKFRLSD MIPNAWFYKL RDMGAHGRGG VGVHHRSSSA RSYQQPPLNW ESSARWSVEA VRQRPSSRWN REVSNDIQPP VTPTKESPHA PLPRRASYYY
101: SSRDRDVPAP PAPKPPRAKE AQSPTRSSRR RHKVDHAPEE RGHARGKEPV VGSLGSSGRR RDMCIKSDGG EPRRPTVTGP GDEGRNVKVI ASQNEIIIDL
201: RDEDTPGRRL RPIVTKPARR RPGPSEQDGS QADLAVATAG ASSASDKSSA SRPRRSSASS SGRRRLKTLS KSPRLAATGR KVNPPSRKWA APPPSLPAPV
301: IVSSYPVVKM SEDPRQDFRE SMEEMISAKR IQDAEDLEDL LACYLSLNDA AHHDLIIDVF EQIWVSLAGA RP

Best Arabidopsis Sequence Match ( AT1G06920.1 )
(BLAST)

001: MRNYKLRLSV MSPSEWFHKL KNMTKPRKKH SLPLYSINTT KKRKPSSESK SLPYSSTSYF FNRSRSRTSF ESRILQISPR NSLHNIQSKR KTVYKPSPPS
101: SSIVSAGFNK TFHQSHDSLS ASSNLKVISS EDDIIIDMNN RDFKKKTFKE ITKFDSTEKA CRASNRTKET HIPHHLSVKV SKEKEDEEED ACRTKKKHQK
201: TLVSSGRRSS AKSPRIKLRA RSPRIQVSPR RSKSRSQNKQ ILDSFAVIKS SIDPSKDFRE SMVEMIAENN IRTSNDMEDL LVCYLTLNPK EYHDLIIKVF
301: VQVWLEVINS TFASK

Arabidopsis Description

OFP4Transcription repressor OFP4 [Source:UniProtKB/Swiss-Prot;Acc:F4HNU8]
SUBAcon: [mitochondrion,plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.