Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G228900.1 | Wheat | nucleus | 93.07 | 93.07 |
| TraesCS3B01G255700.1 | Wheat | nucleus | 93.07 | 92.24 |
| HORVU3Hr1G055980.1 | Barley | nucleus | 85.54 | 84.52 |
| Os01t0625900-01 | Rice | nucleus | 60.54 | 54.92 |
| EES03313 | Sorghum | nucleus | 59.34 | 47.47 |
| Zm00001d011410_P001 | Maize | nucleus, plastid | 56.63 | 47.12 |
| Zm00001d044167_P001 | Maize | mitochondrion, nucleus | 58.73 | 45.77 |
| CDY44933 | Canola | mitochondrion | 16.87 | 27.18 |
| Bra020055.1-P | Field mustard | mitochondrion | 16.87 | 27.18 |
| TraesCS3D01G159700.1 | Wheat | mitochondrion, nucleus | 28.31 | 26.78 |
| CDY42284 | Canola | mitochondrion | 16.57 | 26.57 |
| GSMUA_Achr9P05500_001 | Banana | nucleus | 25.6 | 25.99 |
| GSMUA_Achr1P04990_001 | Banana | nucleus | 22.89 | 25.59 |
| AT5G19650.1 | Thale cress | mitochondrion, nucleus | 16.87 | 25.34 |
| KRH60283 | Soybean | mitochondrion, nucleus | 21.39 | 24.91 |
| CDY58970 | Canola | mitochondrion | 15.96 | 24.77 |
| CDX92512 | Canola | mitochondrion | 15.96 | 24.77 |
| KRH41574 | Soybean | mitochondrion, nucleus | 21.69 | 24.57 |
| TraesCS4D01G262000.1 | Wheat | mitochondrion | 20.18 | 24.1 |
| Bra002252.1-P | Field mustard | mitochondrion | 15.36 | 23.94 |
| PGSC0003DMT400000838 | Potato | nucleus | 20.18 | 23.93 |
| TraesCS1D01G275100.1 | Wheat | plastid | 15.96 | 23.14 |
| TraesCS3D01G368500.1 | Wheat | plastid | 15.36 | 22.47 |
| TraesCS1D01G191500.1 | Wheat | mitochondrion | 16.27 | 21.95 |
| TraesCS4D01G316300.1 | Wheat | nucleus, plastid | 13.25 | 19.47 |
| TraesCS6D01G239400.1 | Wheat | plastid | 14.46 | 16.22 |
| TraesCS2D01G394400.1 | Wheat | mitochondrion | 17.47 | 15.18 |
| TraesCS2D01G390300.1 | Wheat | mitochondrion | 11.45 | 14.9 |
| TraesCS3D01G289200.1 | Wheat | nucleus | 13.25 | 14.86 |
| TraesCS2D01G105600.1 | Wheat | nucleus | 12.05 | 14.49 |
| TraesCS4D01G171100.1 | Wheat | nucleus, plastid | 12.95 | 14.1 |
| TraesCS1D01G299500.1 | Wheat | nucleus | 15.06 | 13.44 |
| TraesCS3D01G339100.1 | Wheat | nucleus | 14.76 | 13.35 |
| TraesCS1D01G340300.1 | Wheat | nucleus | 13.25 | 12.75 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G227100.1 | EnsemblPlantsGene:TraesCS3D01G227100 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045892 | InterPro:IPR006458 | InterPro:Ovate | InterPro:Ovate_C | PANTHER:PTHR33057 |
| PANTHER:PTHR33057:SF12 | PFAM:PF04844 | PFscan:PS51754 | SEG:seg | TIGRFAMs:TIGR01568 | MapMan:15.5.37 |
Description
No Description!
Coordinates
chr3D:+:308739095..308740093
Molecular Weight (calculated)
36466.8 Da
IEP (calculated)
10.032
GRAVY (calculated)
-0.664
Length
332 amino acids
Sequence
(BLAST)
(BLAST)
001: MDETPHRRTG VGAGVRLKQK LAQLLVRSSC ITNATKTTTT PATAFVSLDK ANANPNQEPR HSPDLCTHCT YQRPNPVEGS RHRHRSASVV HASVDYLGGV
101: SGRRPVHSIA PLLPPSVQTN DAMKSRGARS RSVSRRHRSY SSCRRLRRPR MNSVPYSCSS STATDDESAE DAETTTLFSS LSFSSDSTCE FYHANSSNAS
201: RKSHRNAPRG APRRALPSAR DPPDALPPRV NLATKHHHCK NSKREEDANA IKKMVVEETG AIGVGMAVVK RSSNPYADFR SSMVEMVVER RIASLGKMEE
301: LLESYLSLNS PEHHPAIIAA FEDVWEAVFG EA
101: SGRRPVHSIA PLLPPSVQTN DAMKSRGARS RSVSRRHRSY SSCRRLRRPR MNSVPYSCSS STATDDESAE DAETTTLFSS LSFSSDSTCE FYHANSSNAS
201: RKSHRNAPRG APRRALPSAR DPPDALPPRV NLATKHHHCK NSKREEDANA IKKMVVEETG AIGVGMAVVK RSSNPYADFR SSMVEMVVER RIASLGKMEE
301: LLESYLSLNS PEHHPAIIAA FEDVWEAVFG EA
001: MEKRMKLRVS RIVRSSLSSC RPRDLYDVVE TCAVTSKATS SERFFVTKAK TKTPSRPKSH ASSCPRASPI FPPNPFYEES RSFRDLRKKV KTNRKQRSQF
101: GSDPLFASRF KSTGSWYWSC SEEEDEGDKE ESEDDDSDTL FSSRSFSSDS SKAESFAVVK KSKDPYEDFR TSMVEMIVER QIFAPAELQQ LLQCFLSLNS
201: RQHHKVIVQV FLEIYATLFS P
101: GSDPLFASRF KSTGSWYWSC SEEEDEGDKE ESEDDDSDTL FSSRSFSSDS SKAESFAVVK KSKDPYEDFR TSMVEMIVER QIFAPAELQQ LLQCFLSLNS
201: RQHHKVIVQV FLEIYATLFS P
Arabidopsis Description
OFP8Transcription repressor OFP8 [Source:UniProtKB/Swiss-Prot;Acc:Q3E9B4]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.