Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G228900.1 | Wheat | nucleus | 93.13 | 93.98 |
| TraesCS3D01G227100.1 | Wheat | nucleus | 92.24 | 93.07 |
| HORVU3Hr1G055980.1 | Barley | nucleus | 85.37 | 85.12 |
| Os01t0625900-01 | Rice | nucleus | 60.3 | 55.19 |
| EES03313 | Sorghum | nucleus | 59.4 | 47.95 |
| Zm00001d011410_P001 | Maize | nucleus, plastid | 56.12 | 47.12 |
| Zm00001d044167_P001 | Maize | mitochondrion, nucleus | 58.81 | 46.24 |
| TraesCS3B01G178800.1 | Wheat | nucleus | 29.55 | 27.97 |
| CDY44933 | Canola | mitochondrion | 16.72 | 27.18 |
| Bra020055.1-P | Field mustard | mitochondrion | 16.72 | 27.18 |
| CDY42284 | Canola | mitochondrion | 16.42 | 26.57 |
| GSMUA_Achr9P05500_001 | Banana | nucleus | 24.78 | 25.38 |
| GSMUA_Achr1P04990_001 | Banana | nucleus | 22.39 | 25.25 |
| TraesCS4B01G262000.1 | Wheat | mitochondrion | 20.6 | 25.0 |
| AT5G19650.1 | Thale cress | mitochondrion, nucleus | 16.42 | 24.89 |
| CDY58970 | Canola | mitochondrion | 15.52 | 24.3 |
| CDX92512 | Canola | mitochondrion | 15.52 | 24.3 |
| PGSC0003DMT400000838 | Potato | nucleus | 20.3 | 24.29 |
| TraesCS1B01G284700.1 | Wheat | plastid | 16.12 | 23.89 |
| KRH60283 | Soybean | mitochondrion, nucleus | 20.0 | 23.51 |
| Bra002252.1-P | Field mustard | mitochondrion | 14.93 | 23.47 |
| KRH41574 | Soybean | mitochondrion, nucleus | 20.3 | 23.21 |
| TraesCS3B01G408300.1 | Wheat | plastid | 14.93 | 22.12 |
| TraesCS1B01G193300.1 | Wheat | mitochondrion | 15.82 | 21.54 |
| TraesCS2B01G410500.1 | Wheat | mitochondrion | 11.94 | 15.81 |
| TraesCS4B01G319700.1 | Wheat | plastid | 14.33 | 15.74 |
| TraesCS3B01G324100.1 | Wheat | nucleus | 13.43 | 15.46 |
| TraesCS6B01G267100.1 | Wheat | plastid | 13.73 | 15.44 |
| TraesCS4B01G168800.1 | Wheat | mitochondrion, nucleus, plastid | 12.54 | 15.27 |
| TraesCS2B01G415000.1 | Wheat | mitochondrion | 16.72 | 14.97 |
| TraesCS1B01G310200.1 | Wheat | mitochondrion, plastid | 14.63 | 13.73 |
| TraesCS2B01G123000.1 | Wheat | nucleus | 11.04 | 13.55 |
| TraesCS3B01G377200.1 | Wheat | mitochondrion, nucleus | 14.33 | 13.26 |
| TraesCS1B01G350500.1 | Wheat | cytosol, mitochondrion, nucleus | 12.54 | 12.17 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G255700.1 | EnsemblPlantsGene:TraesCS3B01G255700 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045892 | InterPro:IPR006458 | InterPro:Ovate | InterPro:Ovate_C | PANTHER:PTHR33057 |
| PANTHER:PTHR33057:SF12 | PFAM:PF04844 | PFscan:PS51754 | SEG:seg | TIGRFAMs:TIGR01568 | MapMan:15.5.37 |
Description
No Description!
Coordinates
chr3B:-:412873458..412874856
Molecular Weight (calculated)
37054.5 Da
IEP (calculated)
10.173
GRAVY (calculated)
-0.691
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: MDESPHRRTG VGTGVRLKQK LAQLLVRSSC ISNATKTTTT PATAFVSLDK ANTNPHQEPL HSPDLCTHCT YQRPNLVEGS RSSRHRHRSA SVVHASVDYP
101: GGVSGRRPVH SIVPLLPPSV QTNDAKKSRG ARSRSVSRRH RSYSSCRRLR RPRMNSVPYS CSPSTATDDE SGEDAETTTL FSSLSFSSDS TCEFYHTNSS
201: NASRKSHRNG LRRAPRRALP SARDPPDAFQ PRVNLATKHN YCKNSKREED ANAIKKMVVE EIGAIGVGMA VVKRSSNPYA DFRSSMVEMV VERRIANVGK
301: MEELLESYLS LNSPEHHPAI IAAFEDVWEA VFGEA
101: GGVSGRRPVH SIVPLLPPSV QTNDAKKSRG ARSRSVSRRH RSYSSCRRLR RPRMNSVPYS CSPSTATDDE SGEDAETTTL FSSLSFSSDS TCEFYHTNSS
201: NASRKSHRNG LRRAPRRALP SARDPPDAFQ PRVNLATKHN YCKNSKREED ANAIKKMVVE EIGAIGVGMA VVKRSSNPYA DFRSSMVEMV VERRIANVGK
301: MEELLESYLS LNSPEHHPAI IAAFEDVWEA VFGEA
001: MTKRFKLKIS RILSFKSCRL KDPSSLPFNP VSSSLRRTSP LVNSSADVTT VPQRRRSSFR LHVLTVFGCG RSSTPLDVDL RNSPVLSPPQ TPTFQWESEG
101: KWHVIAQVTE EEYETPRRKI YNGGSEKDNR RRLKKKEKSN SRRRGSISSA EEETDRESLL PSSTNLSPEY SSSELPRVTR RPRQLLKKAV IEEESESSSP
201: PPSPARLSSF VQRLMPCTMA AAVMVEGVAV VKKSEDPYED FKGSMMEMIV EKKMFEVAEL EQLLSCFLSL NAKRHHRAIV RAFSEIWVAL FSGGSGGGRR
301: SSSFSSVRLS DYDEC
101: KWHVIAQVTE EEYETPRRKI YNGGSEKDNR RRLKKKEKSN SRRRGSISSA EEETDRESLL PSSTNLSPEY SSSELPRVTR RPRQLLKKAV IEEESESSSP
201: PPSPARLSSF VQRLMPCTMA AAVMVEGVAV VKKSEDPYED FKGSMMEMIV EKKMFEVAEL EQLLSCFLSL NAKRHHRAIV RAFSEIWVAL FSGGSGGGRR
301: SSSFSSVRLS DYDEC
Arabidopsis Description
OFP7Transcription repressor OFP7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU65]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.