Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0583600-01 | Rice | cytosol | 12.79 | 56.72 |
| GSMUA_Achr9P05500_001 | Banana | nucleus | 47.14 | 42.81 |
| GSMUA_Achr11P... | Banana | nucleus | 21.21 | 40.13 |
| GSMUA_Achr2P19920_001 | Banana | nucleus | 24.92 | 38.54 |
| CDX92512 | Canola | mitochondrion | 19.53 | 27.1 |
| CDY58970 | Canola | mitochondrion | 19.53 | 27.1 |
| KRH60283 | Soybean | mitochondrion, nucleus | 25.93 | 27.02 |
| KRH41574 | Soybean | mitochondrion, nucleus | 26.6 | 26.96 |
| PGSC0003DMT400000838 | Potato | nucleus | 25.25 | 26.79 |
| Bra002252.1-P | Field mustard | mitochondrion | 18.86 | 26.29 |
| AT5G19650.1 | Thale cress | mitochondrion, nucleus | 19.53 | 26.24 |
| Bra020055.1-P | Field mustard | mitochondrion | 17.85 | 25.73 |
| CDY44933 | Canola | mitochondrion | 17.85 | 25.73 |
| GSMUA_Achr8P15960_001 | Banana | nucleus | 30.64 | 25.63 |
| CDY42284 | Canola | mitochondrion | 17.85 | 25.6 |
| GSMUA_Achr6P19470_001 | Banana | nucleus | 15.15 | 24.19 |
| GSMUA_Achr9P02660_001 | Banana | mitochondrion | 15.82 | 23.74 |
| GSMUA_Achr4P14010_001 | Banana | nucleus | 17.17 | 23.72 |
| TraesCS3D01G227100.1 | Wheat | nucleus | 25.59 | 22.89 |
| TraesCS3A01G228900.1 | Wheat | nucleus | 25.59 | 22.89 |
| TraesCS3B01G255700.1 | Wheat | nucleus | 25.25 | 22.39 |
| HORVU3Hr1G055980.1 | Barley | nucleus | 25.25 | 22.32 |
| GSMUA_Achr11P... | Banana | plastid | 12.46 | 21.51 |
| Os01t0625900-01 | Rice | nucleus | 26.26 | 21.31 |
| GSMUA_Achr6P18350_001 | Banana | mitochondrion | 14.81 | 20.37 |
| GSMUA_Achr5P20250_001 | Banana | plastid | 14.14 | 20.29 |
| GSMUA_Achr1P03740_001 | Banana | plastid | 11.78 | 20.11 |
| EES03313 | Sorghum | nucleus | 27.61 | 19.76 |
| OQU78505 | Sorghum | nucleus | 23.91 | 19.72 |
| GSMUA_Achr7P25950_001 | Banana | mitochondrion | 20.88 | 18.9 |
| GSMUA_Achr6P25230_001 | Banana | nucleus | 17.85 | 18.4 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 13.47 | 18.02 |
| Zm00001d044167_P001 | Maize | mitochondrion, nucleus | 24.92 | 17.37 |
| GSMUA_Achr5P29630_001 | Banana | nucleus | 18.18 | 17.36 |
| GSMUA_Achr8P12190_001 | Banana | plastid | 11.45 | 17.35 |
| Zm00001d011410_P001 | Maize | nucleus, plastid | 23.23 | 17.29 |
| GSMUA_Achr3P09850_001 | Banana | mitochondrion | 16.84 | 15.77 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 18.86 | 15.51 |
| GSMUA_Achr6P31770_001 | Banana | nucleus | 15.15 | 15.36 |
| GSMUA_Achr9P05640_001 | Banana | nucleus | 14.81 | 15.22 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P04990_001 | EnsemblPlants:GSMUA_Achr1T04990_001 | EnsemblPlantsGene:GSMUA_Achr1G04990_001 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045892 | InterPro:IPR006458 | InterPro:Ovate | InterPro:Ovate_C |
| ncoils:Coil | PANTHER:PTHR33057 | PANTHER:PTHR33057:SF12 | PFAM:PF04844 | PFscan:PS51754 | SEG:seg |
| TIGRFAMs:TIGR01568 | UniParc:UPI00029589E2 | UniProt:M0RX57 | MapMan:15.5.37 | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G04990_001]
Coordinates
chr1:+:4153469..4154362
Molecular Weight (calculated)
34156.4 Da
IEP (calculated)
10.596
GRAVY (calculated)
-1.139
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKFNNKGSS AKLKHRLTWM LLGSSCTTTT TIAEAAPDPC TDFRYRNSRP SRATDDHRPR RVDPVGRVKP LFFLMNKKEN DKEKRALIES VSPSEGKQRT
101: KEASERKKKK KKKTKKKKQK KVLFDAYGFT SSSSLDSEND HDLFSSDEEE KDEDESGTLF SSKSFSTESS EFYHSSRKKK KKKKNTRRKS MKSTRRPPRR
201: RVKHSQEPQP LVSISSSEKE TKPEAAAYIA GFPVVKRSTD PYGDFRSSMA EMIVERGMSR ARDLERLLHA YLHLNSPRHY QAILEAFSDV CEAIFGK
101: KEASERKKKK KKKTKKKKQK KVLFDAYGFT SSSSLDSEND HDLFSSDEEE KDEDESGTLF SSKSFSTESS EFYHSSRKKK KKKKNTRRKS MKSTRRPPRR
201: RVKHSQEPQP LVSISSSEKE TKPEAAAYIA GFPVVKRSTD PYGDFRSSMA EMIVERGMSR ARDLERLLHA YLHLNSPRHY QAILEAFSDV CEAIFGK
001: MTKRFKLKIS RILSFKSCRL KDPSSLPFNP VSSSLRRTSP LVNSSADVTT VPQRRRSSFR LHVLTVFGCG RSSTPLDVDL RNSPVLSPPQ TPTFQWESEG
101: KWHVIAQVTE EEYETPRRKI YNGGSEKDNR RRLKKKEKSN SRRRGSISSA EEETDRESLL PSSTNLSPEY SSSELPRVTR RPRQLLKKAV IEEESESSSP
201: PPSPARLSSF VQRLMPCTMA AAVMVEGVAV VKKSEDPYED FKGSMMEMIV EKKMFEVAEL EQLLSCFLSL NAKRHHRAIV RAFSEIWVAL FSGGSGGGRR
301: SSSFSSVRLS DYDEC
101: KWHVIAQVTE EEYETPRRKI YNGGSEKDNR RRLKKKEKSN SRRRGSISSA EEETDRESLL PSSTNLSPEY SSSELPRVTR RPRQLLKKAV IEEESESSSP
201: PPSPARLSSF VQRLMPCTMA AAVMVEGVAV VKKSEDPYED FKGSMMEMIV EKKMFEVAEL EQLLSCFLSL NAKRHHRAIV RAFSEIWVAL FSGGSGGGRR
301: SSSFSSVRLS DYDEC
Arabidopsis Description
OFP7Transcription repressor OFP7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU65]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.