Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0583600-01 | Rice | cytosol | 12.23 | 59.7 |
| GSMUA_Achr1P04990_001 | Banana | nucleus | 42.81 | 47.14 |
| GSMUA_Achr11P... | Banana | nucleus | 22.02 | 45.86 |
| GSMUA_Achr2P19920_001 | Banana | nucleus | 23.24 | 39.58 |
| CDX92512 | Canola | mitochondrion | 20.8 | 31.78 |
| CDY58970 | Canola | mitochondrion | 20.8 | 31.78 |
| AT5G19650.1 | Thale cress | mitochondrion, nucleus | 21.41 | 31.67 |
| Bra020055.1-P | Field mustard | mitochondrion | 19.88 | 31.55 |
| CDY44933 | Canola | mitochondrion | 19.88 | 31.55 |
| Bra002252.1-P | Field mustard | mitochondrion | 20.18 | 30.99 |
| CDY42284 | Canola | mitochondrion | 19.57 | 30.92 |
| KRH60283 | Soybean | mitochondrion, nucleus | 25.38 | 29.12 |
| KRH41574 | Soybean | mitochondrion, nucleus | 25.38 | 28.33 |
| GSMUA_Achr8P15960_001 | Banana | nucleus | 30.28 | 27.89 |
| PGSC0003DMT400000838 | Potato | nucleus | 22.32 | 26.07 |
| GSMUA_Achr9P02660_001 | Banana | mitochondrion | 15.6 | 25.76 |
| TraesCS3A01G228900.1 | Wheat | nucleus | 25.99 | 25.6 |
| TraesCS3D01G227100.1 | Wheat | nucleus | 25.99 | 25.6 |
| GSMUA_Achr4P14010_001 | Banana | nucleus | 16.82 | 25.58 |
| TraesCS3B01G255700.1 | Wheat | nucleus | 25.38 | 24.78 |
| HORVU3Hr1G055980.1 | Barley | nucleus | 24.77 | 24.11 |
| Os01t0625900-01 | Rice | nucleus | 26.61 | 23.77 |
| GSMUA_Achr6P19470_001 | Banana | nucleus | 13.46 | 23.66 |
| GSMUA_Achr6P18350_001 | Banana | mitochondrion | 14.98 | 22.69 |
| GSMUA_Achr7P25950_001 | Banana | mitochondrion | 22.63 | 22.56 |
| GSMUA_Achr1P03740_001 | Banana | plastid | 11.93 | 22.41 |
| GSMUA_Achr5P20250_001 | Banana | plastid | 13.76 | 21.74 |
| EES03313 | Sorghum | nucleus | 27.52 | 21.69 |
| OQU78505 | Sorghum | nucleus | 23.24 | 21.11 |
| GSMUA_Achr11P... | Banana | plastid | 11.01 | 20.93 |
| Zm00001d011410_P001 | Maize | nucleus, plastid | 25.08 | 20.55 |
| GSMUA_Achr6P25230_001 | Banana | nucleus | 18.04 | 20.49 |
| Zm00001d044167_P001 | Maize | mitochondrion, nucleus | 26.3 | 20.19 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 13.46 | 19.82 |
| GSMUA_Achr5P29630_001 | Banana | nucleus | 17.74 | 18.65 |
| GSMUA_Achr8P12190_001 | Banana | plastid | 11.01 | 18.37 |
| GSMUA_Achr3P09850_001 | Banana | mitochondrion | 17.13 | 17.67 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 18.35 | 16.62 |
| GSMUA_Achr9P05640_001 | Banana | nucleus | 14.37 | 16.26 |
| GSMUA_Achr6P31770_001 | Banana | nucleus | 14.07 | 15.7 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P05500_001 | EnsemblPlants:GSMUA_Achr9T05500_001 | EnsemblPlantsGene:GSMUA_Achr9G05500_001 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045892 | InterPro:IPR006458 | InterPro:Ovate | InterPro:Ovate_C |
| PANTHER:PTHR33057 | PANTHER:PTHR33057:SF24 | PFAM:PF04844 | PFscan:PS51754 | SEG:seg | TIGRFAMs:TIGR01568 |
| UniParc:UPI0002952E95 | UniProt:M0TXQ9 | MapMan:15.5.37 | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G05500_001]
Coordinates
chr9:-:3543329..3544972
Molecular Weight (calculated)
36232.7 Da
IEP (calculated)
10.220
GRAVY (calculated)
-0.843
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKTCTSSSP CRSGLKHRFA RMLLGSSCSS TATATDVIKL SSSTLRQQLV PEESSICRSG DGQRKLRNPL SFPSNDGGHQ HCVAPVVQGS VHRGARRSGH
101: EIKKERRVTE IGERSKCPPA PPDSPMRNRY YRSHDEDKKK KACGRRGSSR RKATRKLLSS NGYGFSSSSS LDRNGELGLF SSGEEEEESG TLFSSKSFSS
201: DSSEFYCNNN GRRKKNKKKS GSKSMKSNQP LRGTATGKLW PLASLSSAEK KHKAEAEMEV GFPVVKKSSD PYMDFRSSMV EMIVERQMSS ASDMERLLHS
301: YLSLNSHLHH PVILEAFLDT WEAILGE
101: EIKKERRVTE IGERSKCPPA PPDSPMRNRY YRSHDEDKKK KACGRRGSSR RKATRKLLSS NGYGFSSSSS LDRNGELGLF SSGEEEEESG TLFSSKSFSS
201: DSSEFYCNNN GRRKKNKKKS GSKSMKSNQP LRGTATGKLW PLASLSSAEK KHKAEAEMEV GFPVVKKSSD PYMDFRSSMV EMIVERQMSS ASDMERLLHS
301: YLSLNSHLHH PVILEAFLDT WEAILGE
001: MEKRMKLRVS RIVRSSLSSC RPRDLYDVVE TCAVTSKATS SERFFVTKAK TKTPSRPKSH ASSCPRASPI FPPNPFYEES RSFRDLRKKV KTNRKQRSQF
101: GSDPLFASRF KSTGSWYWSC SEEEDEGDKE ESEDDDSDTL FSSRSFSSDS SKAESFAVVK KSKDPYEDFR TSMVEMIVER QIFAPAELQQ LLQCFLSLNS
201: RQHHKVIVQV FLEIYATLFS P
101: GSDPLFASRF KSTGSWYWSC SEEEDEGDKE ESEDDDSDTL FSSRSFSSDS SKAESFAVVK KSKDPYEDFR TSMVEMIVER QIFAPAELQQ LLQCFLSLNS
201: RQHHKVIVQV FLEIYATLFS P
Arabidopsis Description
OFP8Transcription repressor OFP8 [Source:UniProtKB/Swiss-Prot;Acc:Q3E9B4]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.