Factsheet for GSMUA_AchrUn_randomP12110_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P29630_001	Banana	nucleus	51.8	60.13
GSMUA_Achr6P25230_001	Banana	nucleus	35.18	44.1
GSMUA_Achr3P09850_001	Banana	mitochondrion	34.35	39.12
GSMUA_Achr11P...	Banana	nucleus	12.19	28.03
GSMUA_Achr9P02660_001	Banana	mitochondrion	13.3	24.24
GSMUA_Achr6P18350_001	Banana	mitochondrion	14.4	24.07
GSMUA_Achr2P19920_001	Banana	nucleus	11.91	22.4
GSMUA_Achr6P19470_001	Banana	nucleus	11.08	21.51
GSMUA_Achr6P31770_001	Banana	nucleus	17.45	21.5
GSMUA_Achr9P05640_001	Banana	nucleus	16.9	21.11
GSMUA_Achr4P14010_001	Banana	nucleus	12.19	20.47
GSMUA_AchrUn_...	Banana	mitochondrion	12.47	20.27
GSMUA_Achr1P04990_001	Banana	nucleus	15.51	18.86
GSMUA_Achr5P20250_001	Banana	plastid	10.8	18.84
GSMUA_Achr9P05500_001	Banana	nucleus	16.62	18.35
GSMUA_Achr8P12190_001	Banana	plastid	9.42	17.35
GSMUA_Achr11P...	Banana	plastid	8.03	16.86
GSMUA_Achr8P15960_001	Banana	nucleus	16.34	16.62
GSMUA_Achr1P03740_001	Banana	plastid	7.76	16.09
GSMUA_Achr7P25950_001	Banana	mitochondrion	14.4	15.85

Protein Annotations

MapMan:15.5.37	InterPro:DNA_bnd_dom_ovate	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045892
EnsemblPlantsGene:GSMUA_AchrUn_randomG12110_001	EnsemblPlants:GSMUA_AchrUn_randomP12110_001	EnsemblPlants:GSMUA_AchrUn_randomT12110_001	InterPro:IPR006458	UniProt:M0U8H0	InterPro:Ovate
InterPro:Ovate_C	PFAM:PF04844	PFAM:PF13724	PFscan:PS51754	PANTHER:PTHR33057	PANTHER:PTHR33057:SF22
TIGRFAMs:TIGR01568	UniParc:UPI0002964321	SEG:seg	:	:	:

Description

Putative DUF623 domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG12110_001]

Coordinates

chrchrUn_random:+:57944034..57945119

Molecular Weight (calculated)

40575.2 Da

IEP (calculated)

10.194

GRAVY (calculated)

-0.667

Length

361 amino acids

Sequence
(BLAST)

001: MGNYRFRLLD MIANACFYKL KHTGQRAHKN SMGRGQPPRA AATTTPVHFS PPEPKLLPNR ASHYYSSRAE ADRFSFSPTR SKVLDTHFPV EPARKSKKCV
101: RRKPIRAAPT KPKLAASSVP EFPAVASPVT PPYQLDLYID GDNHEFQGIH AGDRFKSEDA SSWPHSRSCR VTSSATDVIV EVDTNSSTTQ TQKKLDEFDS
201: VSELKLRPII TKPATSEAEQ SKKQAKRSSP GLHRFPMRAN SPRLARKKVQ AQLGQRCGGT EAAAALERKG FLESFAVVKS SSDPGRDFRD SMVEMIVENN
301: IRASKDLEEL LACYLLLNSN EYHDVIVKAF EQIWFDLAEV KLRNRRKEWL KDHSLNGCTM S

Best Arabidopsis Sequence Match ( AT1G06920.1 )
(BLAST)

001: MRNYKLRLSV MSPSEWFHKL KNMTKPRKKH SLPLYSINTT KKRKPSSESK SLPYSSTSYF FNRSRSRTSF ESRILQISPR NSLHNIQSKR KTVYKPSPPS
101: SSIVSAGFNK TFHQSHDSLS ASSNLKVISS EDDIIIDMNN RDFKKKTFKE ITKFDSTEKA CRASNRTKET HIPHHLSVKV SKEKEDEEED ACRTKKKHQK
201: TLVSSGRRSS AKSPRIKLRA RSPRIQVSPR RSKSRSQNKQ ILDSFAVIKS SIDPSKDFRE SMVEMIAENN IRTSNDMEDL LVCYLTLNPK EYHDLIIKVF
301: VQVWLEVINS TFASK

Arabidopsis Description

OFP4Transcription repressor OFP4 [Source:UniProtKB/Swiss-Prot;Acc:F4HNU8]
SUBAcon: [mitochondrion,plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.