Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
- nucleus 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | nucleus | 36.06 | 81.53 |
| GSMUA_Achr2P19920_001 | Banana | nucleus | 40.28 | 74.48 |
| KXG20752 | Sorghum | cytosol, nucleus | 20.0 | 40.11 |
| Os01t0226700-01 | Rice | mitochondrion, nucleus | 24.79 | 35.2 |
| EES17897 | Sorghum | nucleus, plastid | 29.58 | 34.77 |
| KXG33158 | Sorghum | cytosol, plastid | 13.24 | 33.81 |
| CDX92512 | Canola | mitochondrion | 20.28 | 33.64 |
| CDY58970 | Canola | mitochondrion | 20.28 | 33.64 |
| Zm00001d037814_P001 | Maize | plastid | 26.76 | 33.45 |
| Bra002252.1-P | Field mustard | mitochondrion | 20.0 | 33.33 |
| TraesCS3D01G159700.1 | Wheat | mitochondrion, nucleus | 32.11 | 32.48 |
| TraesCS3A01G151800.1 | Wheat | nucleus, plastid | 32.11 | 32.29 |
| KRH60283 | Soybean | mitochondrion, nucleus | 25.92 | 32.28 |
| AT5G19650.1 | Thale cress | mitochondrion, nucleus | 20.0 | 32.13 |
| HORVU3Hr1G030870.1 | Barley | nucleus | 32.11 | 31.84 |
| Zm00001d039313_P001 | Maize | mitochondrion | 33.8 | 31.83 |
| TraesCS3B01G178800.1 | Wheat | nucleus | 31.55 | 31.64 |
| Bra020055.1-P | Field mustard | mitochondrion | 18.31 | 31.55 |
| CDY44933 | Canola | mitochondrion | 18.31 | 31.55 |
| KRH41574 | Soybean | mitochondrion, nucleus | 25.63 | 31.06 |
| CDY42284 | Canola | mitochondrion | 18.03 | 30.92 |
| GSMUA_Achr1P04990_001 | Banana | nucleus | 25.63 | 30.64 |
| GSMUA_Achr9P05500_001 | Banana | nucleus | 27.89 | 30.28 |
| EES02214 | Sorghum | mitochondrion, nucleus | 32.11 | 30.16 |
| PGSC0003DMT400000838 | Potato | nucleus | 23.1 | 29.29 |
| GSMUA_Achr4P14010_001 | Banana | nucleus | 16.9 | 27.91 |
| GSMUA_Achr9P02660_001 | Banana | mitochondrion | 14.37 | 25.76 |
| GSMUA_Achr7P25950_001 | Banana | mitochondrion | 22.54 | 24.39 |
| GSMUA_Achr6P19470_001 | Banana | nucleus | 12.68 | 24.19 |
| GSMUA_Achr5P20250_001 | Banana | plastid | 14.08 | 24.15 |
| GSMUA_Achr11P... | Banana | plastid | 10.99 | 22.67 |
| GSMUA_Achr8P12190_001 | Banana | plastid | 11.83 | 21.43 |
| GSMUA_Achr6P18350_001 | Banana | mitochondrion | 12.96 | 21.3 |
| GSMUA_Achr1P03740_001 | Banana | plastid | 10.42 | 21.26 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 13.24 | 21.17 |
| GSMUA_Achr6P25230_001 | Banana | nucleus | 14.93 | 18.4 |
| GSMUA_Achr5P29630_001 | Banana | nucleus | 14.65 | 16.72 |
| GSMUA_Achr3P09850_001 | Banana | mitochondrion | 14.93 | 16.72 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 16.62 | 16.34 |
| GSMUA_Achr6P31770_001 | Banana | nucleus | 12.39 | 15.02 |
| GSMUA_Achr9P05640_001 | Banana | nucleus | 11.55 | 14.19 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P15960_001 | EnsemblPlants:GSMUA_Achr8T15960_001 | EnsemblPlantsGene:GSMUA_Achr8G15960_001 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045892 | InterPro:IPR006458 | InterPro:Ovate | InterPro:Ovate_C |
| ncoils:Coil | PANTHER:PTHR33057 | PANTHER:PTHR33057:SF24 | PFAM:PF04844 | PFscan:PS51754 | SEG:seg |
| TIGRFAMs:TIGR01568 | UniParc:UPI0002956160 | UniProt:M0TQU9 | MapMan:15.5.37 | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G15960_001]
Coordinates
chr8:-:13767841..13768908
Molecular Weight (calculated)
40738.0 Da
IEP (calculated)
10.406
GRAVY (calculated)
-0.981
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MESSRSNKLK QRLARMFRSP SLLRSPCKPS ASAATNLSST ASTRALFDDA VHEPVFVPRR RGGSLDDHLG RSFSSTVPTV AVARRRSVDY SGCRPTCAIE
101: CSQPAPLVAK NEKWRDLKAR KKERRVRETG GYYETGEWEG RTCPPASPSS PSKSSYYYYC FNGDVKEEKE GIKRKKKKKK KKKKKRVPSN SYRFSSSSSM
201: ESDVQEDGFF SSEEREGKEE ETETFFSSRS FSSDSSEFYQ RPTSKEKNKN KNKRNPERPQ RRRARKYEAW GVCKGFQPLV SITRREKKGF AVVKRSSDPY
301: NDFRSSMLEM ITERQIFGAE DLECLLQSYL SLNSPHLHPL ILQAFSDIWV VLFGH
101: CSQPAPLVAK NEKWRDLKAR KKERRVRETG GYYETGEWEG RTCPPASPSS PSKSSYYYYC FNGDVKEEKE GIKRKKKKKK KKKKKRVPSN SYRFSSSSSM
201: ESDVQEDGFF SSEEREGKEE ETETFFSSRS FSSDSSEFYQ RPTSKEKNKN KNKRNPERPQ RRRARKYEAW GVCKGFQPLV SITRREKKGF AVVKRSSDPY
301: NDFRSSMLEM ITERQIFGAE DLECLLQSYL SLNSPHLHPL ILQAFSDIWV VLFGH
001: MEKRMKLRVS RIVRSSLSSC RPRDLYDVVE TCAVTSKATS SERFFVTKAK TKTPSRPKSH ASSCPRASPI FPPNPFYEES RSFRDLRKKV KTNRKQRSQF
101: GSDPLFASRF KSTGSWYWSC SEEEDEGDKE ESEDDDSDTL FSSRSFSSDS SKAESFAVVK KSKDPYEDFR TSMVEMIVER QIFAPAELQQ LLQCFLSLNS
201: RQHHKVIVQV FLEIYATLFS P
101: GSDPLFASRF KSTGSWYWSC SEEEDEGDKE ESEDDDSDTL FSSRSFSSDS SKAESFAVVK KSKDPYEDFR TSMVEMIVER QIFAPAELQQ LLQCFLSLNS
201: RQHHKVIVQV FLEIYATLFS P
Arabidopsis Description
OFP8Transcription repressor OFP8 [Source:UniProtKB/Swiss-Prot;Acc:Q3E9B4]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.