CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
mitochondrion 3
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037814_P001	Maize	plastid	74.17	78.87
KXG20752	Sorghum	cytosol, nucleus	28.81	49.15
KXG33158	Sorghum	cytosol, plastid	21.52	46.76
GSMUA_Achr11P...	Banana	nucleus	22.52	43.31
GSMUA_Achr2P19920_001	Banana	nucleus	25.5	40.1
EES02214	Sorghum	mitochondrion, nucleus	44.04	35.19
GSMUA_Achr8P15960_001	Banana	nucleus	34.77	29.58
Bra020055.1-P	Field mustard	mitochondrion	17.88	26.21
CDY44933	Canola	mitochondrion	17.88	26.21
EES03313	Sorghum	nucleus	35.43	25.78
CDY42284	Canola	mitochondrion	17.22	25.12
AT5G19650.1	Thale cress	mitochondrion, nucleus	18.21	24.89
CDX92512	Canola	mitochondrion	17.22	24.3
CDY58970	Canola	mitochondrion	17.22	24.3
Bra002252.1-P	Field mustard	mitochondrion	16.89	23.94
KRH60283	Soybean	mitochondrion, nucleus	20.86	22.11
EES03931	Sorghum	plastid	17.22	22.03
KRH41574	Soybean	mitochondrion, nucleus	21.19	21.84
OQU78505	Sorghum	nucleus	25.83	21.67
EES18304	Sorghum	nucleus, plastid	16.23	21.4
PGSC0003DMT400000838	Potato	nucleus	18.87	20.36
EER94592	Sorghum	mitochondrion	18.21	19.5
EER92692	Sorghum	mitochondrion	19.21	18.59
EER92948	Sorghum	plastid	15.23	18.04
EES17993	Sorghum	nucleus, plastid	13.58	16.6
OQU85631	Sorghum	plastid	16.56	16.23
EES19813	Sorghum	nucleus	17.22	15.52
OQU90474	Sorghum	mitochondrion	12.25	13.36
EES01480	Sorghum	nucleus	15.56	13.28
EES18387	Sorghum	mitochondrion	16.23	13.0
EES11304	Sorghum	plastid	16.56	12.22
OQU92638	Sorghum	mitochondrion	10.6	10.88
KXG33624	Sorghum	nucleus	18.21	10.13

Protein Annotations

MapMan:15.5.37	EntrezGene:8055763	UniProt:C5YUT8	EnsemblPlants:EES17897	ProteinID:EES17897	ProteinID:EES17897.1
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045892
InterPro:IPR006458	InterPro:Ovate	InterPro:Ovate_C	PFAM:PF04844	PFscan:PS51754	PANTHER:PTHR33057
PANTHER:PTHR33057:SF69	EnsemblPlantsGene:SORBI_3009G082300	TIGRFAMs:TIGR01568	UniParc:UPI0001A88A47	RefSeq:XP_002439467.1	SEG:seg

Description

hypothetical protein

Coordinates

chr9:+:11921503..11922913

Molecular Weight (calculated)

33097.9 Da

IEP (calculated)

10.795

GRAVY (calculated)

-0.601

Length

302 amino acids

Sequence
(BLAST)

001: MDCSSRSGGR RLKDRLTQLL LRPANTLPRS PCSSSSSTST VFTATAATTT SISSNSSSTT AANYTTAAAL SRAEPFSAAL GRLRRPPPET ESMRGNKEQR
101: STSSRHSGRR RFKNAVDKGG VRTLSSNPYG FTSSSEEDDG TDVYDDDGDD TETFLSSRSL MSSDSSVFYA YRKMLQPPSK NKSHLRRQRR RRRCCRRPSA
201: SCVETCGAGA VREPGFRPLV ATATATAAAV EQVRKGLAVV KRSRDPYGDF RESMVEMIMG RQVFGAAELE RLLRSYLSLN APRFHPVILQ AFSDVWVVIH
301: GG

Best Arabidopsis Sequence Match ( AT2G18500.1 )
(BLAST)

001: MTKRFKLKIS RILSFKSCRL KDPSSLPFNP VSSSLRRTSP LVNSSADVTT VPQRRRSSFR LHVLTVFGCG RSSTPLDVDL RNSPVLSPPQ TPTFQWESEG
101: KWHVIAQVTE EEYETPRRKI YNGGSEKDNR RRLKKKEKSN SRRRGSISSA EEETDRESLL PSSTNLSPEY SSSELPRVTR RPRQLLKKAV IEEESESSSP
201: PPSPARLSSF VQRLMPCTMA AAVMVEGVAV VKKSEDPYED FKGSMMEMIV EKKMFEVAEL EQLLSCFLSL NAKRHHRAIV RAFSEIWVAL FSGGSGGGRR
301: SSSFSSVRLS DYDEC

Arabidopsis Description

OFP7Transcription repressor OFP7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU65]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.