Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- cytosol 1
- nucleus 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d044167_P001 | Maize | mitochondrion, nucleus | 75.66 | 73.71 |
| Zm00001d011410_P001 | Maize | nucleus, plastid | 67.47 | 70.18 |
| Os01t0625900-01 | Rice | nucleus | 57.59 | 65.3 |
| HORVU3Hr1G055980.1 | Barley | nucleus | 48.19 | 59.52 |
| TraesCS3B01G255700.1 | Wheat | nucleus | 47.95 | 59.4 |
| TraesCS3D01G227100.1 | Wheat | nucleus | 47.47 | 59.34 |
| TraesCS3A01G228900.1 | Wheat | nucleus | 47.47 | 59.34 |
| OQU78505 | Sorghum | nucleus | 36.39 | 41.94 |
| KXG20752 | Sorghum | cytosol, nucleus | 16.87 | 39.55 |
| EES17897 | Sorghum | nucleus, plastid | 25.78 | 35.43 |
| KXG33158 | Sorghum | cytosol, plastid | 11.33 | 33.81 |
| EES02214 | Sorghum | mitochondrion, nucleus | 28.92 | 31.75 |
| Bra020055.1-P | Field mustard | mitochondrion | 13.98 | 28.16 |
| CDY44933 | Canola | mitochondrion | 13.98 | 28.16 |
| GSMUA_Achr1P04990_001 | Banana | nucleus | 19.76 | 27.61 |
| CDX92512 | Canola | mitochondrion | 14.22 | 27.57 |
| CDY58970 | Canola | mitochondrion | 14.22 | 27.57 |
| GSMUA_Achr9P05500_001 | Banana | nucleus | 21.69 | 27.52 |
| Bra002252.1-P | Field mustard | mitochondrion | 13.98 | 27.23 |
| CDY42284 | Canola | mitochondrion | 13.25 | 26.57 |
| KRH60283 | Soybean | mitochondrion, nucleus | 18.07 | 26.32 |
| AT5G19650.1 | Thale cress | mitochondrion, nucleus | 13.98 | 26.24 |
| EES18304 | Sorghum | nucleus, plastid | 14.46 | 26.2 |
| EES03931 | Sorghum | plastid | 14.46 | 25.42 |
| KRH41574 | Soybean | mitochondrion, nucleus | 17.59 | 24.91 |
| EER92692 | Sorghum | mitochondrion | 18.07 | 24.04 |
| PGSC0003DMT400000838 | Potato | nucleus | 15.9 | 23.57 |
| EER94592 | Sorghum | mitochondrion | 13.73 | 20.21 |
| OQU85631 | Sorghum | plastid | 13.98 | 18.83 |
| OQU90474 | Sorghum | mitochondrion | 12.53 | 18.77 |
| EER92948 | Sorghum | plastid | 11.08 | 18.04 |
| EES17993 | Sorghum | nucleus, plastid | 10.36 | 17.41 |
| OQU92638 | Sorghum | mitochondrion | 11.08 | 15.65 |
| EES18387 | Sorghum | mitochondrion | 13.73 | 15.12 |
| EES19813 | Sorghum | nucleus | 11.81 | 14.63 |
| EES11304 | Sorghum | plastid | 14.22 | 14.43 |
| EES01480 | Sorghum | nucleus | 11.57 | 13.56 |
| KXG33624 | Sorghum | nucleus | 13.01 | 9.94 |
Protein Annotations
| MapMan:15.5.37 | EntrezGene:8054913 | UniProt:C5XEC9 | ncoils:Coil | EnsemblPlants:EES03313 | ProteinID:EES03313 |
| ProteinID:EES03313.1 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0045892 | InterPro:IPR006458 | InterPro:Ovate | InterPro:Ovate_C | PFAM:PF04844 | PFscan:PS51754 |
| PANTHER:PTHR33057 | PANTHER:PTHR33057:SF12 | EnsemblPlantsGene:SORBI_3003G227000 | TIGRFAMs:TIGR01568 | UniParc:UPI0001A8507B | RefSeq:XP_002458193.1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:56425156..56426899
Molecular Weight (calculated)
44470.9 Da
IEP (calculated)
10.768
GRAVY (calculated)
-0.676
Length
415 amino acids
Sequence
(BLAST)
(BLAST)
001: MHTPFMDKSP AHRRESAGGR LKQRLARILT RSTCTTNATS ATAAAAGSGG TAAFVSLAKA NTDSSHPREP EAPPSPYFCT PCTYECPKVV VDGGSTRPHR
101: RRSRSRSASL IHISVDCTGG AGAVSGRRSV HSDAPLLQHL LSSVPPRDVV KKQSKGRNRS KPPARSPSAS RRHLSSSSSS WGRARRPSST PTPYSWSSSS
201: SSTATDDELA PLSGSGGGGS DEEGGDEAET RTLFSSLSFS SDSTSEFYHT ITNGGGSTRA RRSQRNTMTR SRRRRAPRRA LLSRTGVDDP AAPPGAFRPL
301: VVSVETQKKH RECNNERNRQ EENGLNVGKL MMMGGAAAAE ETATAGAGMA VVKRSSNPYL DFRSSMVEMV VERRIGSVAK MEELLGSYLS LNSPRHHPAI
401: LAAFEDVWEA VFGEE
101: RRSRSRSASL IHISVDCTGG AGAVSGRRSV HSDAPLLQHL LSSVPPRDVV KKQSKGRNRS KPPARSPSAS RRHLSSSSSS WGRARRPSST PTPYSWSSSS
201: SSTATDDELA PLSGSGGGGS DEEGGDEAET RTLFSSLSFS SDSTSEFYHT ITNGGGSTRA RRSQRNTMTR SRRRRAPRRA LLSRTGVDDP AAPPGAFRPL
301: VVSVETQKKH RECNNERNRQ EENGLNVGKL MMMGGAAAAE ETATAGAGMA VVKRSSNPYL DFRSSMVEMV VERRIGSVAK MEELLGSYLS LNSPRHHPAI
401: LAAFEDVWEA VFGEE
001: MTKRFKLKIS RILSFKSCRL KDPSSLPFNP VSSSLRRTSP LVNSSADVTT VPQRRRSSFR LHVLTVFGCG RSSTPLDVDL RNSPVLSPPQ TPTFQWESEG
101: KWHVIAQVTE EEYETPRRKI YNGGSEKDNR RRLKKKEKSN SRRRGSISSA EEETDRESLL PSSTNLSPEY SSSELPRVTR RPRQLLKKAV IEEESESSSP
201: PPSPARLSSF VQRLMPCTMA AAVMVEGVAV VKKSEDPYED FKGSMMEMIV EKKMFEVAEL EQLLSCFLSL NAKRHHRAIV RAFSEIWVAL FSGGSGGGRR
301: SSSFSSVRLS DYDEC
101: KWHVIAQVTE EEYETPRRKI YNGGSEKDNR RRLKKKEKSN SRRRGSISSA EEETDRESLL PSSTNLSPEY SSSELPRVTR RPRQLLKKAV IEEESESSSP
201: PPSPARLSSF VQRLMPCTMA AAVMVEGVAV VKKSEDPYED FKGSMMEMIV EKKMFEVAEL EQLLSCFLSL NAKRHHRAIV RAFSEIWVAL FSGGSGGGRR
301: SSSFSSVRLS DYDEC
Arabidopsis Description
OFP7Transcription repressor OFP7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU65]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.