Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d042752_P001 | Maize | nucleus, plastid | 90.68 | 86.99 |
| Zm00001d012282_P001 | Maize | nucleus, plastid | 90.25 | 86.23 |
| Os01t0864000-01 | Rice | mitochondrion, plastid | 76.27 | 78.95 |
| TraesCS3A01G376000.1 | Wheat | plastid | 73.73 | 77.68 |
| HORVU3Hr1G083700.1 | Barley | plastid | 73.31 | 77.23 |
| TraesCS3B01G408300.1 | Wheat | plastid | 73.73 | 76.99 |
| TraesCS3D01G368500.1 | Wheat | plastid | 73.31 | 76.21 |
| GSMUA_Achr6P19470_001 | Banana | nucleus | 42.37 | 53.76 |
| EES18304 | Sorghum | nucleus, plastid | 51.27 | 52.84 |
| GSMUA_Achr9P02660_001 | Banana | mitochondrion | 38.14 | 45.45 |
| GSMUA_Achr6P18350_001 | Banana | mitochondrion | 36.44 | 39.81 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 37.29 | 39.64 |
| Solyc11g068780.1.1 | Tomato | cytosol | 21.19 | 36.5 |
| PGSC0003DMT400050511 | Potato | cytosol | 20.76 | 35.25 |
| Solyc01g007800.2.1 | Tomato | mitochondrion | 26.69 | 34.62 |
| VIT_08s0007g02550.t01 | Wine grape | mitochondrion, plastid | 26.69 | 33.87 |
| PGSC0003DMT400042334 | Potato | mitochondrion | 26.27 | 33.7 |
| Solyc10g082050.1.1 | Tomato | mitochondrion | 24.58 | 32.58 |
| KRH67981 | Soybean | mitochondrion | 25.85 | 32.11 |
| KRG96237 | Soybean | mitochondrion | 25.42 | 31.41 |
| PGSC0003DMT400072347 | Potato | mitochondrion, plastid | 25.0 | 31.22 |
| KRH72226 | Soybean | mitochondrion | 22.88 | 31.03 |
| KRH32810 | Soybean | mitochondrion | 22.88 | 30.51 |
| AT3G52525.1 | Thale cress | plastid | 20.34 | 30.19 |
| CDX75076 | Canola | nucleus | 22.03 | 27.96 |
| AT2G36026.1 | Thale cress | nucleus, plastid | 21.61 | 27.87 |
| KRH26670 | Soybean | mitochondrion | 21.61 | 27.42 |
| Bra005303.1-P | Field mustard | mitochondrion, plastid | 21.61 | 27.42 |
| Bra017266.1-P | Field mustard | nucleus | 21.19 | 26.88 |
| CDY43753 | Canola | nucleus | 21.19 | 26.88 |
| KRH22646 | Soybean | mitochondrion, nucleus | 20.34 | 26.09 |
| KRH30374 | Soybean | nucleus, plastid | 21.61 | 25.89 |
| KRH25295 | Soybean | nucleus, plastid | 21.19 | 25.64 |
| KXG20752 | Sorghum | cytosol, nucleus | 17.37 | 23.16 |
| KXG33158 | Sorghum | cytosol, plastid | 12.29 | 20.86 |
| EER92948 | Sorghum | plastid | 22.46 | 20.78 |
| EER94592 | Sorghum | mitochondrion | 24.58 | 20.57 |
| EES17897 | Sorghum | nucleus, plastid | 22.03 | 17.22 |
| OQU85631 | Sorghum | plastid | 21.61 | 16.56 |
| OQU90474 | Sorghum | mitochondrion | 19.07 | 16.25 |
| EES17993 | Sorghum | nucleus, plastid | 16.95 | 16.19 |
| OQU78505 | Sorghum | nucleus | 24.15 | 15.83 |
| EES02214 | Sorghum | mitochondrion, nucleus | 25.0 | 15.61 |
| OQU92638 | Sorghum | mitochondrion | 18.22 | 14.63 |
| EES03313 | Sorghum | nucleus | 25.42 | 14.46 |
| EER92692 | Sorghum | mitochondrion | 19.07 | 14.42 |
| EES18387 | Sorghum | mitochondrion | 20.76 | 13.0 |
| EES11304 | Sorghum | plastid | 21.61 | 12.47 |
| EES01480 | Sorghum | nucleus | 17.37 | 11.58 |
| EES19813 | Sorghum | nucleus | 15.68 | 11.04 |
| KXG33624 | Sorghum | nucleus | 19.92 | 8.66 |
Protein Annotations
| MapMan:15.5.37 | EntrezGene:8062368 | UniProt:C5XQK9 | EnsemblPlants:EES03931 | ProteinID:EES03931 | ProteinID:EES03931.1 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006139 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 |
| GO:GO:0009987 | GO:GO:0045892 | GO:GO:1900457 | InterPro:IPR006458 | InterPro:Ovate | InterPro:Ovate_C |
| PFAM:PF04844 | PFscan:PS51754 | PANTHER:PTHR33057 | PANTHER:PTHR33057:SF64 | EnsemblPlantsGene:SORBI_3003G366000 | TIGRFAMs:TIGR01568 |
| UniParc:UPI0001A8526F | RefSeq:XP_002458811.1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:68236391..68238189
Molecular Weight (calculated)
26247.5 Da
IEP (calculated)
8.945
GRAVY (calculated)
-0.723
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGTGSRSSR RGRGSSFTLR QPPVVDIGCN CRRPKLLSYV FSSSSSLFRG GGKPKSPNAS STSTTTAFTA TTAGGRSGTT ATSTDSSSWG PASFVATNSL
101: YEEPVAVAVA PLQQEQQEAR RRRRQQQHRR RRSRRAAPPA RHGVEEEEEE EEEYGRRVAR ESVAVAVDSA EPYEDFRESM VQMVVEKEIY AWDDLNDLLH
201: QFLSLNSPRH HPLILHAFAD LWTRNGLFCP PSPCQF
101: YEEPVAVAVA PLQQEQQEAR RRRRQQQHRR RRSRRAAPPA RHGVEEEEEE EEEYGRRVAR ESVAVAVDSA EPYEDFRESM VQMVVEKEIY AWDDLNDLLH
201: QFLSLNSPRH HPLILHAFAD LWTRNGLFCP PSPCQF
001: MTTGKSKKKK MVLKAVSVVD IGCGNCKFPS LSSFFNPSPK KPRLYSSNYG HCHSSTPTTA SSSSAVPSTS HWFSDTSSSS ATPSAAAVAV EKDSDDPYLD
101: FRQSMLQMIL ENEIYSKNDL RELLHCFLSL NEPYHHGIII RAFSEIWDGV FSAAKRRGDV QESPLVHRHG SRASHRNHYH RSK
101: FRQSMLQMIL ENEIYSKNDL RELLHCFLSL NEPYHHGIII RAFSEIWDGV FSAAKRRGDV QESPLVHRHG SRASHRNHYH RSK
Arabidopsis Description
Ovate family protein [Source:UniProtKB/TrEMBL;Acc:B3H6R4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.