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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • plastid 1
  • mitochondrion 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra005303.1-P Field mustard mitochondrion, plastid 98.92 98.92
CDY43753 Canola nucleus 83.87 83.87
AT2G36026.1 Thale cress nucleus, plastid 76.88 78.14
Solyc10g082050.1.1 Tomato mitochondrion 46.24 48.31
Solyc01g007800.2.1 Tomato mitochondrion 45.7 46.7
PGSC0003DMT400042334 Potato mitochondrion 44.62 45.11
KRH67981 Soybean mitochondrion 45.7 44.74
KRH32810 Soybean mitochondrion 42.47 44.63
VIT_08s0007g02550.t01 Wine grape mitochondrion, plastid 44.62 44.62
KRH72226 Soybean mitochondrion 41.4 44.25
KRG96237 Soybean mitochondrion 45.16 43.98
PGSC0003DMT400072347 Potato mitochondrion, plastid 44.09 43.39
CDY32706 Canola cytosol 11.29 42.0
CDY02814 Canola cytosol 11.29 42.0
GSMUA_Achr9P02660_001 Banana mitochondrion 30.11 28.28
GSMUA_Achr6P18350_001 Banana mitochondrion 32.26 27.78
GSMUA_Achr6P19470_001 Banana nucleus 26.88 26.88
GSMUA_AchrUn_... Banana mitochondrion 30.11 25.23
GSMUA_Achr5P20250_001 Banana plastid 26.34 23.67
HORVU3Hr1G083700.1 Barley plastid 27.96 23.21
TraesCS3A01G376000.1 Wheat plastid 27.96 23.21
TraesCS3B01G408300.1 Wheat plastid 27.96 23.01
GSMUA_Achr1P03740_001 Banana plastid 21.51 22.99
HORVU1Hr1G049440.1 Barley mitochondrion 30.65 22.89
Os01t0864000-01 Rice mitochondrion, plastid 27.96 22.81
TraesCS1D01G191500.1 Wheat mitochondrion 30.11 22.76
TraesCS1B01G193300.1 Wheat mitochondrion 30.11 22.76
TraesCS1A01G185400.1 Wheat mitochondrion 30.11 22.76
TraesCS3D01G368500.1 Wheat plastid 27.42 22.47
CDY44933 Canola mitochondrion 24.73 22.33
Zm00001d029718_P001 Maize mitochondrion 31.18 22.31
GSMUA_Achr11P... Banana plastid 20.43 22.09
EES03931 Sorghum plastid 27.96 22.03
CDY58970 Canola mitochondrion 25.27 21.96
CDX92512 Canola mitochondrion 25.27 21.96
CDY42284 Canola mitochondrion 24.19 21.74
Zm00001d012282_P001 Maize nucleus, plastid 28.49 21.46
Zm00001d042752_P001 Maize nucleus, plastid 27.96 21.14
EES18304 Sorghum nucleus, plastid 25.81 20.96
TraesCS1A01G275500.1 Wheat nucleus, plastid 25.81 20.96
GSMUA_Achr8P12190_001 Banana plastid 22.04 20.92
TraesCS1B01G284700.1 Wheat plastid 25.27 20.8
TraesCS1D01G275100.1 Wheat plastid 25.27 20.52
HORVU1Hr1G074020.1 Barley nucleus, plastid 24.73 20.26
Zm00001d038283_P001 Maize nucleus 24.73 20.18
Os10t0532600-01 Rice mitochondrion 28.49 20.15
Os02t0679700-01 Rice plastid 30.11 19.93
EER94592 Sorghum mitochondrion 30.11 19.86
Zm00001d047346_P001 Maize mitochondrion 29.03 19.64
Os05t0440900-00 Rice plastid 23.66 19.05
EER92948 Sorghum plastid 24.73 18.04
TraesCS6D01G239400.1 Wheat plastid 28.49 17.91
OQU85631 Sorghum plastid 29.57 17.86
HORVU6Hr1G065900.1 Barley mitochondrion, plastid 28.49 17.85
Zm00001d017606_P001 Maize plastid 27.96 17.81
TraesCS6A01G258000.1 Wheat plastid 27.96 17.81
TraesCS4D01G316300.1 Wheat nucleus, plastid 21.51 17.7
CDX84837 Canola nucleus 22.58 17.5
TraesCS6B01G267100.1 Wheat plastid 27.96 17.45
Zm00001d027453_P001 Maize plastid 23.12 17.41
TraesCS5A01G492400.1 Wheat nucleus 20.97 16.74
CDY36485 Canola nucleus 27.96 16.67
CDY59540 Canola plastid 24.73 15.92
CDY29238 Canola nucleus, plastid 25.81 15.84
CDY04827 Canola nucleus 21.51 15.56
HORVU4Hr1G083150.1 Barley plastid 20.43 15.02
CDY72229 Canola nucleus 25.27 14.97
CDY09945 Canola nucleus, plastid 24.19 14.95
CDY43893 Canola nucleus 25.27 14.92
Os04t0577700-01 Rice nucleus 29.03 14.71
TraesCS2D01G394400.1 Wheat mitochondrion 30.11 14.66
CDY06241 Canola mitochondrion 23.66 14.62
TraesCS2A01G396600.1 Wheat mitochondrion, plastid 29.57 14.51
TraesCS2B01G415000.1 Wheat mitochondrion 29.03 14.44
CDY67505 Canola nucleus, plastid 22.58 13.95
CDY10735 Canola nucleus 23.12 13.92
Zm00001d026061_P001 Maize cytosol, mitochondrion, nucleus, plastid 28.49 13.84
CDY32990 Canola nucleus 20.97 13.64
Zm00001d002594_P001 Maize cytosol, mitochondrion, nucleus, plastid 29.03 13.6
CDY62219 Canola nucleus 22.58 13.59
CDY29674 Canola nucleus 23.66 13.58
CDX97830 Canola nucleus 23.12 13.56
CDY02063 Canola nucleus 22.04 13.18
CDY43860 Canola nucleus 20.43 13.1
EES11304 Sorghum plastid 28.49 12.96
HORVU2Hr1G094240.1 Barley cytosol, mitochondrion, plastid 24.73 12.81
TraesCS4B01G319700.1 Wheat plastid 20.97 12.79
Os03t0126450-00 Rice nucleus 23.12 12.76
CDY09258 Canola mitochondrion 20.97 12.19
CDX78899 Canola mitochondrion 20.97 11.96
CDX99420 Canola mitochondrion 20.97 11.93
CDY01560 Canola nucleus 22.04 11.52
Os01t0831800-00 Rice plastid 16.13 10.83
CDY32705 Canola mitochondrion 10.22 9.41
CDY62560 Canola nucleus 20.43 8.05
CDY02815 Canola plastid 7.53 7.07
Protein Annotations
EnsemblPlants:CDX75076EnsemblPlantsGene:GSBRNA2T00117115001GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0045892InterPro:IPR006458InterPro:OvateInterPro:Ovate_CPANTHER:PTHR33057
PANTHER:PTHR33057:SF17PFAM:PF04844PFscan:PS51754ProteinID:CDX75076ProteinID:CDX75076.1SEG:seg
TIGRFAMs:TIGR01568UniParc:UPI0004EDDACFMapMan:15.5.37:::
Description
BnaA05g08220D
Coordinates
chrLK031802:-:2384334..2385163
Molecular Weight (calculated)
20931.5 Da
IEP (calculated)
9.329
GRAVY (calculated)
-0.487
Length
186 amino acids
Sequence
(BLAST)
001: MAVKSKKKKM FLKAVSVVDI GCSNCKFPTL TSFFNRSSKK PRLYSSTYGH GHSSSTTTTV SSSSNIPSTT HWFSDNVSSS SAATPSAAVA VEKDSDDPYL
101: DFRQSMLQMI LENEIYSKDD LRELLNCFLS LNEPYHHSII IRAFSEIWEG VFSAAVKRRG SVQESPLVRH HGPSRASRDY HNHHYY
Best Arabidopsis Sequence Match ( AT2G36026.1 )
(BLAST)
001: MTTGKSKKKK MVLKAVSVVD IGCGNCKFPS LSSFFNPSPK KPRLYSSNYG HCHSSTPTTA SSSSAVPSTS HWFSDTSSSS ATPSAAAVAV EKDSDDPYLD
101: FRQSMLQMIL ENEIYSKNDL RELLHCFLSL NEPYHHGIII RAFSEIWDGV FSAAKRRGDV QESPLVHRHG SRASHRNHYH RSK
Arabidopsis Description
Ovate family protein [Source:UniProtKB/TrEMBL;Acc:B3H6R4]
SUBAcon: [plastid,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.