Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024464.1-P | Field mustard | cytosol | 27.56 | 98.85 |
| CDY29238 | Canola | nucleus, plastid | 91.99 | 94.72 |
| CDY43893 | Canola | nucleus | 83.65 | 82.86 |
| CDY72229 | Canola | nucleus | 83.33 | 82.8 |
| CDY59540 | Canola | plastid | 75.0 | 80.97 |
| AT2G18500.1 | Thale cress | mitochondrion, plastid | 75.64 | 74.92 |
| CDY02814 | Canola | cytosol | 7.05 | 44.0 |
| CDY32706 | Canola | cytosol | 7.05 | 44.0 |
| KRH50362 | Soybean | cytosol | 13.14 | 32.8 |
| KRH61189 | Soybean | mitochondrion | 25.96 | 31.27 |
| PGSC0003DMT400033048 | Potato | mitochondrion, nucleus, plastid | 34.29 | 30.57 |
| KRH51868 | Soybean | mitochondrion | 24.36 | 30.16 |
| Solyc04g080210.1.1 | Tomato | mitochondrion | 25.64 | 30.08 |
| VIT_18s0001g12310.t01 | Wine grape | mitochondrion | 34.62 | 29.59 |
| CDY44933 | Canola | mitochondrion | 18.91 | 28.64 |
| CDX92512 | Canola | mitochondrion | 19.55 | 28.5 |
| CDY58970 | Canola | mitochondrion | 19.55 | 28.5 |
| PGSC0003DMT400045857 | Potato | mitochondrion | 36.22 | 28.46 |
| Solyc03g034100.2.1 | Tomato | mitochondrion | 35.26 | 28.13 |
| CDX75076 | Canola | nucleus | 16.67 | 27.96 |
| PGSC0003DMT400095058 | Potato | plastid | 21.15 | 27.85 |
| CDY42284 | Canola | mitochondrion | 18.27 | 27.54 |
| GSMUA_Achr4P14010_001 | Banana | nucleus | 18.59 | 26.98 |
| CDY43753 | Canola | nucleus | 15.71 | 26.34 |
| Solyc02g085500.2.1 | Tomato | mitochondrion | 22.44 | 25.18 |
| GSMUA_Achr7P25950_001 | Banana | mitochondrion | 25.0 | 23.78 |
| TraesCS4B01G262000.1 | Wheat | mitochondrion | 19.87 | 22.46 |
| TraesCS4A01G041100.1 | Wheat | mitochondrion | 19.87 | 22.06 |
| TraesCS4D01G262000.1 | Wheat | mitochondrion | 19.55 | 21.94 |
| CDY04827 | Canola | nucleus | 17.31 | 21.01 |
| Os03t0197900-01 | Rice | mitochondrion, plastid | 18.27 | 20.73 |
| Zm00001d000458_P001 | Maize | mitochondrion, plastid | 17.63 | 19.1 |
| EER92692 | Sorghum | mitochondrion | 18.91 | 18.91 |
| HORVU4Hr1G070860.1 | Barley | cytosol, mitochondrion | 20.19 | 18.75 |
| CDX84837 | Canola | nucleus | 13.78 | 17.92 |
| CDY32990 | Canola | nucleus | 16.35 | 17.83 |
| CDY43860 | Canola | nucleus | 16.35 | 17.59 |
| CDX78899 | Canola | mitochondrion | 16.99 | 16.26 |
| CDY09258 | Canola | mitochondrion | 16.67 | 16.25 |
| CDX99420 | Canola | mitochondrion | 16.99 | 16.21 |
| CDX97830 | Canola | nucleus | 16.35 | 16.09 |
| CDY29674 | Canola | nucleus | 16.67 | 16.05 |
| CDY10735 | Canola | nucleus | 15.38 | 15.53 |
| CDY62219 | Canola | nucleus | 15.06 | 15.21 |
| CDY02063 | Canola | nucleus | 15.06 | 15.11 |
| CDY01560 | Canola | nucleus | 16.99 | 14.89 |
| CDY09945 | Canola | nucleus, plastid | 13.46 | 13.95 |
| CDY06241 | Canola | mitochondrion | 13.46 | 13.95 |
| CDY67505 | Canola | nucleus, plastid | 12.82 | 13.29 |
| CDY32705 | Canola | mitochondrion | 7.69 | 11.88 |
| CDY62560 | Canola | nucleus | 16.35 | 10.81 |
| CDY02815 | Canola | plastid | 5.77 | 9.09 |
Protein Annotations
| EnsemblPlants:CDY36485 | EnsemblPlantsGene:GSBRNA2T00062146001 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045892 | InterPro:IPR006458 | InterPro:Ovate | InterPro:Ovate_C | PANTHER:PTHR33057 |
| PANTHER:PTHR33057:SF68 | PFAM:PF04844 | PFscan:PS51754 | ProteinID:CDY36485 | ProteinID:CDY36485.1 | SEG:seg |
| TIGRFAMs:TIGR01568 | UniParc:UPI0004EF3B54 | UniProt:A0A078HDQ1 | MapMan:15.5.37 | : | : |
Description
BnaC03g48440DBnaC03g48440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HDQ1]
Coordinates
chrLK032377:+:111217..112155
Molecular Weight (calculated)
35179.4 Da
IEP (calculated)
10.196
GRAVY (calculated)
-0.786
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRFKLKISR ILSFKSCRSK DSSDLPFNPV PSLPRRPPPS ADPSTTVPKR CRSSFRQHVL TTFGCGSSRR RSSTPLDISR RNSTSVSPPQ TPTFQWESEG
101: KWRVIAQEDE GEYETPRRKI YDGDDRRRLV KKERYARRRG STSSAEEETE RESLLPSSTN LSPESSSSGL PRVTRLRRNP PTRKSESSLI AEEKSESSSS
201: PALSPARLSS FVQRLIPCTA TSAVAMEGVA VVKRSEDPYE DFKGSMMEMI VEKNMSEMAE LEQLLSCFLT LNAKRHHRAI VRAFSEVWIA LFSGGNDGSR
301: RSSVQLSDYD EC
101: KWRVIAQEDE GEYETPRRKI YDGDDRRRLV KKERYARRRG STSSAEEETE RESLLPSSTN LSPESSSSGL PRVTRLRRNP PTRKSESSLI AEEKSESSSS
201: PALSPARLSS FVQRLIPCTA TSAVAMEGVA VVKRSEDPYE DFKGSMMEMI VEKNMSEMAE LEQLLSCFLT LNAKRHHRAI VRAFSEVWIA LFSGGNDGSR
301: RSSVQLSDYD EC
001: MTKRFKLKIS RILSFKSCRL KDPSSLPFNP VSSSLRRTSP LVNSSADVTT VPQRRRSSFR LHVLTVFGCG RSSTPLDVDL RNSPVLSPPQ TPTFQWESEG
101: KWHVIAQVTE EEYETPRRKI YNGGSEKDNR RRLKKKEKSN SRRRGSISSA EEETDRESLL PSSTNLSPEY SSSELPRVTR RPRQLLKKAV IEEESESSSP
201: PPSPARLSSF VQRLMPCTMA AAVMVEGVAV VKKSEDPYED FKGSMMEMIV EKKMFEVAEL EQLLSCFLSL NAKRHHRAIV RAFSEIWVAL FSGGSGGGRR
301: SSSFSSVRLS DYDEC
101: KWHVIAQVTE EEYETPRRKI YNGGSEKDNR RRLKKKEKSN SRRRGSISSA EEETDRESLL PSSTNLSPEY SSSELPRVTR RPRQLLKKAV IEEESESSSP
201: PPSPARLSSF VQRLMPCTMA AAVMVEGVAV VKKSEDPYED FKGSMMEMIV EKKMFEVAEL EQLLSCFLSL NAKRHHRAIV RAFSEIWVAL FSGGSGGGRR
301: SSSFSSVRLS DYDEC
Arabidopsis Description
OFP7Transcription repressor OFP7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU65]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.