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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 4
  • plastid 4
  • cytosol 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc04g080210.1.1 Tomato mitochondrion 96.2 85.71
Bra024464.1-P Field mustard cytosol 17.72 48.28
KRH50362 Soybean cytosol 21.94 41.6
PGSC0003DMT400050511 Potato cytosol 17.72 30.22
GSMUA_Achr4P14010_001 Banana nucleus 24.89 27.44
KRH61189 Soybean mitochondrion 29.11 26.64
KRH51868 Soybean mitochondrion 28.27 26.59
PGSC0003DMT400042334 Potato mitochondrion 19.83 25.54
PGSC0003DMT400000838 Potato nucleus 28.69 24.29
PGSC0003DMT400072347 Potato mitochondrion, plastid 18.99 23.81
CDY59540 Canola plastid 26.58 21.8
AT2G18500.1 Thale cress mitochondrion, plastid 28.69 21.59
CDY29238 Canola nucleus, plastid 27.43 21.45
VIT_18s0001g12310.t01 Wine grape mitochondrion 32.91 21.37
CDY36485 Canola nucleus 27.85 21.15
PGSC0003DMT400033048 Potato mitochondrion, nucleus, plastid 31.22 21.14
CDY72229 Canola nucleus 27.85 21.02
Bra039604.1-P Field mustard nucleus 27.85 20.95
CDY43893 Canola nucleus 27.85 20.95
GSMUA_Achr7P25950_001 Banana mitochondrion 28.69 20.73
PGSC0003DMT400045857 Potato mitochondrion 32.49 19.4
TraesCS4B01G262000.1 Wheat mitochondrion 22.36 19.2
TraesCS4D01G262000.1 Wheat mitochondrion 21.94 18.7
TraesCS4A01G041100.1 Wheat mitochondrion 21.94 18.51
Zm00001d000458_P001 Maize mitochondrion, plastid 21.94 18.06
Os03t0197900-01 Rice mitochondrion, plastid 20.68 17.82
PGSC0003DMT400011286 Potato nucleus 20.25 16.9
EER92692 Sorghum mitochondrion 21.94 16.67
HORVU4Hr1G070860.1 Barley cytosol, mitochondrion 21.94 15.48
PGSC0003DMT400037629 Potato plastid 25.32 14.22
PGSC0003DMT400078126 Potato nucleus 20.25 13.68
PGSC0003DMT400073252 Potato nucleus 18.57 10.73
Protein Annotations
EnsemblPlants:PGSC0003DMT400095058EnsemblPlantsGene:PGSC0003DMG400044629GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0045892InterPro:IPR006458InterPro:OvateInterPro:Ovate_CPANTHER:PTHR33057
PANTHER:PTHR33057:SF68PFAM:PF04844PFscan:PS51754PGSC:PGSC0003DMG400044629SEG:segTIGRFAMs:TIGR01568
UniParc:UPI000295933FUniProt:M1DVH5MapMan:15.5.37:::
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400044629]
Coordinates
chr4:-:69602398..69603111
Molecular Weight (calculated)
27390.2 Da
IEP (calculated)
7.010
GRAVY (calculated)
-0.773
Length
237 amino acids
Sequence
(BLAST)
001: MPLSLYKFPP ANILDNSPVP VPPSTPHHPY IFRKAHNLAS KTYNSPSSEY SDHDNNNMRR GESRKSRLNM SFSSVDSGWF SFNSECCDEK PNDETESFIS
101: SPSFESSFDV DHGHDPLSGI RRKKNNNNTK VRRLRRYLSN SFKDSMMPCM ADGKVNESFA IVKRSADPYD DFKKSMKEMI LEKEMFEAED LEQLLLCFLS
201: LNSRHHHAII VEAFTEIWEE LFGKSSKSMD LKLPRFQ
Best Arabidopsis Sequence Match ( AT2G18500.1 )
(BLAST)
001: MTKRFKLKIS RILSFKSCRL KDPSSLPFNP VSSSLRRTSP LVNSSADVTT VPQRRRSSFR LHVLTVFGCG RSSTPLDVDL RNSPVLSPPQ TPTFQWESEG
101: KWHVIAQVTE EEYETPRRKI YNGGSEKDNR RRLKKKEKSN SRRRGSISSA EEETDRESLL PSSTNLSPEY SSSELPRVTR RPRQLLKKAV IEEESESSSP
201: PPSPARLSSF VQRLMPCTMA AAVMVEGVAV VKKSEDPYED FKGSMMEMIV EKKMFEVAEL EQLLSCFLSL NAKRHHRAIV RAFSEIWVAL FSGGSGGGRR
301: SSSFSSVRLS DYDEC
Arabidopsis Description
OFP7Transcription repressor OFP7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU65]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.