Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 4
- cytosol 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc04g080210.1.1 | Tomato | mitochondrion | 96.2 | 85.71 |
Bra024464.1-P | Field mustard | cytosol | 17.72 | 48.28 |
KRH50362 | Soybean | cytosol | 21.94 | 41.6 |
PGSC0003DMT400050511 | Potato | cytosol | 17.72 | 30.22 |
GSMUA_Achr4P14010_001 | Banana | nucleus | 24.89 | 27.44 |
KRH61189 | Soybean | mitochondrion | 29.11 | 26.64 |
KRH51868 | Soybean | mitochondrion | 28.27 | 26.59 |
PGSC0003DMT400042334 | Potato | mitochondrion | 19.83 | 25.54 |
PGSC0003DMT400000838 | Potato | nucleus | 28.69 | 24.29 |
PGSC0003DMT400072347 | Potato | mitochondrion, plastid | 18.99 | 23.81 |
CDY59540 | Canola | plastid | 26.58 | 21.8 |
AT2G18500.1 | Thale cress | mitochondrion, plastid | 28.69 | 21.59 |
CDY29238 | Canola | nucleus, plastid | 27.43 | 21.45 |
VIT_18s0001g12310.t01 | Wine grape | mitochondrion | 32.91 | 21.37 |
CDY36485 | Canola | nucleus | 27.85 | 21.15 |
PGSC0003DMT400033048 | Potato | mitochondrion, nucleus, plastid | 31.22 | 21.14 |
CDY72229 | Canola | nucleus | 27.85 | 21.02 |
Bra039604.1-P | Field mustard | nucleus | 27.85 | 20.95 |
CDY43893 | Canola | nucleus | 27.85 | 20.95 |
GSMUA_Achr7P25950_001 | Banana | mitochondrion | 28.69 | 20.73 |
PGSC0003DMT400045857 | Potato | mitochondrion | 32.49 | 19.4 |
TraesCS4B01G262000.1 | Wheat | mitochondrion | 22.36 | 19.2 |
TraesCS4D01G262000.1 | Wheat | mitochondrion | 21.94 | 18.7 |
TraesCS4A01G041100.1 | Wheat | mitochondrion | 21.94 | 18.51 |
Zm00001d000458_P001 | Maize | mitochondrion, plastid | 21.94 | 18.06 |
Os03t0197900-01 | Rice | mitochondrion, plastid | 20.68 | 17.82 |
PGSC0003DMT400011286 | Potato | nucleus | 20.25 | 16.9 |
EER92692 | Sorghum | mitochondrion | 21.94 | 16.67 |
HORVU4Hr1G070860.1 | Barley | cytosol, mitochondrion | 21.94 | 15.48 |
PGSC0003DMT400037629 | Potato | plastid | 25.32 | 14.22 |
PGSC0003DMT400078126 | Potato | nucleus | 20.25 | 13.68 |
PGSC0003DMT400073252 | Potato | nucleus | 18.57 | 10.73 |
Protein Annotations
EnsemblPlants:PGSC0003DMT400095058 | EnsemblPlantsGene:PGSC0003DMG400044629 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
GO:GO:0009987 | GO:GO:0045892 | InterPro:IPR006458 | InterPro:Ovate | InterPro:Ovate_C | PANTHER:PTHR33057 |
PANTHER:PTHR33057:SF68 | PFAM:PF04844 | PFscan:PS51754 | PGSC:PGSC0003DMG400044629 | SEG:seg | TIGRFAMs:TIGR01568 |
UniParc:UPI000295933F | UniProt:M1DVH5 | MapMan:15.5.37 | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400044629]
Coordinates
chr4:-:69602398..69603111
Molecular Weight (calculated)
27390.2 Da
IEP (calculated)
7.010
GRAVY (calculated)
-0.773
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLSLYKFPP ANILDNSPVP VPPSTPHHPY IFRKAHNLAS KTYNSPSSEY SDHDNNNMRR GESRKSRLNM SFSSVDSGWF SFNSECCDEK PNDETESFIS
101: SPSFESSFDV DHGHDPLSGI RRKKNNNNTK VRRLRRYLSN SFKDSMMPCM ADGKVNESFA IVKRSADPYD DFKKSMKEMI LEKEMFEAED LEQLLLCFLS
201: LNSRHHHAII VEAFTEIWEE LFGKSSKSMD LKLPRFQ
101: SPSFESSFDV DHGHDPLSGI RRKKNNNNTK VRRLRRYLSN SFKDSMMPCM ADGKVNESFA IVKRSADPYD DFKKSMKEMI LEKEMFEAED LEQLLLCFLS
201: LNSRHHHAII VEAFTEIWEE LFGKSSKSMD LKLPRFQ
001: MTKRFKLKIS RILSFKSCRL KDPSSLPFNP VSSSLRRTSP LVNSSADVTT VPQRRRSSFR LHVLTVFGCG RSSTPLDVDL RNSPVLSPPQ TPTFQWESEG
101: KWHVIAQVTE EEYETPRRKI YNGGSEKDNR RRLKKKEKSN SRRRGSISSA EEETDRESLL PSSTNLSPEY SSSELPRVTR RPRQLLKKAV IEEESESSSP
201: PPSPARLSSF VQRLMPCTMA AAVMVEGVAV VKKSEDPYED FKGSMMEMIV EKKMFEVAEL EQLLSCFLSL NAKRHHRAIV RAFSEIWVAL FSGGSGGGRR
301: SSSFSSVRLS DYDEC
101: KWHVIAQVTE EEYETPRRKI YNGGSEKDNR RRLKKKEKSN SRRRGSISSA EEETDRESLL PSSTNLSPEY SSSELPRVTR RPRQLLKKAV IEEESESSSP
201: PPSPARLSSF VQRLMPCTMA AAVMVEGVAV VKKSEDPYED FKGSMMEMIV EKKMFEVAEL EQLLSCFLSL NAKRHHRAIV RAFSEIWVAL FSGGSGGGRR
301: SSSFSSVRLS DYDEC
Arabidopsis Description
OFP7Transcription repressor OFP7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU65]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.