Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g018200.1.1 | Tomato | nucleus | 73.24 | 82.87 |
| KRH65447 | Soybean | nucleus | 50.7 | 37.21 |
| KRH76106 | Soybean | nucleus | 50.35 | 37.14 |
| KRH40761 | Soybean | nucleus | 49.3 | 36.27 |
| KRH00468 | Soybean | nucleus | 45.77 | 35.42 |
| VIT_08s0058g01110.t01 | Wine grape | nucleus | 47.89 | 32.3 |
| PGSC0003DMT400078126 | Potato | nucleus | 39.44 | 31.91 |
| PGSC0003DMT400050511 | Potato | cytosol | 14.44 | 29.5 |
| PGSC0003DMT400000838 | Potato | nucleus | 20.77 | 21.07 |
| PGSC0003DMT400095058 | Potato | plastid | 16.9 | 20.25 |
| PGSC0003DMT400042334 | Potato | mitochondrion | 12.68 | 19.57 |
| PGSC0003DMT400072347 | Potato | mitochondrion, plastid | 12.68 | 19.05 |
| PGSC0003DMT400073252 | Potato | nucleus | 23.24 | 16.1 |
| PGSC0003DMT400033048 | Potato | mitochondrion, nucleus, plastid | 18.31 | 14.86 |
| PGSC0003DMT400045857 | Potato | mitochondrion | 17.96 | 12.85 |
| PGSC0003DMT400037629 | Potato | plastid | 18.66 | 12.56 |
Protein Annotations
| MapMan:15.5.37 | InterPro:DNA_bnd_dom_ovate | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045892 |
| InterPro:IPR006458 | UniProt:M0ZZB6 | InterPro:Ovate | InterPro:Ovate_C | PFAM:PF04844 | PFAM:PF13724 |
| EnsemblPlantsGene:PGSC0003DMG400004418 | PGSC:PGSC0003DMG400004418 | EnsemblPlants:PGSC0003DMT400011286 | PFscan:PS51754 | PANTHER:PTHR33057 | PANTHER:PTHR33057:SF22 |
| TIGRFAMs:TIGR01568 | UniParc:UPI00029524E1 | SEG:seg | : | : | : |
Description
ATOFP3/OFP3 [Source:PGSC_GENE;Acc:PGSC0003DMG400004418]
Coordinates
chr9:+:15532653..15533688
Molecular Weight (calculated)
32509.9 Da
IEP (calculated)
10.789
GRAVY (calculated)
-0.743
Length
284 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNYRFKLSD MVPNAWFYKL KDMAKSRSRS QSRIKREQTS SSSSIFYSSS NFQQHHRKSY YFSRNLSPNN SHQTNVTLSK HIPTSNNIIN FSETSSKYSK
101: KRKNIMRRNT SNSPKCVNSS FSSSSSEPHS SLHSPKSMIL SPSQCRCNDH ILDSVLKIDL PPIITKPKKK GQLKCITVKT EQSTSPKRRI SVSSSSIGVK
201: LRTKSPTIVS RKSVGEKSYA VVKSSKDPQK DFKESMVEMI VKNNIKTSKD LEELLACYLS LNSDHYHHLI IKVFKQIWFD IQLK
101: KRKNIMRRNT SNSPKCVNSS FSSSSSEPHS SLHSPKSMIL SPSQCRCNDH ILDSVLKIDL PPIITKPKKK GQLKCITVKT EQSTSPKRRI SVSSSSIGVK
201: LRTKSPTIVS RKSVGEKSYA VVKSSKDPQK DFKESMVEMI VKNNIKTSKD LEELLACYLS LNSDHYHHLI IKVFKQIWFD IQLK
001: MRNYKLRLSV MSPSEWFHKL KNMTKPRKKH SLPLYSINTT KKRKPSSESK SLPYSSTSYF FNRSRSRTSF ESRILQISPR NSLHNIQSKR KTVYKPSPPS
101: SSIVSAGFNK TFHQSHDSLS ASSNLKVISS EDDIIIDMNN RDFKKKTFKE ITKFDSTEKA CRASNRTKET HIPHHLSVKV SKEKEDEEED ACRTKKKHQK
201: TLVSSGRRSS AKSPRIKLRA RSPRIQVSPR RSKSRSQNKQ ILDSFAVIKS SIDPSKDFRE SMVEMIAENN IRTSNDMEDL LVCYLTLNPK EYHDLIIKVF
301: VQVWLEVINS TFASK
101: SSIVSAGFNK TFHQSHDSLS ASSNLKVISS EDDIIIDMNN RDFKKKTFKE ITKFDSTEKA CRASNRTKET HIPHHLSVKV SKEKEDEEED ACRTKKKHQK
201: TLVSSGRRSS AKSPRIKLRA RSPRIQVSPR RSKSRSQNKQ ILDSFAVIKS SIDPSKDFRE SMVEMIAENN IRTSNDMEDL LVCYLTLNPK EYHDLIIKVF
301: VQVWLEVINS TFASK
Arabidopsis Description
OFP4Transcription repressor OFP4 [Source:UniProtKB/Swiss-Prot;Acc:F4HNU8]
SUBAcon: [mitochondrion,plastid,nucleus]
SUBAcon: [mitochondrion,plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.