Factsheet for PGSC0003DMT400045857

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g034100.2.1	Tomato	mitochondrion	88.67	90.03
Bra024464.1-P	Field mustard	cytosol	11.59	52.87
KRH50362	Soybean	cytosol	13.35	42.4
PGSC0003DMT400033048	Potato	mitochondrion, nucleus, plastid	36.02	40.86
AT2G18500.1	Thale cress	mitochondrion, plastid	30.23	38.1
CDY29238	Canola	nucleus, plastid	28.97	37.95
CDY43893	Canola	nucleus	29.22	36.83
Bra039604.1-P	Field mustard	nucleus	29.22	36.83
CDY72229	Canola	nucleus	28.97	36.62
CDY36485	Canola	nucleus	28.46	36.22
CDY59540	Canola	plastid	25.44	34.95
KRH51868	Soybean	mitochondrion	21.41	33.73
KRH61189	Soybean	mitochondrion	21.41	32.82
PGSC0003DMT400095058	Potato	plastid	19.4	32.49
VIT_18s0001g12310.t01	Wine grape	mitochondrion	29.72	32.33
GSMUA_Achr4P14010_001	Banana	nucleus	16.37	30.23
PGSC0003DMT400050511	Potato	cytosol	10.33	29.5
PGSC0003DMT400042334	Potato	mitochondrion	12.85	27.72
PGSC0003DMT400000838	Potato	nucleus	18.89	26.79
PGSC0003DMT400072347	Potato	mitochondrion, plastid	12.59	26.45
GSMUA_Achr7P25950_001	Banana	mitochondrion	18.64	22.56
PGSC0003DMT400011286	Potato	nucleus	12.85	17.96
Os03t0197900-01	Rice	mitochondrion, plastid	12.34	17.82
PGSC0003DMT400078126	Potato	nucleus	15.37	17.38
PGSC0003DMT400037629	Potato	plastid	18.14	17.06
TraesCS4B01G262000.1	Wheat	mitochondrion	11.84	17.03
TraesCS4D01G262000.1	Wheat	mitochondrion	11.84	16.91
TraesCS4A01G041100.1	Wheat	mitochondrion	11.59	16.37
EER92692	Sorghum	mitochondrion	12.85	16.35
Zm00001d000458_P001	Maize	mitochondrion, plastid	11.84	16.32
HORVU4Hr1G070860.1	Barley	cytosol, mitochondrion	12.09	14.29
PGSC0003DMT400073252	Potato	nucleus	12.09	11.71

Protein Annotations

EnsemblPlants:PGSC0003DMT400045857	EnsemblPlantsGene:PGSC0003DMG400017788	EntrezGene:102580284	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0045892	InterPro:IPR006458	InterPro:Ovate	InterPro:Ovate_C
PANTHER:PTHR33057	PANTHER:PTHR33057:SF68	PFAM:PF04844	PFscan:PS51754	PGSC:PGSC0003DMG400017788	RefSeq:XP_006366994.2
SEG:seg	TIGRFAMs:TIGR01568	UniParc:UPI000294B2FA	UniProt:M1BIB0	MapMan:15.5.37	:

Description

Ovate [Source:PGSC_GENE;Acc:PGSC0003DMG400017788]

Coordinates

chr3:+:4403368..4405474

Molecular Weight (calculated)

45688.4 Da

IEP (calculated)

7.082

GRAVY (calculated)

-0.827

Length

397 amino acids

Sequence
(BLAST)

001: MSKLLKFRIS KAISSSFHSC RSKDPCTLPQ HPVPSFLQNT QFITIDHLLF EEMIHQDNES QLISTHHDHF PIITSPSFKH HVSVTPITAG GQCSSRNGEA
101: FSTTSDDSHT RSPSHEFKWK KEEDKWQHFV KTTSDDDTKQ QPRRKISYPF ISDDSDNDEV LTEINKRQSS RKKKISTSKT KFLMMMNTTS PSSSMNENEI
201: NFTSKKANWD YHEDIDITNE DEEDETETFI SSSCKSHVEF SDDSSSNFSQ EFDTIYKNTT RRCQKKIGFC KRRDVKNTRS NVSRGMNNIG KRLSISTSTT
301: SSDGELPPRL SVFKKLIPCN VEGKVKESFA IVKKSEDPYE DFKSSMMEMI LEKKMFEKND LEQLLECFLS LNAKNCHGVI VEAFSEIWKT LFSPNHS

Best Arabidopsis Sequence Match ( AT2G18500.1 )
(BLAST)

001: MTKRFKLKIS RILSFKSCRL KDPSSLPFNP VSSSLRRTSP LVNSSADVTT VPQRRRSSFR LHVLTVFGCG RSSTPLDVDL RNSPVLSPPQ TPTFQWESEG
101: KWHVIAQVTE EEYETPRRKI YNGGSEKDNR RRLKKKEKSN SRRRGSISSA EEETDRESLL PSSTNLSPEY SSSELPRVTR RPRQLLKKAV IEEESESSSP
201: PPSPARLSSF VQRLMPCTMA AAVMVEGVAV VKKSEDPYED FKGSMMEMIV EKKMFEVAEL EQLLSCFLSL NAKRHHRAIV RAFSEIWVAL FSGGSGGGRR
301: SSSFSSVRLS DYDEC

Arabidopsis Description

OFP7Transcription repressor OFP7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU65]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.