Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 6
- nucleus 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| PGSC0003DMT400012712 | |
| PGSC0003DMT400058528 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G52525.1 | PGSC0003DMT400058528 | AT1G62990.1 | 15781858 |
| AT3G52525.1 | PGSC0003DMT400012712 | AT4G08150.1 | 15781858 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g007800.2.1 | Tomato | mitochondrion | 95.11 | 96.15 |
| PGSC0003DMT400072347 | Potato | mitochondrion, plastid | 70.11 | 68.25 |
| VIT_08s0007g02550.t01 | Wine grape | mitochondrion, plastid | 61.41 | 60.75 |
| KRH67981 | Soybean | mitochondrion | 55.98 | 54.21 |
| KRH72226 | Soybean | mitochondrion | 51.09 | 54.02 |
| KRH32810 | Soybean | mitochondrion | 51.63 | 53.67 |
| KRG96237 | Soybean | mitochondrion | 55.43 | 53.4 |
| PGSC0003DMT400050511 | Potato | cytosol | 34.78 | 46.04 |
| AT3G52525.1 | Thale cress | plastid | 39.67 | 45.91 |
| CDY43753 | Canola | nucleus | 45.65 | 45.16 |
| Bra017266.1-P | Field mustard | nucleus | 45.65 | 45.16 |
| CDX75076 | Canola | nucleus | 45.11 | 44.62 |
| Bra005303.1-P | Field mustard | mitochondrion, plastid | 44.57 | 44.09 |
| AT2G36026.1 | Thale cress | nucleus, plastid | 43.48 | 43.72 |
| GSMUA_Achr9P02660_001 | Banana | mitochondrion | 34.24 | 31.82 |
| GSMUA_Achr6P19470_001 | Banana | nucleus | 30.98 | 30.65 |
| GSMUA_Achr6P18350_001 | Banana | mitochondrion | 35.33 | 30.09 |
| TraesCS3A01G376000.1 | Wheat | plastid | 34.78 | 28.57 |
| HORVU3Hr1G083700.1 | Barley | plastid | 34.78 | 28.57 |
| TraesCS3B01G408300.1 | Wheat | plastid | 34.78 | 28.32 |
| TraesCS3D01G368500.1 | Wheat | plastid | 34.24 | 27.75 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 33.15 | 27.48 |
| Os01t0864000-01 | Rice | mitochondrion, plastid | 33.15 | 26.75 |
| EES03931 | Sorghum | plastid | 33.7 | 26.27 |
| Zm00001d042752_P001 | Maize | nucleus, plastid | 33.7 | 25.2 |
| GSMUA_Achr5P20250_001 | Banana | plastid | 27.72 | 24.64 |
| TraesCS1D01G191500.1 | Wheat | mitochondrion | 32.61 | 24.39 |
| Zm00001d012282_P001 | Maize | nucleus, plastid | 32.61 | 24.29 |
| TraesCS1B01G193300.1 | Wheat | mitochondrion | 32.07 | 23.98 |
| TraesCS1A01G185400.1 | Wheat | mitochondrion | 32.07 | 23.98 |
| TraesCS1B01G284700.1 | Wheat | plastid | 29.35 | 23.89 |
| GSMUA_Achr11P... | Banana | plastid | 22.28 | 23.84 |
| HORVU1Hr1G074020.1 | Barley | nucleus, plastid | 29.35 | 23.79 |
| HORVU1Hr1G049440.1 | Barley | mitochondrion | 32.07 | 23.69 |
| TraesCS1A01G275500.1 | Wheat | nucleus, plastid | 29.35 | 23.58 |
| TraesCS1D01G275100.1 | Wheat | plastid | 29.35 | 23.58 |
| EES18304 | Sorghum | nucleus, plastid | 28.8 | 23.14 |
| Zm00001d029718_P001 | Maize | mitochondrion | 32.61 | 23.08 |
| Zm00001d038283_P001 | Maize | nucleus | 28.26 | 22.81 |
| GSMUA_Achr8P12190_001 | Banana | plastid | 23.37 | 21.94 |
| GSMUA_Achr1P03740_001 | Banana | plastid | 20.65 | 21.84 |
| Os10t0532600-01 | Rice | mitochondrion | 30.98 | 21.67 |
| Os05t0440900-00 | Rice | plastid | 27.17 | 21.64 |
| EER94592 | Sorghum | mitochondrion | 33.15 | 21.63 |
| Zm00001d047346_P001 | Maize | mitochondrion | 32.07 | 21.45 |
| PGSC0003DMT400095058 | Potato | plastid | 25.54 | 19.83 |
| Os02t0679700-01 | Rice | plastid | 29.89 | 19.57 |
| PGSC0003DMT400000838 | Potato | nucleus | 29.35 | 19.29 |
| OQU85631 | Sorghum | plastid | 29.89 | 17.86 |
| TraesCS6D01G239400.1 | Wheat | plastid | 28.26 | 17.57 |
| HORVU6Hr1G065900.1 | Barley | mitochondrion, plastid | 28.26 | 17.51 |
| Zm00001d017606_P001 | Maize | plastid | 27.72 | 17.47 |
| TraesCS6A01G258000.1 | Wheat | plastid | 27.17 | 17.12 |
| TraesCS6B01G267100.1 | Wheat | plastid | 27.72 | 17.11 |
| TraesCS4D01G316300.1 | Wheat | nucleus, plastid | 20.65 | 16.81 |
| EER92948 | Sorghum | plastid | 22.83 | 16.47 |
| Zm00001d027453_P001 | Maize | plastid | 21.74 | 16.19 |
| TraesCS5A01G492400.1 | Wheat | nucleus | 20.11 | 15.88 |
| Zm00001d026061_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 30.98 | 14.88 |
| HORVU4Hr1G083150.1 | Barley | plastid | 20.11 | 14.62 |
| Os04t0577700-01 | Rice | nucleus | 28.8 | 14.44 |
| TraesCS2B01G415000.1 | Wheat | mitochondrion | 29.35 | 14.44 |
| TraesCS2D01G394400.1 | Wheat | mitochondrion | 29.89 | 14.4 |
| Zm00001d002594_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 30.98 | 14.36 |
| PGSC0003DMT400033048 | Potato | mitochondrion, nucleus, plastid | 27.17 | 14.29 |
| TraesCS2A01G396600.1 | Wheat | mitochondrion, plastid | 29.35 | 14.25 |
| EES11304 | Sorghum | plastid | 30.43 | 13.69 |
| HORVU2Hr1G094240.1 | Barley | cytosol, mitochondrion, plastid | 25.54 | 13.09 |
| PGSC0003DMT400045857 | Potato | mitochondrion | 27.72 | 12.85 |
| PGSC0003DMT400037629 | Potato | plastid | 29.35 | 12.8 |
| PGSC0003DMT400011286 | Potato | nucleus | 19.57 | 12.68 |
| Os03t0126450-00 | Rice | nucleus | 22.83 | 12.46 |
| TraesCS4B01G319700.1 | Wheat | plastid | 20.11 | 12.13 |
| PGSC0003DMT400078126 | Potato | nucleus | 22.28 | 11.68 |
| Os01t0831800-00 | Rice | plastid | 16.85 | 11.19 |
| PGSC0003DMT400073252 | Potato | nucleus | 21.74 | 9.76 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400042334 | EnsemblPlantsGene:PGSC0003DMG400016415 | EntrezGene:102586159 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045892 | InterPro:IPR006458 | InterPro:Ovate | InterPro:Ovate_C |
| PANTHER:PTHR33057 | PANTHER:PTHR33057:SF17 | PFAM:PF04844 | PFscan:PS51754 | PGSC:PGSC0003DMG400016415 | RefSeq:XP_006348492.1 |
| SEG:seg | TIGRFAMs:TIGR01568 | UniParc:UPI000295A98D | UniProt:M1BCV1 | MapMan:15.5.37 | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400016415]
Coordinates
chr1:+:3359907..3360814
Molecular Weight (calculated)
20578.2 Da
IEP (calculated)
9.400
GRAVY (calculated)
-0.532
Length
184 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTHRRRIIL SNVTVKLGCS SSCIRPKLSS IFHPKPRNRK SPKSQTHNKN YSNYSSCSSW DTTTTTFSPH SDATTNESSD FRTSKAVQGF GRIGGESVAV
101: EKDSDDPYLD FRQSMLQMIL EKEIYSKDDL KELLNCFLQL NSPYYHGVIV RAFTEIWNGV FSLRPGVAGA SSPFLHGGGH VTYS
101: EKDSDDPYLD FRQSMLQMIL EKEIYSKDDL KELLNCFLQL NSPYYHGVIV RAFTEIWNGV FSLRPGVAGA SSPFLHGGGH VTYS
001: MTTGKSKKKK MVLKAVSVVD IGCGNCKFPS LSSFFNPSPK KPRLYSSNYG HCHSSTPTTA SSSSAVPSTS HWFSDTSSSS ATPSAAAVAV EKDSDDPYLD
101: FRQSMLQMIL ENEIYSKNDL RELLHCFLSL NEPYHHGIII RAFSEIWDGV FSAAKRRGDV QESPLVHRHG SRASHRNHYH RSK
101: FRQSMLQMIL ENEIYSKNDL RELLHCFLSL NEPYHHGIII RAFSEIWDGV FSAAKRRGDV QESPLVHRHG SRASHRNHYH RSK
Arabidopsis Description
Ovate family protein [Source:UniProtKB/TrEMBL;Acc:B3H6R4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.