Factsheet for Zm00001d026061_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d007842_P002
Zm00001d013559_P001
Zm00001d018742_P001
Zm00001d027431_P002
Zm00001d033404_P002
Zm00001d033859_P002
Zm00001d033861_P001
Zm00001d034212_P001
Zm00001d048471_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G52525.1	Zm00001d027431_P002	AT1G62990.1	15781858
AT3G52525.1	Zm00001d048471_P001	AT1G62990.1	15781858
AT3G52525.1	Zm00001d007842_P002	AT4G08150.1	15781858
AT3G52525.1	Zm00001d013559_P001	AT4G08150.1	15781858
AT3G52525.1	Zm00001d018742_P001	AT4G08150.1	15781858
AT3G52525.1	Zm00001d033404_P002	AT4G08150.1	15781858
AT3G52525.1	Zm00001d033859_P002	AT4G08150.1	15781858
AT3G52525.1	Zm00001d033861_P001	AT4G08150.1	15781858
AT3G52525.1	Zm00001d034212_P001	AT4G08150.1	15781858

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002594_P001	Maize	cytosol, mitochondrion, nucleus, plastid	75.72	73.05
EES11304	Sorghum	plastid	77.55	72.62
Os04t0577700-01	Rice	nucleus	57.44	59.95
TraesCS2A01G396600.1	Wheat	mitochondrion, plastid	54.31	54.88
TraesCS2D01G394400.1	Wheat	mitochondrion	54.05	54.19
TraesCS2B01G415000.1	Wheat	mitochondrion	52.74	54.01
GSMUA_Achr1P03740_001	Banana	plastid	21.67	47.7
HORVU2Hr1G094240.1	Barley	cytosol, mitochondrion, plastid	44.65	47.63
Zm00001d017606_P001	Maize	plastid	33.16	43.49
GSMUA_Achr11P...	Banana	plastid	19.32	43.02
GSMUA_Achr5P20250_001	Banana	plastid	22.45	41.55
GSMUA_Achr8P12190_001	Banana	plastid	20.89	40.82
Solyc11g068780.1.1	Tomato	cytosol	13.05	36.5
Zm00001d029718_P001	Maize	mitochondrion	23.76	35.0
PGSC0003DMT400050511	Potato	cytosol	12.53	34.53
KRH26670	Soybean	mitochondrion	16.19	33.33
KRH22646	Soybean	mitochondrion, nucleus	15.93	33.15
Zm00001d027453_P001	Maize	plastid	21.15	32.79
AT3G52525.1	Thale cress	plastid	13.58	32.7
Solyc10g082050.1.1	Tomato	mitochondrion	14.88	32.02
Solyc01g007800.2.1	Tomato	mitochondrion	14.88	31.32
Zm00001d047346_P001	Maize	mitochondrion	22.45	31.27
PGSC0003DMT400042334	Potato	mitochondrion	14.88	30.98
PGSC0003DMT400072347	Potato	mitochondrion, plastid	15.14	30.69
VIT_08s0007g02550.t01	Wine grape	mitochondrion, plastid	14.88	30.65
KRH67981	Soybean	mitochondrion	15.14	30.53
KRH32810	Soybean	mitochondrion	14.1	30.51
KRG96237	Soybean	mitochondrion	14.88	29.84
KRH72226	Soybean	mitochondrion	13.05	28.74
KRH25295	Soybean	nucleus, plastid	14.62	28.72
CDX75076	Canola	nucleus	13.84	28.49
Bra005303.1-P	Field mustard	mitochondrion, plastid	13.84	28.49
KRH30374	Soybean	nucleus, plastid	14.62	28.43
AT2G36026.1	Thale cress	nucleus, plastid	13.58	28.42
CDY43753	Canola	nucleus	13.58	27.96
Bra017266.1-P	Field mustard	nucleus	13.58	27.96
Zm00001d038283_P001	Maize	nucleus	13.84	23.25
Zm00001d042752_P001	Maize	nucleus, plastid	14.1	21.95
Zm00001d012282_P001	Maize	nucleus, plastid	13.32	20.65
Zm00001d037814_P001	Maize	plastid	14.36	19.37
Zm00001d007168_P001	Maize	mitochondrion	11.23	18.45
Zm00001d022446_P001	Maize	nucleus	11.49	17.89
Zm00001d000458_P001	Maize	mitochondrion, plastid	13.05	17.36
Zm00001d009993_P001	Maize	nucleus, plastid	11.49	16.99
Zm00001d029067_P001	Maize	mitochondrion	12.01	16.49
Zm00001d039313_P001	Maize	mitochondrion	16.19	16.45
Zm00001d044167_P001	Maize	mitochondrion, nucleus	16.97	15.26
Zm00001d043046_P001	Maize	peroxisome	14.1	14.67
Zm00001d011410_P001	Maize	nucleus, plastid	15.14	14.54
Zm00001d043470_P001	Maize	mitochondrion, nucleus	12.01	13.61
Zm00001d038714_P001	Maize	nucleus	10.97	13.33
Zm00001d038473_P001	Maize	mitochondrion	12.53	13.11
Zm00001d012498_P001	Maize	nucleus	12.01	12.74

Protein Annotations

EnsemblPlants:Zm00001d026061_P001	EnsemblPlants:Zm00001d026061_T001	EnsemblPlantsGene:Zm00001d026061	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0045892	InterPro:IPR006458	InterPro:Ovate	InterPro:Ovate_C
PANTHER:PTHR33057	PANTHER:PTHR33057:SF6	PFAM:PF04844	PFscan:PS51754	ProteinID:AQK45417.1	SEG:seg
TIGRFAMs:TIGR01568	UniParc:UPI0002217521	UniProt:K7UKY4	MapMan:15.5.37	:	:

Description

OVATE-transcription factor 41Plant-specific domain TIGR01568 family protein

Coordinates

chr10:-:137306305..137307456

Molecular Weight (calculated)

40855.9 Da

IEP (calculated)

10.204

GRAVY (calculated)

-0.673

Length

383 amino acids

Sequence
(BLAST)

001: MSAAAAGAKK RLSVGAIAGG GFALGCGCRD AKAVAVAVAS SAAASTSPYS AAGTETTTTT ATTATWRRAR TPPHRPSSSA SGSTGTLTVP SASSSSSFPW
101: ERADAEGDGD AGEEVDCKGE ATTTTSFSGL LRQLNELEQS VVSWGRKSAS KDHLSPPPRP LPALPVKQRL AHSCDGDRKE GHGNFSPPPP PPHFQFQITQ
201: QRQKAKSMDK GDRQVEVAHS KSMQPPPPPP PPPPPLPLQP ERQFKAQSTD DDKGGKKEDA SMFPTPPQAP YHLKSKSSVL DGSVGVAVVK QSDDPLGDFR
301: RSMVNMIVEN RIVTGEELRE LLRHFLALNA PRHHEAILAA FTEIWDEAFS ARTTTTMATP PRPRPSAPTP PRRRHAPPTR SWR

Best Arabidopsis Sequence Match ( AT2G36026.1 )
(BLAST)

001: MTTGKSKKKK MVLKAVSVVD IGCGNCKFPS LSSFFNPSPK KPRLYSSNYG HCHSSTPTTA SSSSAVPSTS HWFSDTSSSS ATPSAAAVAV EKDSDDPYLD
101: FRQSMLQMIL ENEIYSKNDL RELLHCFLSL NEPYHHGIII RAFSEIWDGV FSAAKRRGDV QESPLVHRHG SRASHRNHYH RSK

Arabidopsis Description

Ovate family protein [Source:UniProtKB/TrEMBL;Acc:B3H6R4]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.