Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d048471_P001 | Maize | nucleus | 95.48 | 93.08 |
| KXG40306 | Sorghum | nucleus | 95.48 | 91.64 |
| Os03t0123500-02 | Rice | nucleus | 92.58 | 91.4 |
| TraesCS5A01G515000.1 | Wheat | nucleus | 89.35 | 88.78 |
| TraesCS4B01G346100.1 | Wheat | nucleus | 89.35 | 88.78 |
| TraesCS4D01G341000.1 | Wheat | nucleus | 88.39 | 88.1 |
| HORVU4Hr1G084680.1 | Barley | nucleus | 88.39 | 86.98 |
| GSMUA_Achr1P03660_001 | Banana | nucleus | 78.71 | 83.85 |
| KRH27981 | Soybean | nucleus | 68.06 | 75.63 |
| KRH77464 | Soybean | nucleus | 68.06 | 75.09 |
| VIT_02s0025g04630.t01 | Wine grape | nucleus | 69.68 | 74.23 |
| KRH03996 | Soybean | nucleus | 69.68 | 73.97 |
| KRH57265 | Soybean | nucleus | 69.35 | 73.38 |
| CDX93852 | Canola | nucleus | 52.26 | 72.97 |
| AT1G62990.1 | Thale cress | nucleus | 68.39 | 72.85 |
| Bra036636.1-P | Field mustard | nucleus | 69.03 | 72.79 |
| CDY66559 | Canola | nucleus | 68.71 | 72.45 |
| CDY64892 | Canola | nucleus | 68.71 | 72.45 |
| CDY45968 | Canola | nucleus | 67.74 | 71.67 |
| Bra027006.1-P | Field mustard | nucleus | 67.1 | 70.51 |
| Solyc08g080120.2.1 | Tomato | nucleus | 68.06 | 68.06 |
| PGSC0003DMT400058528 | Potato | nucleus | 68.39 | 67.95 |
| Zm00001d046568_P001 | Maize | nucleus | 57.74 | 56.65 |
| Zm00001d053749_P002 | Maize | nucleus | 55.16 | 53.6 |
| Zm00001d015549_P001 | Maize | nucleus | 56.13 | 53.54 |
| Zm00001d035439_P001 | Maize | nucleus | 25.16 | 26.17 |
| Zm00001d040611_P002 | Maize | nucleus | 24.84 | 26.1 |
| Zm00001d010948_P001 | Maize | nucleus | 25.48 | 25.73 |
| Zm00001d018742_P001 | Maize | nucleus | 25.81 | 22.79 |
| Zm00001d007842_P002 | Maize | nucleus | 26.13 | 22.5 |
| Zm00001d033859_P002 | Maize | nucleus | 25.81 | 22.28 |
| Zm00001d033404_P002 | Maize | nucleus | 25.48 | 21.29 |
| Zm00001d033861_P001 | Maize | nucleus | 23.87 | 20.56 |
| Zm00001d013559_P001 | Maize | cytosol, mitochondrion, nucleus | 8.71 | 16.56 |
| Zm00001d034212_P001 | Maize | nucleus | 24.52 | 15.7 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100284049 | MapMan:15.5.3.4 | UniProt:B6TPJ2 | InterPro:ELK_dom | EMBL:EU966907 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 |
| InterPro:IPR005539 | InterPro:KNOX1 | InterPro:KNOX2 | ProteinID:ONL93139.1 | ProteinID:ONL93140.1 | PFAM:PF03790 |
| PFAM:PF03791 | PFAM:PF05920 | PFscan:PS50071 | PFscan:PS51213 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF74 |
| SMART:SM00389 | SMART:SM01255 | SMART:SM01256 | SUPFAM:SSF46689 | UniParc:UPI000182E329 | EnsemblPlantsGene:Zm00001d027431 |
| EnsemblPlants:Zm00001d027431_P002 | EnsemblPlants:Zm00001d027431_T002 | SEG:seg | : | : | : |
Description
knotted related homeobox1 knotted related homeobox1
Coordinates
chr1:+:5123182..5127784
Molecular Weight (calculated)
34338.8 Da
IEP (calculated)
6.051
GRAVY (calculated)
-0.555
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MQRGGDQAGA SLGMEMGVGY AGGGGGGECS SSSAAAAAAA AAEGEERQLL KGEIAVHPLC EQLVAAHVGC LRVATPIDHL PLIDAQLAQS SGLLHSYAAH
101: HRPFLSPHDK HDLDSFLAQY LMLLCSFREQ LQQHVRVHAV EAVMACREIE QSLQDLTGAT LEEGTGATMS EDEDEAPMLE VGLDMGSDGH DMMGFGPLMP
201: TDSERSLMER VRQELKMELK QGFKSRIEDV REEILRKRRA GKLPGDTTSI LKQWWQEHSK WPYPTEDDKA KLVEETGLQL KQINNWFINQ RKRNWHNNSQ
301: TSTLKSKRKR
101: HRPFLSPHDK HDLDSFLAQY LMLLCSFREQ LQQHVRVHAV EAVMACREIE QSLQDLTGAT LEEGTGATMS EDEDEAPMLE VGLDMGSDGH DMMGFGPLMP
201: TDSERSLMER VRQELKMELK QGFKSRIEDV REEILRKRRA GKLPGDTTSI LKQWWQEHSK WPYPTEDDKA KLVEETGLQL KQINNWFINQ RKRNWHNNSQ
301: TSTLKSKRKR
001: MQEAALGMMG ATVGGDGDTA VVAEQNRQLK GEIATHPMYE QLLAAHVACL RVATPIDQLP IIEAQLSQSH HLLRSYASTA VGYHHDRHEL DNFLAQYVMV
101: LCSFKEQLQQ HVRVHAVEAV MACREIENNL HSLTGATLGE GSGATMSEDE DDLPMDFSSD NSGVDFSGGH DMTGFGPLLP TESERSLMER VRQELKLELK
201: QGFKSRIEDV REEIMRKRRA GKLPGDTTTV LKNWWQQHCK WPYPTEDDKA KLVEETGLQL KQINNWFINQ RKRNWHNNSH SLTSLKSKRK H
101: LCSFKEQLQQ HVRVHAVEAV MACREIENNL HSLTGATLGE GSGATMSEDE DDLPMDFSSD NSGVDFSGGH DMTGFGPLLP TESERSLMER VRQELKLELK
201: QGFKSRIEDV REEIMRKRRA GKLPGDTTTV LKNWWQQHCK WPYPTEDDKA KLVEETGLQL KQINNWFINQ RKRNWHNNSH SLTSLKSKRK H
Arabidopsis Description
KNAT7Homeobox protein knotted-1-like 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPQ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.