Factsheet for Zm00001d027435_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, secretory
MultiLoc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d007842_P002
Zm00001d013559_P001
Zm00001d015549_P001
Zm00001d018742_P001
Zm00001d027431_P002
Zm00001d033404_P002
Zm00001d033859_P002
Zm00001d033861_P001
Zm00001d034212_P001
Zm00001d038714_P001
Zm00001d043470_P001
Zm00001d046568_P001
Zm00001d048471_P001
Zm00001d053749_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G41410.1	Zm00001d027431_P002	AT1G62990.1	11701881
AT5G41410.1	Zm00001d048471_P001	AT1G62990.1	11701881
AT5G41410.1	Zm00001d007842_P002	AT4G08150.1	11701881
AT5G41410.1	Zm00001d013559_P001	AT4G08150.1	11701881
AT5G41410.1	Zm00001d018742_P001	AT4G08150.1	11701881
AT5G41410.1	Zm00001d033404_P002	AT4G08150.1	11701881
AT5G41410.1	Zm00001d033859_P002	AT4G08150.1	11701881
AT5G41410.1	Zm00001d033861_P001	AT4G08150.1	11701881
AT5G41410.1	Zm00001d034212_P001	AT4G08150.1	11701881
AT5G41410.1	Zm00001d007842_P002	AT4G08150.1	15781858
AT5G41410.1	Zm00001d013559_P001	AT4G08150.1	15781858
AT5G41410.1	Zm00001d018742_P001	AT4G08150.1	15781858
AT5G41410.1	Zm00001d033404_P002	AT4G08150.1	15781858
AT5G41410.1	Zm00001d033859_P002	AT4G08150.1	15781858
AT5G41410.1	Zm00001d033861_P001	AT4G08150.1	15781858
AT5G41410.1	Zm00001d034212_P001	AT4G08150.1	15781858
AT5G41410.1	Zm00001d007842_P002	AT4G08150.1	17873098
AT5G41410.1	Zm00001d013559_P001	AT4G08150.1	17873098
AT5G41410.1	Zm00001d018742_P001	AT4G08150.1	17873098
AT5G41410.1	Zm00001d033404_P002	AT4G08150.1	17873098
AT5G41410.1	Zm00001d033859_P002	AT4G08150.1	17873098
AT5G41410.1	Zm00001d033861_P001	AT4G08150.1	17873098
AT5G41410.1	Zm00001d034212_P001	AT4G08150.1	17873098
AT5G41410.1	Zm00001d038714_P001	AT4G18830.1	15781858
AT5G41410.1	Zm00001d043470_P001	AT4G18830.1	15781858
AT5G41410.1	Zm00001d015549_P001	AT4G32040.1	11701881
AT5G41410.1	Zm00001d046568_P001	AT4G32040.1	11701881
AT5G41410.1	Zm00001d053749_P002	AT4G32040.1	11701881
AT5G41410.1	Zm00001d015549_P001	AT4G32040.1	17873098
AT5G41410.1	Zm00001d046568_P001	AT4G32040.1	17873098
AT5G41410.1	Zm00001d053749_P002	AT4G32040.1	17873098
AT5G41410.1	Zm00001d015549_P001	AT5G11060.1	11701881
AT5G41410.1	Zm00001d046568_P001	AT5G11060.1	11701881
AT5G41410.1	Zm00001d053749_P002	AT5G11060.1	11701881
AT5G41410.1	Zm00001d015549_P001	AT5G25220.1	11701881
AT5G41410.1	Zm00001d046568_P001	AT5G25220.1	11701881
AT5G41410.1	Zm00001d053749_P002	AT5G25220.1	11701881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG40303	Sorghum	nucleus	86.94	86.1
Os03t0124000-01	Rice	nucleus	64.52	67.68
TraesCS5A01G514700.1	Wheat	nucleus	64.03	65.62
TraesCS4D01G340700.1	Wheat	nucleus	64.35	65.09
TraesCS4B01G345600.1	Wheat	nucleus	64.03	64.98
HORVU4Hr1G084590.2	Barley	nucleus	64.52	64.31
CDY45383	Canola	nucleus	21.13	49.81
Zm00001d029736_P001	Maize	nucleus, plastid	54.68	49.27
Zm00001d035907_P001	Maize	nucleus	34.84	43.37
GSMUA_Achr1P06400_001	Banana	nucleus	35.65	42.83
GSMUA_Achr2P04310_001	Banana	nucleus	38.23	42.47
VIT_02s0025g00200.t01	Wine grape	nucleus	40.32	38.7
KRH77572	Soybean	nucleus	39.84	38.24
KRH27902	Soybean	nucleus	39.52	38.16
KRH59951	Soybean	nucleus	37.26	36.38
PGSC0003DMT400032122	Potato	nucleus	36.94	36.18
CDY44476	Canola	nucleus	33.06	36.09
KRH41225	Soybean	nucleus	37.58	36.07
Solyc08g081400.2.1	Tomato	nucleus	36.77	35.4
Bra025497.1-P	Field mustard	nucleus	33.71	35.24
AT5G41410.1	Thale cress	nucleus	34.19	34.7
Zm00001d033379_P001	Maize	nucleus	16.29	28.53
Zm00001d027802_P002	Maize	nucleus	26.94	28.45
Zm00001d038355_P001	Maize	nucleus	23.71	25.52
Zm00001d042864_P002	Maize	nucleus	23.55	24.87
Zm00001d033898_P002	Maize	nucleus	30.0	24.64
Zm00001d010060_P001	Maize	nucleus	22.74	24.61
Zm00001d053151_P003	Maize	nucleus	26.61	24.59
Zm00001d013547_P002	Maize	nucleus	24.68	23.94
Zm00001d033378_P003	Maize	nucleus	25.0	23.81
Zm00001d031182_P002	Maize	nucleus	25.48	23.65
Zm00001d046223_P006	Maize	nucleus	15.48	19.55
Zm00001d016298_P001	Maize	nucleus	15.32	17.34
Zm00001d002249_P001	Maize	nucleus	8.06	14.2

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100281788	MapMan:15.5.3.5	UniProt:B6SZ15	EMBL:EU957980	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356	ProteinID:ONL93143.1
ProteinID:ONL93144.1	PFAM:PF05920	PFAM:PF07526	InterPro:POX_dom	PFscan:PS50071	PANTHER:PTHR11850
PANTHER:PTHR11850:SF105	SMART:SM00389	SMART:SM00574	SUPFAM:SSF46689	UniParc:UPI000182C1AF	EnsemblPlantsGene:Zm00001d027435
EnsemblPlants:Zm00001d027435_P001	EnsemblPlants:Zm00001d027435_T001	SEG:seg	:	:	:

Description

Homeobox-transcription factor 30 Homeobox-transcription factor 30

Coordinates

chr1:+:5202748..5208577

Molecular Weight (calculated)

66064.9 Da

IEP (calculated)

6.653

GRAVY (calculated)

-0.486

Length

620 amino acids

Sequence
(BLAST)

001: MAHDPSLGFA DYFSAAAAAG ATAMDDDVGA PELYGLHADD MEFLGMRGLA AMPPAAAHHQ HHHHHGHSKA GALLDDDDAG VGPDVSGSAD DATMRFLSEQ
101: QQQQHQAPLS LSLCRPDVAT TLHEQQHLAG GGSSSRYHQE QQPAAWVQQQ HDYSPSPQQH AWHLRSSRFL VPAQQVLQEF CSLPVDSSSA AASSKRAKAA
201: NKPASQQQQQ QEDGGGAEGS SSSASWAPSP QIQAMDALEL QRLKDKLYIM LEEVDRRYRR YCEQMRALAG GFEAVAGERA AAAYTALASR TISRHFRSLR
301: DGVVAQLQAA RRALGEKDVA VPGMTRGDTP RLRVLDQCIR QHKALTQAAG MMESHPWRPQ RGLPERAVTI LRAWLFEHFL HPYPSDVDKH ILARQTGLSR
401: SQVSNWFINA RVRLWKPMVE EMYVEEMKAE GQDGGGQQQV GVAVANNPNP SSAGHASEAA EDDGRGDSGG GAVVDRKPTR AQLLHDAGSL ASVVNIGGGS
501: RAGFGIMDHL DFDAYGGHHA GAVSLTLGLQ QHDSHADGGA GGVNIAFGAP PPAHHHGYLF APTAAAAGHQ MGGGVHPGLH HHVQFSGAGA GIDGEAAHGQ
601: EHYRGLQGGG GFHLLRDLAG

Best Arabidopsis Sequence Match ( AT5G41410.1 )
(BLAST)

001: MARDQFYGHN NHHHQEQQHQ MINQIQGFDE TNQNPTDHHH YNHQIFGSNS NMGMMIDFSK QQQIRMTSGS DHHHHHHQTS GGTDQNQLLE DSSSAMRLCN
101: VNNDFPSEVN DERPPQRPSQ GLSLSLSSSN PTSISLQSFE LRPQQQQQQG YSGNKSTQHQ NLQHTQMMMM MMNSHHQNNN NNNHQHHNHH QFQIGSSKYL
201: SPAQELLSEF CSLGVKESDE EVMMMKHKKK QKGKQQEEWD TSHHSNNDQH DQSATTSSKK HVPPLHSLEF MELQKRKAKL LSMLEELKRR YGHYREQMRV
301: AAAAFEAAVG LGGAEIYTAL ASRAMSRHFR CLKDGLVGQI QATSQALGER EEDNRAVSIA ARGETPRLRL LDQALRQQKS YRQMTLVDAH PWRPQRGLPE
401: RAVTTLRAWL FEHFLHPYPS DVDKHILARQ TGLSRSQVSN WFINARVRLW KPMIEEMYCE ETRSEQMEIT NPMMIDTKPD PDQLIRVEPE SLSSIVTNPT
501: SKSGHNSTHG TMSLGSTFDF SLYGNQAVTY AGEGGPRGDV SLTLGLQRND GNGGVSLALS PVTAQGGQLF YGRDHIEEGP VQYSASMLDD DQVQNLPYRN
601: LMGAQLLHDI V

Arabidopsis Description

BEL1Homeobox protein BEL1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q38897]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.