Factsheet for Zm00001d029736_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
mitochondrion 2
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d007842_P002
Zm00001d013559_P001
Zm00001d015549_P001
Zm00001d018742_P001
Zm00001d027431_P002
Zm00001d033404_P002
Zm00001d033859_P002
Zm00001d033861_P001
Zm00001d034212_P001
Zm00001d038714_P001
Zm00001d043470_P001
Zm00001d046568_P001
Zm00001d048471_P001
Zm00001d053749_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G41410.1	Zm00001d027431_P002	AT1G62990.1	11701881
AT5G41410.1	Zm00001d048471_P001	AT1G62990.1	11701881
AT5G41410.1	Zm00001d007842_P002	AT4G08150.1	11701881
AT5G41410.1	Zm00001d013559_P001	AT4G08150.1	11701881
AT5G41410.1	Zm00001d018742_P001	AT4G08150.1	11701881
AT5G41410.1	Zm00001d033404_P002	AT4G08150.1	11701881
AT5G41410.1	Zm00001d033859_P002	AT4G08150.1	11701881
AT5G41410.1	Zm00001d033861_P001	AT4G08150.1	11701881
AT5G41410.1	Zm00001d034212_P001	AT4G08150.1	11701881
AT5G41410.1	Zm00001d007842_P002	AT4G08150.1	15781858
AT5G41410.1	Zm00001d013559_P001	AT4G08150.1	15781858
AT5G41410.1	Zm00001d018742_P001	AT4G08150.1	15781858
AT5G41410.1	Zm00001d033404_P002	AT4G08150.1	15781858
AT5G41410.1	Zm00001d033859_P002	AT4G08150.1	15781858
AT5G41410.1	Zm00001d033861_P001	AT4G08150.1	15781858
AT5G41410.1	Zm00001d034212_P001	AT4G08150.1	15781858
AT5G41410.1	Zm00001d007842_P002	AT4G08150.1	17873098
AT5G41410.1	Zm00001d013559_P001	AT4G08150.1	17873098
AT5G41410.1	Zm00001d018742_P001	AT4G08150.1	17873098
AT5G41410.1	Zm00001d033404_P002	AT4G08150.1	17873098
AT5G41410.1	Zm00001d033859_P002	AT4G08150.1	17873098
AT5G41410.1	Zm00001d033861_P001	AT4G08150.1	17873098
AT5G41410.1	Zm00001d034212_P001	AT4G08150.1	17873098
AT5G41410.1	Zm00001d038714_P001	AT4G18830.1	15781858
AT5G41410.1	Zm00001d043470_P001	AT4G18830.1	15781858
AT5G41410.1	Zm00001d015549_P001	AT4G32040.1	11701881
AT5G41410.1	Zm00001d046568_P001	AT4G32040.1	11701881
AT5G41410.1	Zm00001d053749_P002	AT4G32040.1	11701881
AT5G41410.1	Zm00001d015549_P001	AT4G32040.1	17873098
AT5G41410.1	Zm00001d046568_P001	AT4G32040.1	17873098
AT5G41410.1	Zm00001d053749_P002	AT4G32040.1	17873098
AT5G41410.1	Zm00001d015549_P001	AT5G11060.1	11701881
AT5G41410.1	Zm00001d046568_P001	AT5G11060.1	11701881
AT5G41410.1	Zm00001d053749_P002	AT5G11060.1	11701881
AT5G41410.1	Zm00001d015549_P001	AT5G25220.1	11701881
AT5G41410.1	Zm00001d046568_P001	AT5G25220.1	11701881
AT5G41410.1	Zm00001d053749_P002	AT5G25220.1	11701881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92018	Sorghum	nucleus	71.08	77.13
TraesCS1B01G191800.1	Wheat	nucleus	52.03	61.2
TraesCS1A01G183400.1	Wheat	nucleus	52.03	61.09
TraesCS1D01G193800.1	Wheat	nucleus	51.89	60.61
HORVU1Hr1G049760.1	Barley	nucleus	51.6	59.56
Os10t0534900-01	Rice	nucleus	49.13	57.68
Zm00001d027435_P001	Maize	nucleus	49.27	54.68
CDY45383	Canola	nucleus	17.88	46.77
GSMUA_Achr1P06400_001	Banana	nucleus	30.81	41.09
Zm00001d035907_P001	Maize	nucleus	29.07	40.16
GSMUA_Achr2P04310_001	Banana	nucleus	31.83	39.25
VIT_02s0025g00200.t01	Wine grape	nucleus	33.14	35.29
KRH27902	Soybean	nucleus	32.12	34.42
KRH77572	Soybean	nucleus	31.98	34.06
CDY44476	Canola	nucleus	28.05	33.98
KRH41225	Soybean	nucleus	31.69	33.75
KRH59951	Soybean	nucleus	30.67	33.23
Bra025497.1-P	Field mustard	nucleus	28.05	32.55
PGSC0003DMT400032122	Potato	nucleus	29.94	32.54
Solyc08g081400.2.1	Tomato	nucleus	30.38	32.45
AT5G41410.1	Thale cress	nucleus	28.05	31.59
Zm00001d033379_P001	Maize	nucleus	15.12	29.38
Zm00001d027802_P002	Maize	nucleus	23.11	27.09
Zm00001d033898_P002	Maize	nucleus	29.36	26.75
Zm00001d038355_P001	Maize	nucleus	21.37	25.52
Zm00001d042864_P002	Maize	nucleus	21.37	25.04
Zm00001d053151_P003	Maize	nucleus	24.42	25.04
Zm00001d013547_P002	Maize	nucleus	22.67	24.41
Zm00001d033378_P003	Maize	nucleus	22.82	24.12
Zm00001d031182_P002	Maize	nucleus	23.26	23.95
Zm00001d010060_P001	Maize	nucleus	19.91	23.91
Zm00001d046223_P006	Maize	nucleus	13.81	19.35
Zm00001d016298_P001	Maize	nucleus	14.24	17.88
Zm00001d002249_P001	Maize	nucleus	7.85	15.34

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.5	UniProt:A0A1D6K7I1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356	ProteinID:ONL99512.1	PFAM:PF05920
PFAM:PF07526	InterPro:POX_dom	PFscan:PS50071	PANTHER:PTHR11850	PANTHER:PTHR11850:SF96	SMART:SM00389
SMART:SM00574	SUPFAM:SSF46689	UniParc:UPI000845319A	EnsemblPlantsGene:Zm00001d029736	EnsemblPlants:Zm00001d029736_P001	EnsemblPlants:Zm00001d029736_T001
SEG:seg	:	:	:	:	:

Description

Homeobox-transcription factor 100Bell-like homeodomain protein 3

Coordinates

chr1:-:84581725..84587077

Molecular Weight (calculated)

73346.5 Da

IEP (calculated)

8.030

GRAVY (calculated)

-0.367

Length

688 amino acids

Sequence
(BLAST)

001: MSECWHWRCL SAYHPSPARK AMALSSPPSP WRKVRHPASR RARWAACGYT YVVIPLSRLA RPGRPGLPAT TTTHRHMAHD EPGFAYADYF AAAAGAVATF
101: VPEVDVGGGG EEGLHLYGLQ PHHQQPGVEM YGARGHMPPA AMMAAHGGKA ALGLDVASPV VGGHFGDDHL RQALQAPLSL SLHDDGTADA APLALHHHHH
201: HLGGVPQAQQ HQPPGAWPQP QQQGAWHLRG SRFLRPTQQL LQEFCTLPVD TVTSTPAKPA SVEDGVGSSS SAAAPSQQII QAMDAAELQR LKAKLYAMLQ
301: EVERRYRRYR EQMRAVAGSF EAVAGERAAA AYTRLAQRTI SRHFRSVRDG VAAQMQAVRR ALGEKDADDG GVVPAAAGMM ANKGETTPRL RVIDQCLRQH
401: RAYQTGVVLE SQPWRPQRGL PERAVSILRA WMFEHFLHPY PSDVDKHILA RQTGLSRSQV SNWFINARVR LWKPMVEEMY SEEMKDPKEG ACSNANSSVN
501: TGAGYASEEL GQPLGHGGAC GGVDEQKPTR AQLVHDAGSL ASAVSIGSSR DQQQISSINF RMMDHLDFDA YSGDPAAAGG PAAGFGGAGA SGGVSLTLGL
601: QQHADGDPHG GVNIAFAAAP SAAHEFLFMA GGGEHRMVAA GAVHPSSSHG HGQFAASMQG DSAGVASSHY HRGLGAATGF QLLHDLAG

Best Arabidopsis Sequence Match ( AT2G23760.1 )
(BLAST)

001: MGLATTTSSM SQDYHHHQGI FSFSNGFHRS SSTTHQEEVD ESAVVSGAQI PVYETAGMLS EMFAYPGGGG GGSGGEILDQ STKQLLEQQN RHNNNNNSTL
101: HMLLPNHHQG FAFTDENTMQ PQQQQHFTWP SSSSDHHQNR DMIGTVHVEG GKGLSLSLSS SLAAAKAEEY RSIYCAAVDG TSSSSNASAH HHQFNQFKNL
201: LLENSSSQHH HHQVVGHFGS SSSSPMAASS SIGGIYTLRN SKYTKPAQEL LEEFCSVGRG HFKKNKLSRN NSNPNTTGGG GGGGSSSSAG TANDSPPLSP
301: ADRIEHQRRK VKLLSMLEEV DRRYNHYCEQ MQMVVNSFDQ VMGYGAAVPY TTLAQKAMSR HFRCLKDAVA VQLKRSCELL GDKEAAGAAS SGLTKGETPR
401: LRLLEQSLRQ QRAFHHMGMM EQEAWRPQRG LPERSVNILR AWLFEHFLNP YPSDADKHLL ARQTGLSRNQ VSNWFINARV RLWKPMVEEM YQQEAKEREE
501: AEEENENQQQ QRRQQQTNNN DTKPNNNENN FTVITAQTPT TMTSTHHEND SSFLSSVAAA SHGGSDAFTV ATCQQDVSDF HVDGDGVNVI RFGTKQTGDV
601: SLTLGLRHSG NIPDKNTSFS VRDFGDF

Arabidopsis Description

BLH4BEL1-like homeodomain 4 [Source:TAIR;Acc:AT2G23760]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.