Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G191800.1 | Wheat | nucleus | 96.77 | 97.44 |
| TraesCS1A01G183400.1 | Wheat | nucleus | 95.93 | 96.42 |
| HORVU1Hr1G049760.1 | Barley | nucleus | 94.57 | 93.46 |
| Os10t0534900-01 | Rice | nucleus | 61.46 | 61.77 |
| EER92018 | Sorghum | nucleus | 60.78 | 56.47 |
| TraesCS4D01G340700.1 | Wheat | nucleus | 55.18 | 53.02 |
| Zm00001d029736_P001 | Maize | nucleus, plastid | 60.61 | 51.89 |
| CDY45383 | Canola | nucleus | 21.39 | 47.91 |
| GSMUA_Achr1P06400_001 | Banana | nucleus | 36.16 | 41.28 |
| GSMUA_Achr2P04310_001 | Banana | nucleus | 37.52 | 39.61 |
| TraesCS7D01G019800.1 | Wheat | nucleus | 31.07 | 37.89 |
| VIT_02s0025g00200.t01 | Wine grape | nucleus | 41.43 | 37.77 |
| PGSC0003DMT400032122 | Potato | nucleus | 39.56 | 36.81 |
| KRH77572 | Soybean | nucleus | 39.73 | 36.22 |
| KRH27902 | Soybean | nucleus | 39.39 | 36.14 |
| KRH59951 | Soybean | nucleus | 38.71 | 35.91 |
| Solyc08g081400.2.1 | Tomato | nucleus | 39.22 | 35.87 |
| KRH41225 | Soybean | nucleus | 39.22 | 35.76 |
| CDY44476 | Canola | nucleus | 33.96 | 35.21 |
| Bra025497.1-P | Field mustard | nucleus | 34.63 | 34.4 |
| AT5G41410.1 | Thale cress | nucleus | 34.63 | 33.39 |
| TraesCS1D01G280300.1 | Wheat | nucleus | 27.16 | 27.92 |
| TraesCS4D01G279300.1 | Wheat | nucleus | 26.83 | 26.92 |
| TraesCS4D01G022500.1 | Wheat | nucleus | 16.81 | 26.54 |
| TraesCS4D01G111900.1 | Wheat | nucleus | 28.86 | 25.6 |
| TraesCS3D01G357400.1 | Wheat | nucleus | 26.99 | 25.52 |
| TraesCS4D01G022600.1 | Wheat | nucleus | 27.33 | 25.24 |
| TraesCS5D01G013300.1 | Wheat | nucleus | 26.66 | 24.15 |
| TraesCS4D01G062100.1 | Wheat | nucleus | 31.24 | 22.91 |
| TraesCS7D01G364500.1 | Wheat | nucleus | 16.98 | 18.18 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.5 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF05920 |
| PFAM:PF07526 | InterPro:POX_dom | PFscan:PS50071 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF96 | SMART:SM00389 |
| SMART:SM00574 | SUPFAM:SSF46689 | EnsemblPlantsGene:TraesCS1D01G193800 | EnsemblPlants:TraesCS1D01G193800.1 | TIGR:cd00086 | SEG:seg |
Description
No Description!
Coordinates
chr1D:-:269725855..269729983
Molecular Weight (calculated)
63051.6 Da
IEP (calculated)
7.160
GRAVY (calculated)
-0.515
Length
589 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHDPSLVGY ADYFAATGSN GGGVTLVPEV DARAEHQMYG GGGLHHHHHS GADMFGARAF GMAPAGEATS AQSKAALDVD VDGSSTISFF RGEQHHHHQQ
101: QLQMGQAPLS LSLHGPPDAG SSSFMLHHHL GGGEPRLQQH QQTAPGAWQV QGAGSGWQLR GSRFLLPTQQ LLQEFCSIPA DTDSKAPKKP AQEEHGSSSS
201: ASWPPSSTQI QSMDAAELQK LKAKLYTMIE EVDRRYRRYR EQMRAVAASF EAVAGQRAAA VYTRMASRTI SKHFRSVRDG VAAQVRAVRG ALGEKDAGAA
301: VPGMTRGETP RLRALDQCLR QHKAYQSGML ESHPWRPQRG LPERAVSVLR AWLFEHFLHP YPSDVDKHIL ARQTGLSRSQ VSNWFINARV RLWKPMVEEM
401: YAEEMKDKEE GSGGDGGGQS AQQAGDLANP NPVAGSYASE GRGEQKPTRA QLHQLHDAGS LASVVSIGQS TDPQGLNFGM MDQLDFEAYE AATAGFGNGV
501: SLTLGLQHQQ QQHQHQHHGG VNVAAFAAAS PSSSSAAHGG AAEFLFMAGE GVHPSANGQF GAGMGSGADV ASQYHRGLGG FHLLRDLAG
101: QLQMGQAPLS LSLHGPPDAG SSSFMLHHHL GGGEPRLQQH QQTAPGAWQV QGAGSGWQLR GSRFLLPTQQ LLQEFCSIPA DTDSKAPKKP AQEEHGSSSS
201: ASWPPSSTQI QSMDAAELQK LKAKLYTMIE EVDRRYRRYR EQMRAVAASF EAVAGQRAAA VYTRMASRTI SKHFRSVRDG VAAQVRAVRG ALGEKDAGAA
301: VPGMTRGETP RLRALDQCLR QHKAYQSGML ESHPWRPQRG LPERAVSVLR AWLFEHFLHP YPSDVDKHIL ARQTGLSRSQ VSNWFINARV RLWKPMVEEM
401: YAEEMKDKEE GSGGDGGGQS AQQAGDLANP NPVAGSYASE GRGEQKPTRA QLHQLHDAGS LASVVSIGQS TDPQGLNFGM MDQLDFEAYE AATAGFGNGV
501: SLTLGLQHQQ QQHQHQHHGG VNVAAFAAAS PSSSSAAHGG AAEFLFMAGE GVHPSANGQF GAGMGSGADV ASQYHRGLGG FHLLRDLAG
001: MGLATTTSSM SQDYHHHQGI FSFSNGFHRS SSTTHQEEVD ESAVVSGAQI PVYETAGMLS EMFAYPGGGG GGSGGEILDQ STKQLLEQQN RHNNNNNSTL
101: HMLLPNHHQG FAFTDENTMQ PQQQQHFTWP SSSSDHHQNR DMIGTVHVEG GKGLSLSLSS SLAAAKAEEY RSIYCAAVDG TSSSSNASAH HHQFNQFKNL
201: LLENSSSQHH HHQVVGHFGS SSSSPMAASS SIGGIYTLRN SKYTKPAQEL LEEFCSVGRG HFKKNKLSRN NSNPNTTGGG GGGGSSSSAG TANDSPPLSP
301: ADRIEHQRRK VKLLSMLEEV DRRYNHYCEQ MQMVVNSFDQ VMGYGAAVPY TTLAQKAMSR HFRCLKDAVA VQLKRSCELL GDKEAAGAAS SGLTKGETPR
401: LRLLEQSLRQ QRAFHHMGMM EQEAWRPQRG LPERSVNILR AWLFEHFLNP YPSDADKHLL ARQTGLSRNQ VSNWFINARV RLWKPMVEEM YQQEAKEREE
501: AEEENENQQQ QRRQQQTNNN DTKPNNNENN FTVITAQTPT TMTSTHHEND SSFLSSVAAA SHGGSDAFTV ATCQQDVSDF HVDGDGVNVI RFGTKQTGDV
601: SLTLGLRHSG NIPDKNTSFS VRDFGDF
101: HMLLPNHHQG FAFTDENTMQ PQQQQHFTWP SSSSDHHQNR DMIGTVHVEG GKGLSLSLSS SLAAAKAEEY RSIYCAAVDG TSSSSNASAH HHQFNQFKNL
201: LLENSSSQHH HHQVVGHFGS SSSSPMAASS SIGGIYTLRN SKYTKPAQEL LEEFCSVGRG HFKKNKLSRN NSNPNTTGGG GGGGSSSSAG TANDSPPLSP
301: ADRIEHQRRK VKLLSMLEEV DRRYNHYCEQ MQMVVNSFDQ VMGYGAAVPY TTLAQKAMSR HFRCLKDAVA VQLKRSCELL GDKEAAGAAS SGLTKGETPR
401: LRLLEQSLRQ QRAFHHMGMM EQEAWRPQRG LPERSVNILR AWLFEHFLNP YPSDADKHLL ARQTGLSRNQ VSNWFINARV RLWKPMVEEM YQQEAKEREE
501: AEEENENQQQ QRRQQQTNNN DTKPNNNENN FTVITAQTPT TMTSTHHEND SSFLSSVAAA SHGGSDAFTV ATCQQDVSDF HVDGDGVNVI RFGTKQTGDV
601: SLTLGLRHSG NIPDKNTSFS VRDFGDF
Arabidopsis Description
BLH4BEL1-like homeodomain 4 [Source:TAIR;Acc:AT2G23760]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.