Skip to main content
crop-pal logo
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • mitochondrion 2
  • nucleus 3
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4A01G289500.1 Wheat nucleus 91.69 91.94
TraesCS4B01G025400.1 Wheat nucleus 90.88 90.88
HORVU4Hr1G003750.1 Barley nucleus 76.94 83.92
KXG37846 Sorghum nucleus 51.47 53.93
Os03t0680700-00 Rice nucleus 48.53 52.31
Zm00001d033379_P001 Maize nucleus 49.6 52.26
CDX73171 Canola nucleus 26.01 33.56
AT1G75430.1 Thale cress nucleus 26.01 33.45
CDY47523 Canola nucleus 25.74 33.22
Bra015844.1-P Field mustard nucleus 25.47 32.87
KRH61118 Soybean nucleus 31.1 26.36
GSMUA_Achr5P03130_001 Banana cytosol 23.59 26.35
KRH51793 Soybean nucleus 30.83 25.73
VIT_18s0001g13130.t01 Wine grape nucleus 31.64 25.11
Solyc04g080780.2.1 Tomato nucleus 26.81 25.0
PGSC0003DMT400009609 Potato nucleus 27.35 24.11
TraesCS4D01G279300.1 Wheat nucleus 31.37 19.93
TraesCS7D01G019800.1 Wheat nucleus 25.74 19.88
TraesCS4D01G111900.1 Wheat nucleus 32.17 18.07
TraesCS4D01G022600.1 Wheat nucleus 30.29 17.71
TraesCS5D01G013300.1 Wheat nucleus 29.49 16.92
TraesCS1D01G193800.1 Wheat nucleus 26.54 16.81
TraesCS1D01G280300.1 Wheat nucleus 25.47 16.58
TraesCS4D01G340700.1 Wheat nucleus 27.08 16.48
TraesCS7D01G364500.1 Wheat nucleus 22.52 15.27
TraesCS3D01G357400.1 Wheat nucleus 24.66 14.77
TraesCS4D01G062100.1 Wheat nucleus 28.42 13.2
Protein Annotations
Gene3D:1.10.10.60MapMan:15.5.3.5GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488
GO:GO:0006139GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
InterPro:Homeobox-like_sfInterPro:Homeobox_KN_domainInterPro:Homeobox_domInterPro:IPR001356PFAM:PF05920PFAM:PF07526
InterPro:POX_domPFscan:PS50071PANTHER:PTHR11850PANTHER:PTHR11850:SF128SMART:SM00389SMART:SM00574
SUPFAM:SSF46689EnsemblPlantsGene:TraesCS4D01G022500EnsemblPlants:TraesCS4D01G022500.1TIGR:cd00086SEG:seg:
Description
No Description!
Coordinates
chr4D:-:9443778..9445575
Molecular Weight (calculated)
40534.6 Da
IEP (calculated)
5.225
GRAVY (calculated)
-0.467
Length
373 amino acids
Sequence
(BLAST)
001: MVTKRLQESG SPKQARPVAT DSANGPLMLL RLREHCCREH HPAASPAGPL ALTLGAPAAT ADDVCRRCCC ARDEDADAPA LAPGVMPSVD SVLRGSRYLR
101: PVQELLRDAV SAVVGGDDDD ESAGGGSEDE AAGEQALREI RLRAAATRRR GIQARSDGGA GAVHAKLLGL LSELEGRQEH YFQELSRVAS SFEPALGPAA
201: TAGYTSLMSR AMTRHFGNLR RAILRKLAAV ITRPAPAPRA TLWANDDSEE EEEDEDDDEY DPAQTEDVVS RLVRRTKQAA AARAAEQVCK PLRGLPEGSV
301: AVLRAWLFNH FLDPYPSDSE KLRLAVSTGL TRRQISNWFI NARVRLWKPM VEEMYADEFS DVSSRDDDAA PSQ
Best Arabidopsis Sequence Match ( AT1G75430.1 )
(BLAST)
001: MEDFRVRHEC SSLRGTLLDS RYAKAVQCLV EEVIDIGGRE VELCNNILIN QLFPGRRRPG FALSSEIKSE LCSSGFMSLP ENHEIHIKIT KLLSLLQQVE
101: ERFEQYCNQL EQVISSFEEI AGEGSSKVYT GLALQAMTRH FGSLEEAIIS QLNSVRRRFI ISHQDVPKII SSGLSQLSLF DGNTTSSSLQ RLGLVQGPQR
201: HAWKPIRGLP ETSVAILRAW LFQHFLHPYP NEAEKLVLAS QTGLSKNQVS NWFINARVRL WKPMIEEMYR EEFGDSLDES MQREANDDSN
Arabidopsis Description
BLH11Uncharacterized protein At1g75430 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV32]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.