Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 3
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS4A01G289500.1 | Wheat | nucleus | 91.69 | 91.94 |
TraesCS4B01G025400.1 | Wheat | nucleus | 90.88 | 90.88 |
HORVU4Hr1G003750.1 | Barley | nucleus | 76.94 | 83.92 |
KXG37846 | Sorghum | nucleus | 51.47 | 53.93 |
Os03t0680700-00 | Rice | nucleus | 48.53 | 52.31 |
Zm00001d033379_P001 | Maize | nucleus | 49.6 | 52.26 |
CDX73171 | Canola | nucleus | 26.01 | 33.56 |
AT1G75430.1 | Thale cress | nucleus | 26.01 | 33.45 |
CDY47523 | Canola | nucleus | 25.74 | 33.22 |
Bra015844.1-P | Field mustard | nucleus | 25.47 | 32.87 |
KRH61118 | Soybean | nucleus | 31.1 | 26.36 |
GSMUA_Achr5P03130_001 | Banana | cytosol | 23.59 | 26.35 |
KRH51793 | Soybean | nucleus | 30.83 | 25.73 |
VIT_18s0001g13130.t01 | Wine grape | nucleus | 31.64 | 25.11 |
Solyc04g080780.2.1 | Tomato | nucleus | 26.81 | 25.0 |
PGSC0003DMT400009609 | Potato | nucleus | 27.35 | 24.11 |
TraesCS4D01G279300.1 | Wheat | nucleus | 31.37 | 19.93 |
TraesCS7D01G019800.1 | Wheat | nucleus | 25.74 | 19.88 |
TraesCS4D01G111900.1 | Wheat | nucleus | 32.17 | 18.07 |
TraesCS4D01G022600.1 | Wheat | nucleus | 30.29 | 17.71 |
TraesCS5D01G013300.1 | Wheat | nucleus | 29.49 | 16.92 |
TraesCS1D01G193800.1 | Wheat | nucleus | 26.54 | 16.81 |
TraesCS1D01G280300.1 | Wheat | nucleus | 25.47 | 16.58 |
TraesCS4D01G340700.1 | Wheat | nucleus | 27.08 | 16.48 |
TraesCS7D01G364500.1 | Wheat | nucleus | 22.52 | 15.27 |
TraesCS3D01G357400.1 | Wheat | nucleus | 24.66 | 14.77 |
TraesCS4D01G062100.1 | Wheat | nucleus | 28.42 | 13.2 |
Protein Annotations
Gene3D:1.10.10.60 | MapMan:15.5.3.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF05920 | PFAM:PF07526 |
InterPro:POX_dom | PFscan:PS50071 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF128 | SMART:SM00389 | SMART:SM00574 |
SUPFAM:SSF46689 | EnsemblPlantsGene:TraesCS4D01G022500 | EnsemblPlants:TraesCS4D01G022500.1 | TIGR:cd00086 | SEG:seg | : |
Description
No Description!
Coordinates
chr4D:-:9443778..9445575
Molecular Weight (calculated)
40534.6 Da
IEP (calculated)
5.225
GRAVY (calculated)
-0.467
Length
373 amino acids
Sequence
(BLAST)
(BLAST)
001: MVTKRLQESG SPKQARPVAT DSANGPLMLL RLREHCCREH HPAASPAGPL ALTLGAPAAT ADDVCRRCCC ARDEDADAPA LAPGVMPSVD SVLRGSRYLR
101: PVQELLRDAV SAVVGGDDDD ESAGGGSEDE AAGEQALREI RLRAAATRRR GIQARSDGGA GAVHAKLLGL LSELEGRQEH YFQELSRVAS SFEPALGPAA
201: TAGYTSLMSR AMTRHFGNLR RAILRKLAAV ITRPAPAPRA TLWANDDSEE EEEDEDDDEY DPAQTEDVVS RLVRRTKQAA AARAAEQVCK PLRGLPEGSV
301: AVLRAWLFNH FLDPYPSDSE KLRLAVSTGL TRRQISNWFI NARVRLWKPM VEEMYADEFS DVSSRDDDAA PSQ
101: PVQELLRDAV SAVVGGDDDD ESAGGGSEDE AAGEQALREI RLRAAATRRR GIQARSDGGA GAVHAKLLGL LSELEGRQEH YFQELSRVAS SFEPALGPAA
201: TAGYTSLMSR AMTRHFGNLR RAILRKLAAV ITRPAPAPRA TLWANDDSEE EEEDEDDDEY DPAQTEDVVS RLVRRTKQAA AARAAEQVCK PLRGLPEGSV
301: AVLRAWLFNH FLDPYPSDSE KLRLAVSTGL TRRQISNWFI NARVRLWKPM VEEMYADEFS DVSSRDDDAA PSQ
001: MEDFRVRHEC SSLRGTLLDS RYAKAVQCLV EEVIDIGGRE VELCNNILIN QLFPGRRRPG FALSSEIKSE LCSSGFMSLP ENHEIHIKIT KLLSLLQQVE
101: ERFEQYCNQL EQVISSFEEI AGEGSSKVYT GLALQAMTRH FGSLEEAIIS QLNSVRRRFI ISHQDVPKII SSGLSQLSLF DGNTTSSSLQ RLGLVQGPQR
201: HAWKPIRGLP ETSVAILRAW LFQHFLHPYP NEAEKLVLAS QTGLSKNQVS NWFINARVRL WKPMIEEMYR EEFGDSLDES MQREANDDSN
101: ERFEQYCNQL EQVISSFEEI AGEGSSKVYT GLALQAMTRH FGSLEEAIIS QLNSVRRRFI ISHQDVPKII SSGLSQLSLF DGNTTSSSLQ RLGLVQGPQR
201: HAWKPIRGLP ETSVAILRAW LFQHFLHPYP NEAEKLVLAS QTGLSKNQVS NWFINARVRL WKPMIEEMYR EEFGDSLDES MQREANDDSN
Arabidopsis Description
BLH11Uncharacterized protein At1g75430 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV32]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.