Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47523 | Canola | nucleus | 99.31 | 99.31 |
| Bra015844.1-P | Field mustard | nucleus | 98.62 | 98.62 |
| AT1G75430.1 | Thale cress | nucleus | 85.47 | 85.17 |
| GSMUA_Achr5P03140_001 | Banana | nucleus | 15.92 | 59.74 |
| CDX83753 | Canola | nucleus | 27.34 | 41.58 |
| KRH61118 | Soybean | nucleus | 56.75 | 37.27 |
| KRH51793 | Soybean | nucleus | 56.75 | 36.69 |
| VIT_18s0001g13130.t01 | Wine grape | nucleus | 57.09 | 35.11 |
| CDX75307 | Canola | nucleus | 25.95 | 33.78 |
| Solyc04g080780.2.1 | Tomato | nucleus | 46.02 | 33.25 |
| PGSC0003DMT400009609 | Potato | nucleus | 46.37 | 31.68 |
| HORVU4Hr1G003750.1 | Barley | nucleus | 34.6 | 29.24 |
| CDY29411 | Canola | nucleus | 38.41 | 28.53 |
| Zm00001d033379_P001 | Maize | nucleus | 34.95 | 28.53 |
| Os03t0680700-00 | Rice | nucleus | 33.91 | 28.32 |
| CDY46209 | Canola | nucleus | 37.02 | 28.31 |
| KXG37846 | Sorghum | nucleus | 33.91 | 27.53 |
| CDY21826 | Canola | extracellular, plastid | 9.0 | 27.08 |
| CDY02261 | Canola | nucleus | 41.52 | 26.73 |
| TraesCS4A01G289500.1 | Wheat | nucleus | 34.26 | 26.61 |
| CDX89711 | Canola | nucleus | 41.52 | 26.37 |
| TraesCS4B01G025400.1 | Wheat | nucleus | 33.91 | 26.27 |
| TraesCS4D01G022500.1 | Wheat | nucleus | 33.56 | 26.01 |
| CDY45383 | Canola | nucleus | 23.18 | 25.48 |
| CDY52073 | Canola | nucleus | 40.14 | 24.63 |
| CDY39031 | Canola | nucleus | 40.48 | 24.48 |
| CDX68129 | Canola | nucleus | 39.45 | 24.1 |
| CDY63699 | Canola | nucleus | 34.26 | 23.68 |
| CDX73170 | Canola | nucleus | 40.83 | 22.96 |
| CDY47524 | Canola | nucleus | 40.83 | 22.87 |
| CDX96653 | Canola | nucleus | 39.45 | 22.53 |
| CDX85896 | Canola | nucleus | 39.1 | 22.47 |
| CDX71279 | Canola | nucleus | 28.72 | 21.39 |
| CDY39359 | Canola | nucleus | 37.72 | 21.0 |
| CDY30566 | Canola | nucleus | 31.83 | 20.54 |
| CDX77099 | Canola | nucleus | 31.83 | 20.49 |
| CDY13511 | Canola | nucleus | 27.68 | 18.31 |
| CDY40420 | Canola | nucleus | 39.45 | 18.04 |
| CDX68927 | Canola | nucleus | 28.72 | 18.0 |
| CDX76849 | Canola | nucleus | 37.37 | 17.97 |
| CDY46061 | Canola | nucleus | 37.72 | 17.93 |
| CDY32069 | Canola | nucleus | 39.45 | 17.92 |
| CDX75313 | Canola | nucleus | 28.72 | 17.81 |
| CDX72383 | Canola | nucleus | 27.34 | 17.48 |
| CDY44476 | Canola | nucleus | 33.91 | 17.25 |
| CDX68925 | Canola | cytosol | 10.73 | 17.13 |
| CDY45321 | Canola | nucleus, plastid | 40.48 | 17.08 |
| CDX84585 | Canola | nucleus | 39.1 | 16.84 |
| CDX84171 | Canola | nucleus | 34.26 | 16.84 |
| CDY39669 | Canola | nucleus | 37.37 | 16.74 |
| CDX75085 | Canola | nucleus | 36.33 | 16.72 |
| CDY62523 | Canola | nucleus | 37.37 | 16.67 |
| CDY10473 | Canola | nucleus | 32.87 | 16.52 |
| CDY40327 | Canola | nucleus | 32.87 | 16.44 |
| CDX79646 | Canola | nucleus | 39.1 | 16.35 |
| CDY24765 | Canola | nucleus | 37.37 | 16.19 |
| CDX69252 | Canola | nucleus | 37.02 | 16.04 |
| CDX75604 | Canola | nucleus | 37.02 | 15.99 |
| CDY22463 | Canola | nucleus | 37.02 | 15.97 |
| CDY69132 | Canola | nucleus | 30.8 | 15.51 |
| CDY48107 | Canola | nucleus | 30.45 | 15.3 |
| CDY55113 | Canola | nucleus | 25.26 | 13.96 |
| CDX80798 | Canola | nucleus | 24.91 | 13.53 |
| CDX68906 | Canola | nucleus | 5.88 | 6.56 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.5 | GO:A0A078C7X8 | EnsemblPlants:CDX73171 | ProteinID:CDX73171 | ProteinID:CDX73171.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00103659001 | InterPro:Homeobox-like_sf |
| InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF05920 | PFAM:PF07526 | InterPro:POX_dom |
| PFscan:PS50071 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF132 | SMART:SM00389 | SMART:SM00574 | SUPFAM:SSF46689 |
| UniParc:UPI0004EC8CDC | : | : | : | : | : |
Description
BnaC06g36190D
Coordinates
chrLK031797:-:2451450..2453456
Molecular Weight (calculated)
32983.4 Da
IEP (calculated)
6.315
GRAVY (calculated)
-0.347
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEFRVRHEF SSTTSVSLDS RYVKAARCLL EEVIDMGGRQ VDLCNDVLIQ QLFPGRRRPG FGLSSEIKSE LCNSGFMSLP ENHELHIKIT KLLSLLQQVD
101: ERFDIYCNQL EQVISSFEEV AGEGASKLYT GLALQAMTRH FGSLQEAILS QLNSLRRRFI ISQDFVPKIV TSGLSQLSLF DGNTPSSLQR LGWVQGPQRH
201: AWKPIRGLPE TSVAILRAWL FHHFLHPYPS DAEKLMLASQ TGLSKNQVSN WFINARVRLW KPMIEEMYRE EFGDSSDESM QREGNDDSN
101: ERFDIYCNQL EQVISSFEEV AGEGASKLYT GLALQAMTRH FGSLQEAILS QLNSLRRRFI ISQDFVPKIV TSGLSQLSLF DGNTPSSLQR LGWVQGPQRH
201: AWKPIRGLPE TSVAILRAWL FHHFLHPYPS DAEKLMLASQ TGLSKNQVSN WFINARVRLW KPMIEEMYRE EFGDSSDESM QREGNDDSN
001: MEDFRVRHEC SSLRGTLLDS RYAKAVQCLV EEVIDIGGRE VELCNNILIN QLFPGRRRPG FALSSEIKSE LCSSGFMSLP ENHEIHIKIT KLLSLLQQVE
101: ERFEQYCNQL EQVISSFEEI AGEGSSKVYT GLALQAMTRH FGSLEEAIIS QLNSVRRRFI ISHQDVPKII SSGLSQLSLF DGNTTSSSLQ RLGLVQGPQR
201: HAWKPIRGLP ETSVAILRAW LFQHFLHPYP NEAEKLVLAS QTGLSKNQVS NWFINARVRL WKPMIEEMYR EEFGDSLDES MQREANDDSN
101: ERFEQYCNQL EQVISSFEEI AGEGSSKVYT GLALQAMTRH FGSLEEAIIS QLNSVRRRFI ISHQDVPKII SSGLSQLSLF DGNTTSSSLQ RLGLVQGPQR
201: HAWKPIRGLP ETSVAILRAW LFQHFLHPYP NEAEKLVLAS QTGLSKNQVS NWFINARVRL WKPMIEEMYR EEFGDSLDES MQREANDDSN
Arabidopsis Description
BLH11Uncharacterized protein At1g75430 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV32]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.