Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46061 | Canola | nucleus | 96.34 | 95.23 |
| CDY62523 | Canola | nucleus | 91.35 | 84.72 |
| CDY39669 | Canola | nucleus | 90.68 | 84.5 |
| AT2G23760.4 | Thale cress | nucleus | 87.52 | 77.47 |
| CDX75604 | Canola | nucleus | 68.72 | 61.73 |
| CDX69252 | Canola | nucleus | 68.39 | 61.62 |
| CDY22463 | Canola | nucleus | 64.56 | 57.91 |
| GSMUA_Achr5P08840_001 | Banana | nucleus | 30.45 | 57.73 |
| GSMUA_Achr4P14670_001 | Banana | nucleus | 27.95 | 56.57 |
| GSMUA_Achr4P07450_001 | Banana | nucleus | 28.45 | 56.44 |
| CDY24765 | Canola | nucleus | 62.56 | 56.37 |
| GSMUA_Achr1P26900_001 | Banana | nucleus | 35.94 | 54.27 |
| CDX83753 | Canola | nucleus | 15.64 | 49.47 |
| KRH28575 | Soybean | nucleus | 55.57 | 47.38 |
| KRH76894 | Soybean | nucleus | 55.74 | 47.18 |
| KRH69971 | Soybean | nucleus | 50.75 | 45.25 |
| Solyc02g089940.2.1 | Tomato | nucleus | 52.75 | 43.66 |
| PGSC0003DMT400026172 | Potato | nucleus | 53.41 | 43.5 |
| KRH08329 | Soybean | nucleus | 55.41 | 42.86 |
| CDY45383 | Canola | nucleus | 18.3 | 41.83 |
| VIT_04s0023g01020.t01 | Wine grape | nucleus | 58.07 | 41.25 |
| GSMUA_Achr7P27440_001 | Banana | nucleus | 45.26 | 39.77 |
| CDY21826 | Canola | extracellular, plastid | 6.32 | 39.58 |
| CDX73171 | Canola | nucleus | 17.97 | 37.37 |
| CDY47523 | Canola | nucleus | 17.8 | 37.02 |
| TraesCS4B01G063100.1 | Wheat | nucleus, plastid | 45.42 | 36.84 |
| Zm00001d033898_P002 | Maize | nucleus | 46.09 | 36.69 |
| EER93512 | Sorghum | nucleus, plastid | 46.92 | 36.62 |
| TraesCS4A01G252100.2 | Wheat | nucleus | 45.92 | 35.8 |
| Os03t0732100-01 | Rice | nucleus | 46.59 | 35.44 |
| CDY46209 | Canola | nucleus | 21.96 | 34.92 |
| TraesCS4D01G062100.1 | Wheat | nucleus | 45.92 | 34.37 |
| CDX89711 | Canola | nucleus | 25.96 | 34.29 |
| HORVU4Hr1G010430.6 | Barley | nucleus | 45.92 | 34.12 |
| CDY29411 | Canola | nucleus | 21.96 | 33.93 |
| CDY02261 | Canola | nucleus | 25.29 | 33.85 |
| CDX75307 | Canola | nucleus | 12.15 | 32.88 |
| CDY52073 | Canola | nucleus | 25.29 | 32.27 |
| CDY39031 | Canola | nucleus | 25.46 | 32.01 |
| CDX68129 | Canola | nucleus | 24.46 | 31.08 |
| CDY44476 | Canola | nucleus | 28.79 | 30.46 |
| CDY47524 | Canola | nucleus | 26.12 | 30.43 |
| CDX73170 | Canola | nucleus | 25.96 | 30.35 |
| CDX85896 | Canola | nucleus | 24.96 | 29.82 |
| CDX96653 | Canola | nucleus | 23.29 | 27.67 |
| CDY63699 | Canola | nucleus | 18.97 | 27.27 |
| CDY39359 | Canola | nucleus | 23.46 | 27.17 |
| CDX71279 | Canola | nucleus | 17.3 | 26.8 |
| CDY30566 | Canola | nucleus | 19.97 | 26.79 |
| CDX77099 | Canola | nucleus | 19.97 | 26.73 |
| CDY40420 | Canola | nucleus | 27.45 | 26.11 |
| CDY40327 | Canola | nucleus | 24.96 | 25.95 |
| CDY32069 | Canola | nucleus | 27.45 | 25.94 |
| CDY10473 | Canola | nucleus | 24.79 | 25.91 |
| CDY69132 | Canola | nucleus | 24.29 | 25.44 |
| CDY48107 | Canola | nucleus | 24.29 | 25.39 |
| CDX84171 | Canola | nucleus | 24.29 | 24.83 |
| CDX84585 | Canola | nucleus | 27.29 | 24.44 |
| CDX79646 | Canola | nucleus | 27.29 | 23.73 |
| CDX75085 | Canola | nucleus | 24.63 | 23.57 |
| CDY55113 | Canola | nucleus | 20.47 | 23.52 |
| CDX80798 | Canola | nucleus | 20.13 | 22.74 |
| CDY13511 | Canola | nucleus | 16.14 | 22.2 |
| CDY45321 | Canola | nucleus, plastid | 25.12 | 22.04 |
| CDX68927 | Canola | nucleus | 16.64 | 21.69 |
| CDX75313 | Canola | nucleus | 16.81 | 21.67 |
| CDX72383 | Canola | nucleus | 15.64 | 20.8 |
| CDX68925 | Canola | cytosol | 4.33 | 14.36 |
| CDX68906 | Canola | nucleus | 5.16 | 11.97 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.5 | GO:A0A078CLD2 | EnsemblPlants:CDX76849 | ProteinID:CDX76849 | ProteinID:CDX76849.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00127359001 | InterPro:Homeobox-like_sf |
| InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF05920 | PFAM:PF07526 | InterPro:POX_dom |
| PFscan:PS50071 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF136 | SMART:SM00389 | SMART:SM00574 | SUPFAM:SSF46689 |
| UniParc:UPI0004EF3B37 | SEG:seg | : | : | : | : |
Description
BnaC08g34350D
Coordinates
chrLK031808:+:1461341..1466828
Molecular Weight (calculated)
66763.5 Da
IEP (calculated)
6.863
GRAVY (calculated)
-0.692
Length
601 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQDYHHHQG IFSFSNGFHR PSSSHQEEVE ESAVSGAPIP VYETAGMLSE MFSYPGGGSG EILDHSTKQL LEQQNRHNNN STLHMLLPNH HQGYRYANVQ
101: QQHHFTWPSS SDHQSQGDMI GTVHVEGGKG LSLSLSSSLE AVAAAKAEEY RSIYCAAVDG TSSSSNASAH QQFNQFKTLL LDNSTSHHEA VGHFGSSSSS
201: PMVASSSIGG IYTLRNSKYT KPAQELLEEF CSVGRGHFKK NKLSRNNNSN PNTSGGGGSS SSPGVANDNP PLSPADRIEH QRRKVKLLSM LEEVDRRYNH
301: YCEQMQMVVN SFDQVMGYGA AIPYTTLAQK AMSRHFRCLK DAVVVQLKRS CELLGENETA GAASSGLTKG ETPRLRLLEQ SLRQQRAFHH MGMMEQEAWR
401: PQRGLPERSV NILRAWLFEH FLNPYPSDAD KHLLARQTGL SRNQVSNWFI NARVRLWKPM VEEMYQQEAK EREEKGVEDY QQTNNSSNNS DTKPNESNFT
501: LVQTITAQTP TTTMMTPTPH ENDSSFLPSS VVTAVPHSVS DSFTAATCQQ DFSDHFQVND GVIRFGTKQA GDVSLTLGLR HTGNMPDNKN PSFSVRDFGD
601: F
101: QQHHFTWPSS SDHQSQGDMI GTVHVEGGKG LSLSLSSSLE AVAAAKAEEY RSIYCAAVDG TSSSSNASAH QQFNQFKTLL LDNSTSHHEA VGHFGSSSSS
201: PMVASSSIGG IYTLRNSKYT KPAQELLEEF CSVGRGHFKK NKLSRNNNSN PNTSGGGGSS SSPGVANDNP PLSPADRIEH QRRKVKLLSM LEEVDRRYNH
301: YCEQMQMVVN SFDQVMGYGA AIPYTTLAQK AMSRHFRCLK DAVVVQLKRS CELLGENETA GAASSGLTKG ETPRLRLLEQ SLRQQRAFHH MGMMEQEAWR
401: PQRGLPERSV NILRAWLFEH FLNPYPSDAD KHLLARQTGL SRNQVSNWFI NARVRLWKPM VEEMYQQEAK EREEKGVEDY QQTNNSSNNS DTKPNESNFT
501: LVQTITAQTP TTTMMTPTPH ENDSSFLPSS VVTAVPHSVS DSFTAATCQQ DFSDHFQVND GVIRFGTKQA GDVSLTLGLR HTGNMPDNKN PSFSVRDFGD
601: F
001: MGLATTTSSM SQDYHHHQGI FSFSNGFHRS SSTTHQEEVD ESAVVSGAQI PVYETAGMLS EMFAYPGGGG GGSGGEILDQ STKQLLEQQN RHNNNNNSTL
101: HMLLPNHHQG FAFTDENTMQ PQQQQHFTWP SSSSDHHQNR DMIGTVHVEG GKGLSLSLSS SLAAAKAEEY RSIYCAAVDG TSSSSNASAH HHQFNQFKNL
201: LLENSSSQHH HHQVVGHFGS SSSSPMAASS SIGGIYTLRN SKYTKPAQEL LEEFCSVGRG HFKKNKLSRN NSNPNTTGGG GGGGSSSSAG TANDSPPLSP
301: ADRIEHQRRK VKLLSMLEEV DRRYNHYCEQ MQMVVNSFDQ VMGYGAAVPY TTLAQKAMSR HFRCLKDAVA VQLKRSCELL GDKEAAGAAS SGLTKGETPR
401: LRLLEQSLRQ QRAFHHMGMM EQEAWRPQRG LPERSVNILR AWLFEHFLNP YPSDADKHLL ARQTGLSRNQ VSNWFINARV RLWKPMVEEM YQQEAKEREE
501: AEEENENQQQ QRRQQQTNNN DTKPNNNENN FTVITAQTPT TMTSTHHEND SSFLSSVAAA SHGGSDAFTV ATCQQDVSDF HVDGDGVNVI RFGTKQTGDV
601: SLTLGLRHSG NIPDKNTSFS VRDFGDF
101: HMLLPNHHQG FAFTDENTMQ PQQQQHFTWP SSSSDHHQNR DMIGTVHVEG GKGLSLSLSS SLAAAKAEEY RSIYCAAVDG TSSSSNASAH HHQFNQFKNL
201: LLENSSSQHH HHQVVGHFGS SSSSPMAASS SIGGIYTLRN SKYTKPAQEL LEEFCSVGRG HFKKNKLSRN NSNPNTTGGG GGGGSSSSAG TANDSPPLSP
301: ADRIEHQRRK VKLLSMLEEV DRRYNHYCEQ MQMVVNSFDQ VMGYGAAVPY TTLAQKAMSR HFRCLKDAVA VQLKRSCELL GDKEAAGAAS SGLTKGETPR
401: LRLLEQSLRQ QRAFHHMGMM EQEAWRPQRG LPERSVNILR AWLFEHFLNP YPSDADKHLL ARQTGLSRNQ VSNWFINARV RLWKPMVEEM YQQEAKEREE
501: AEEENENQQQ QRRQQQTNNN DTKPNNNENN FTVITAQTPT TMTSTHHEND SSFLSSVAAA SHGGSDAFTV ATCQQDVSDF HVDGDGVNVI RFGTKQTGDV
601: SLTLGLRHSG NIPDKNTSFS VRDFGDF
Arabidopsis Description
BLH4BEL1-like homeodomain 4 [Source:TAIR;Acc:AT2G23760]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.