Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010577.1-P | Field mustard | nucleus | 48.66 | 99.09 |
| CDY24765 | Canola | nucleus | 93.73 | 94.15 |
| CDX69252 | Canola | nucleus | 78.81 | 79.16 |
| CDX75604 | Canola | nucleus | 78.66 | 78.77 |
| AT4G36870.2 | Thale cress | nucleus | 84.03 | 76.18 |
| CDX76849 | Canola | nucleus | 57.91 | 64.56 |
| CDY46061 | Canola | nucleus | 57.46 | 63.32 |
| CDY39669 | Canola | nucleus | 59.25 | 61.55 |
| CDY62523 | Canola | nucleus | 59.25 | 61.27 |
| GSMUA_Achr5P08840_001 | Banana | nucleus | 27.76 | 58.68 |
| GSMUA_Achr4P14670_001 | Banana | nucleus | 25.37 | 57.24 |
| VIT_18s0001g11800.t01 | Wine grape | nucleus | 29.4 | 56.45 |
| GSMUA_Achr4P07450_001 | Banana | nucleus | 25.22 | 55.78 |
| GSMUA_Achr1P26900_001 | Banana | nucleus | 31.79 | 53.52 |
| CDX83753 | Canola | nucleus | 14.63 | 51.58 |
| Solyc04g079830.2.1 | Tomato | nucleus | 43.73 | 42.34 |
| CDY21826 | Canola | extracellular, plastid | 5.97 | 41.67 |
| CDY45383 | Canola | nucleus | 16.27 | 41.44 |
| GSMUA_Achr7P27440_001 | Banana | nucleus | 41.79 | 40.94 |
| TraesCS4B01G063100.1 | Wheat | nucleus, plastid | 43.28 | 39.14 |
| EER93512 | Sorghum | nucleus, plastid | 43.88 | 38.18 |
| TraesCS4A01G252100.2 | Wheat | nucleus | 43.88 | 38.13 |
| Zm00001d033898_P002 | Maize | nucleus | 42.69 | 37.88 |
| CDX73171 | Canola | nucleus | 15.97 | 37.02 |
| CDY47523 | Canola | nucleus | 15.82 | 36.68 |
| TraesCS4D01G062100.1 | Wheat | nucleus | 43.88 | 36.61 |
| Os03t0732100-01 | Rice | nucleus | 42.84 | 36.33 |
| HORVU4Hr1G010430.6 | Barley | nucleus | 43.28 | 35.85 |
| CDX89711 | Canola | nucleus | 23.28 | 34.29 |
| CDY46209 | Canola | nucleus | 19.25 | 34.13 |
| CDY02261 | Canola | nucleus | 22.84 | 34.08 |
| CDY29411 | Canola | nucleus | 19.7 | 33.93 |
| CDX75307 | Canola | nucleus | 11.19 | 33.78 |
| CDY52073 | Canola | nucleus | 23.13 | 32.91 |
| CDY39031 | Canola | nucleus | 23.13 | 32.43 |
| CDX73170 | Canola | nucleus | 23.88 | 31.13 |
| CDX68129 | Canola | nucleus | 21.94 | 31.08 |
| CDY47524 | Canola | nucleus | 23.73 | 30.81 |
| CDY44476 | Canola | nucleus | 25.97 | 30.63 |
| CDX85896 | Canola | nucleus | 22.54 | 30.02 |
| CDX96653 | Canola | nucleus | 21.94 | 29.05 |
| CDY63699 | Canola | nucleus | 17.91 | 28.71 |
| CDY39359 | Canola | nucleus | 21.94 | 28.32 |
| CDY10473 | Canola | nucleus | 22.69 | 26.43 |
| CDY40327 | Canola | nucleus | 22.54 | 26.12 |
| CDY40420 | Canola | nucleus | 24.33 | 25.79 |
| CDX71279 | Canola | nucleus | 14.93 | 25.77 |
| CDY32069 | Canola | nucleus | 24.18 | 25.47 |
| CDY30566 | Canola | nucleus | 17.01 | 25.45 |
| CDX77099 | Canola | nucleus | 17.01 | 25.39 |
| CDY69132 | Canola | nucleus | 21.64 | 25.26 |
| CDX84171 | Canola | nucleus | 21.94 | 25.0 |
| CDY48107 | Canola | nucleus | 21.34 | 24.87 |
| CDX84585 | Canola | nucleus | 24.48 | 24.44 |
| CDY55113 | Canola | nucleus | 18.81 | 24.09 |
| CDX75085 | Canola | nucleus | 22.39 | 23.89 |
| CDX80798 | Canola | nucleus | 18.81 | 23.68 |
| CDX79646 | Canola | nucleus | 24.33 | 23.59 |
| CDY13511 | Canola | nucleus | 14.48 | 22.2 |
| CDX68927 | Canola | nucleus | 15.07 | 21.91 |
| CDY45321 | Canola | nucleus, plastid | 22.39 | 21.9 |
| CDX75313 | Canola | nucleus | 15.22 | 21.89 |
| CDX72383 | Canola | nucleus | 14.48 | 21.46 |
| CDX68925 | Canola | cytosol | 3.88 | 14.36 |
| CDX68906 | Canola | nucleus | 4.48 | 11.58 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.5 | GO:A0A078GCQ8 | UniProt:A0A078GCQ8 | EnsemblPlants:CDY22463 | ProteinID:CDY22463 |
| ProteinID:CDY22463.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00019012001 | InterPro:Homeobox-like_sf |
| InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF05920 | PFAM:PF07526 | InterPro:POX_dom |
| PFscan:PS50071 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF136 | SMART:SM00389 | SMART:SM00574 | SUPFAM:SSF46689 |
| UniParc:UPI0004EDD2D1 | SEG:seg | : | : | : | : |
Description
BnaC03g61760DBnaC03g61760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GCQ8]
Coordinates
chrLK032131:-:620429..625175
Molecular Weight (calculated)
74046.6 Da
IEP (calculated)
7.188
GRAVY (calculated)
-0.771
Length
670 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQDYHHHHH QQHQGGIISF SNGFDRLNST SLTAQQKQEH QRIKMDEESS VAGSGIPVYE TAGILSDMFN FPGSSGAVGG GDLDHDQSFR SNRQFLEKQH
101: QNIPGDSAAA MQLFLMNPPH PPQQPPSPAS TTTTRSHHNN SSTLHMLLPN PSHQQGYTNT MSMHQIPHQH HHQQLTWQSP SSSDHHHHHN SQTGGQGLSL
201: SLSTSLEAAA KAEEYRNIYY GNSSSNTSSH HQHSQFKTLL ADYSQHQFRS SPAASSSSTG AINIIRNSRY TTAAQELLEE FCTVGRGFSK KIKLRNSSNP
301: NTSGGDGGSG SPSSAGAITD QPPLSASDRI EYQRRKVKLL TMLEEVDRRY NHYCEQMQMV VNSFDIVMGH GAALPYTALA QKAMSRHFRC LKDAVVAQLR
401: QSCELLGDKD AAGISSSGLT KGETPRLRLL EQSLRQQRAF HQMGMMEQEA WRPQRGLPER SVNILRAWLF EHFLHPYPSD ADKHLLARQT GLSRNQVSNW
501: FINARVRLWK PMVEEMYQQE SKELEENEQD QETKNSNSDK STKPNNDDSN FTPVRTTSQT SMTAAQSATT APDADAAVAT GHRLRSSSDI NAYENDPSSS
601: CTNVAAVSSY AGSTAFSAVA TCQKGIGGFD DTDMDGGNAI RFGTNPTGDV SLTLGLRHVS NMPDQRFFLR
101: QNIPGDSAAA MQLFLMNPPH PPQQPPSPAS TTTTRSHHNN SSTLHMLLPN PSHQQGYTNT MSMHQIPHQH HHQQLTWQSP SSSDHHHHHN SQTGGQGLSL
201: SLSTSLEAAA KAEEYRNIYY GNSSSNTSSH HQHSQFKTLL ADYSQHQFRS SPAASSSSTG AINIIRNSRY TTAAQELLEE FCTVGRGFSK KIKLRNSSNP
301: NTSGGDGGSG SPSSAGAITD QPPLSASDRI EYQRRKVKLL TMLEEVDRRY NHYCEQMQMV VNSFDIVMGH GAALPYTALA QKAMSRHFRC LKDAVVAQLR
401: QSCELLGDKD AAGISSSGLT KGETPRLRLL EQSLRQQRAF HQMGMMEQEA WRPQRGLPER SVNILRAWLF EHFLHPYPSD ADKHLLARQT GLSRNQVSNW
501: FINARVRLWK PMVEEMYQQE SKELEENEQD QETKNSNSDK STKPNNDDSN FTPVRTTSQT SMTAAQSATT APDADAAVAT GHRLRSSSDI NAYENDPSSS
601: CTNVAAVSSY AGSTAFSAVA TCQKGIGGFD DTDMDGGNAI RFGTNPTGDV SLTLGLRHVS NMPDQRFFLR
001: MGITKTSPNT TILLKTFHNN SMSQDYHHHH HHNQHQGGIF NFSNGFDRSD SPNLTTQQKQ EHQRVEMDEE SSVAGGRIPV YESAGMLSEM FNFPGSSGGG
101: RDLDLGQSFR SNRQLLEEQH QNIPAMNATD SATATAAAMQ LFLMNPPPPQ QPPSPSSTTS PRSHHNSSTL HMLLPSPSTN TTHHQNYTNH MSMHQLPHQH
201: HQQISTWQSS PDHHHHHHNS QTEIGTVHVE NSGGHGGQGL SLSLSSSLEA AAKAEEYRNI YYGANSSNAS PHHQYNQFKT LLANSSQHHH QVLNQFRSSP
301: AASSSSMAAV NILRNSRYTT AAQELLEEFC SVGRGFLKKN KLGNSSNPNT CGGDGGGSSP SSAGANKEHP PLSASDRIEH QRRKVKLLTM LEEVDRRYNH
401: YCEQMQMVVN SFDIVMGHGA ALPYTALAQK AMSRHFRCLK DAVAAQLKQS CELLGDKDAA GISSSGLTKG ETPRLRLLEQ SLRQNRAFHQ MGMMEQEAWR
501: PQRGLPERSV NILRAWLFEH FLHPYPSDAD KHLLARQTGL SRNQVSNWFI NARVRLWKPM VEEMYQQESK EREREEELEE NEEDQETKNS NDDKSTKSNN
601: NESNFTAVRT TSQTPTTTAP DASDADAAVA TGHRLRSNIN AYENDASSLL LPSSYSNAAA PAAVSDDLNS RYGGSDAFSA VATCQQSVGG FDDADMDGVN
701: VIRFGTNPTG DVSLTLGLRH AGNMPDKDAS FCVREFGGF
101: RDLDLGQSFR SNRQLLEEQH QNIPAMNATD SATATAAAMQ LFLMNPPPPQ QPPSPSSTTS PRSHHNSSTL HMLLPSPSTN TTHHQNYTNH MSMHQLPHQH
201: HQQISTWQSS PDHHHHHHNS QTEIGTVHVE NSGGHGGQGL SLSLSSSLEA AAKAEEYRNI YYGANSSNAS PHHQYNQFKT LLANSSQHHH QVLNQFRSSP
301: AASSSSMAAV NILRNSRYTT AAQELLEEFC SVGRGFLKKN KLGNSSNPNT CGGDGGGSSP SSAGANKEHP PLSASDRIEH QRRKVKLLTM LEEVDRRYNH
401: YCEQMQMVVN SFDIVMGHGA ALPYTALAQK AMSRHFRCLK DAVAAQLKQS CELLGDKDAA GISSSGLTKG ETPRLRLLEQ SLRQNRAFHQ MGMMEQEAWR
501: PQRGLPERSV NILRAWLFEH FLHPYPSDAD KHLLARQTGL SRNQVSNWFI NARVRLWKPM VEEMYQQESK EREREEELEE NEEDQETKNS NDDKSTKSNN
601: NESNFTAVRT TSQTPTTTAP DASDADAAVA TGHRLRSNIN AYENDASSLL LPSSYSNAAA PAAVSDDLNS RYGGSDAFSA VATCQQSVGG FDDADMDGVN
701: VIRFGTNPTG DVSLTLGLRH AGNMPDKDAS FCVREFGGF
Arabidopsis Description
BLH2BEL1-like homeodomain protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW80]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.