CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	secretory

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017666.1-P	Field mustard	nucleus	67.45	87.5
AT4G34610.3	Thale cress	nucleus	55.77	71.8
CDY46209	Canola	nucleus	34.01	61.64
CDY02261	Canola	nucleus	38.83	59.24
CDX89711	Canola	nucleus	39.27	59.12
CDX83753	Canola	nucleus	15.91	57.37
CDX71279	Canola	nucleus	28.91	51.03
GSMUA_Achr1P23300_001	Banana	extracellular	28.47	45.14
CDY21826	Canola	extracellular, plastid	5.99	42.71
GSMUA_Achr3P29230_001	Banana	nucleus	28.18	42.7
CDX73171	Canola	nucleus	17.08	40.48
GSMUA_Achr9P21580_001	Banana	nucleus	31.82	39.93
CDY47523	Canola	nucleus	16.79	39.79
CDY29411	Canola	nucleus	22.48	39.59
CDX75307	Canola	nucleus	12.7	39.19
CDY52073	Canola	nucleus	25.84	37.58
GSMUA_Achr4P13590_001	Banana	nucleus	31.09	37.43
CDY39031	Canola	nucleus	25.84	37.03
CDX68129	Canola	nucleus	24.82	35.94
GSMUA_Achr4P06630_001	Banana	nucleus	29.64	35.87
CDY47524	Canola	nucleus	26.72	35.47
CDX73170	Canola	nucleus	26.42	35.21
VIT_03s0038g00050.t01	Wine grape	nucleus	35.47	35.17
CDY63699	Canola	nucleus	21.02	34.45
CDX85896	Canola	nucleus	24.82	33.8
TraesCS4D01G022600.1	Wheat	nucleus	30.8	33.07
TraesCS4A01G289400.1	Wheat	nucleus	30.8	33.07
HORVU4Hr1G003800.7	Barley	nucleus	30.95	32.92
TraesCS4B01G025500.1	Wheat	nucleus	30.51	32.71
Os12t0636200-01	Rice	nucleus	30.8	32.61
CDX96653	Canola	nucleus	24.09	32.61
CDY39359	Canola	nucleus	24.67	32.56
KXG24130	Sorghum	nucleus	31.24	32.52
EER91079	Sorghum	nucleus	30.66	32.36
CDY45383	Canola	nucleus	12.41	32.32
Zm00001d013547_P002	Maize	nucleus	30.07	32.24
Zm00001d033378_P003	Maize	nucleus	30.36	31.95
HORVU5Hr1G001090.1	Barley	nucleus	30.07	31.74
TraesCS5A01G007800.1	Wheat	nucleus	29.93	31.54
TraesCS5D01G013300.1	Wheat	nucleus	29.78	31.38
Os03t0680800-02	Rice	nucleus	30.8	31.26
Zm00001d031182_P002	Maize	nucleus	30.22	30.99
TraesCS5B01G006400.1	Wheat	nucleus	29.78	30.31
CDY40420	Canola	nucleus	25.26	27.37
CDY32069	Canola	nucleus	25.26	27.2
CDX77099	Canola	nucleus	17.52	26.73
CDY30566	Canola	nucleus	17.37	26.56
CDX79646	Canola	nucleus	26.28	26.05
GSMUA_Achr2P06420_001	Banana	nucleus	14.01	26.02
CDX84585	Canola	nucleus	25.26	25.78
CDX84171	Canola	nucleus	22.04	25.68
CDY46061	Canola	nucleus	22.34	25.16
CDX76849	Canola	nucleus	22.04	25.12
CDX75085	Canola	nucleus	22.34	24.36
CDY39669	Canola	nucleus	22.48	23.88
CDY62523	Canola	nucleus	22.34	23.61
CDX68927	Canola	nucleus	15.77	23.43
CDX75604	Canola	nucleus	22.48	23.02
CDY44476	Canola	nucleus	18.98	22.89
CDX69252	Canola	nucleus	22.19	22.79
CDX75313	Canola	nucleus	15.33	22.53
CDY24765	Canola	nucleus	21.9	22.49
CDY22463	Canola	nucleus	21.9	22.39
CDY13511	Canola	nucleus	14.16	22.2
CDX72383	Canola	nucleus	14.01	21.24
CDX68925	Canola	cytosol	5.55	20.99
CDY10473	Canola	nucleus	17.37	20.7
CDY69132	Canola	nucleus	17.23	20.56
CDY40327	Canola	nucleus	17.23	20.42
CDY48107	Canola	nucleus	17.08	20.35
CDX80798	Canola	nucleus	14.16	18.23
CDY55113	Canola	nucleus	13.87	18.16
CDX68906	Canola	nucleus	4.23	11.2

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.5	GO:A0A078I5X8	UniProt:A0A078I5X8	EnsemblPlants:CDY45321	ProteinID:CDY45321
ProteinID:CDY45321.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0044212	EnsemblPlantsGene:GSBRNA2T00081778001
InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356	PFAM:PF05920	PFAM:PF07526
InterPro:POX_dom	PFscan:PS50071	PANTHER:PTHR11850	PANTHER:PTHR11850:SF65	SMART:SM00389	SMART:SM00574
SUPFAM:SSF46689	UniParc:UPI0004EE53DF	SEG:seg	:	:	:

Description

BnaA03g52940DBEL1-like homeodomain protein 6 [Source:Projected from Arabidopsis thaliana (AT4G34610) UniProtKB/Swiss-Prot;Acc:O65685]

Coordinates

chrLK032620:-:131142..138599

Molecular Weight (calculated)

67308.9 Da

IEP (calculated)

8.095

GRAVY (calculated)

-0.455

Length

685 amino acids

Sequence
(BLAST)

001: MWFDLIPPAN ILIRDFSQAL FLYYSSMKTK GSLSSFNTVY YKISVLLQKK RKSFTFCNLL DHHFHFFNFN IRFSFVFFNK AAVYIQDKGL WNSTDPRNTL
101: HCYISMDYQE ARFLPGNAMI HMNPTVSYSE EVAGKERTEA NNVSASQETQ AYSRFGGVSQ MQDIQGFGSW RDQACDRSGF QPMSAIAGPT GVHQTGQGLS
201: LSLGSQILPG IHQGMSPRPE HFRGNEYATQ SISVGNPNMD VVRTIPNSKY LKAAQELLDE AVNVKKSLKQ FQPEGDKNKE NPQETDKNPQ DSNMNPPAEI
301: SQSERQELHN KLTKLLSMLD EVDRRYKQYY QQMQIVVSSF DVIAGYGAAK PYTALALQTI SRHFRSLRDA ISGQIVVTRK CLGEQDGSDG KGVGTISRLK
401: YVDQHLRQQR GFMQPQAWRP QRGLPENSVL VLRAWLFEHF LHPYPKDSDK IMLARQTGLS RGQVSNWFIN ARVRLWKPMV EEIYKEEFTE HDSNSSSDST
501: PKMSEVRPVV ADDEDRAQEL PQDHGHEYGV ETCGMVQGGH QMDGGRFISI EPTYHVAEIS RFGGGGXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
601: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXN IVHQCLIFHS LQYCMITKPY IVVIK

Best Arabidopsis Sequence Match ( AT4G34610.2 )
(BLAST)

001: MENYPETQFI PGDSMIQNAI VSYSEESAGR ERRTEANNVS ASQERQALSR FGGVPQMQNI GQDFGSWRDQ ASDRNGFQLM SAMAGATGIL QTGQGLSLSL
101: GSQILPGIHQ ISHQNMAPRG NEYATQSFPG GNQNLDVVRT IPNSKYLKAA QQLLDEAVNV KKALKQFQAE GDKNNENPQE PNQSTQDSST NPPADISQSE
201: RQEMQSKLTK LLSMLDEVDR RYKQYYQQMQ IVVSSFDVIA GYGAAKPYTA LALQTISRHF RSLRDAISGQ ILVLRKCLGE QQDGSDGKRV GIISRLKYVD
301: QHLRQQRGFM QPQAWRPQRG LPENSVLILR AWLFEHFLHP YPKDSDKIML ARQTGLSRGQ VSNWFINARV RLWKPMVEEI YKEEFTENDS NSSSENTPKM
401: SEIGPVAADD EDRAREFSQD QTKPDHGHGY GEETRGMVQG SHMDGRRFMA VEPTYHVADT SRLGRGDVSL TLGLQNSQGQ DNVVAMSSEA YNNFSGVDIY
501: ENAIPGDEME YVNPGSRQNR INSSQLVHDF VA

Arabidopsis Description

BLH6BEL1-like homeodomain protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O65685]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.