Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G022600.1 | Wheat | nucleus | 97.5 | 97.65 |
| TraesCS4A01G289400.1 | Wheat | nucleus | 97.34 | 97.49 |
| HORVU4Hr1G003800.7 | Barley | nucleus | 93.74 | 93.01 |
| EER91079 | Sorghum | nucleus | 77.15 | 75.96 |
| Zm00001d013547_P002 | Maize | nucleus | 74.18 | 74.18 |
| Zm00001d033378_P003 | Maize | nucleus | 75.27 | 73.89 |
| Os03t0680800-02 | Rice | nucleus | 77.46 | 73.33 |
| TraesCS5B01G006400.1 | Wheat | nucleus | 72.77 | 69.09 |
| GSMUA_Achr1P23300_001 | Banana | extracellular | 36.78 | 54.4 |
| GSMUA_Achr9P21580_001 | Banana | nucleus | 42.72 | 50.0 |
| GSMUA_Achr3P29230_001 | Banana | nucleus | 34.27 | 48.45 |
| GSMUA_Achr4P13590_001 | Banana | nucleus | 43.04 | 48.33 |
| CDY02261 | Canola | nucleus | 33.02 | 46.99 |
| Bra013075.1-P | Field mustard | nucleus | 31.14 | 46.71 |
| Bra013076.1-P | Field mustard | nucleus | 32.86 | 46.67 |
| CDX89711 | Canola | nucleus | 33.18 | 46.59 |
| AT2G16400.1 | Thale cress | nucleus | 34.12 | 45.23 |
| CDY46209 | Canola | nucleus | 26.45 | 44.71 |
| GSMUA_Achr4P06630_001 | Banana | nucleus | 39.28 | 44.35 |
| Bra017666.1-P | Field mustard | nucleus | 36.31 | 43.94 |
| VIT_03s0038g00050.t01 | Wine grape | nucleus | 46.95 | 43.42 |
| AT4G34610.3 | Thale cress | nucleus | 35.68 | 42.86 |
| Bra001976.1-P | Field mustard | nucleus | 28.95 | 41.67 |
| TraesCS4B01G280700.1 | Wheat | nucleus | 36.62 | 39.8 |
| CDX71279 | Canola | nucleus | 22.54 | 37.11 |
| TraesCS4B01G114600.1 | Wheat | nucleus | 32.24 | 31.12 |
| CDY45321 | Canola | nucleus, plastid | 32.71 | 30.51 |
| TraesCS4B01G025400.1 | Wheat | nucleus | 17.37 | 29.76 |
| GSMUA_Achr2P06420_001 | Banana | nucleus | 16.59 | 28.73 |
| TraesCS1B01G191800.1 | Wheat | nucleus | 24.88 | 27.18 |
| TraesCS4B01G063100.1 | Wheat | nucleus, plastid | 30.67 | 26.45 |
| TraesCS4B01G345600.1 | Wheat | nucleus | 25.2 | 26.35 |
| TraesCS1B01G290200.1 | Wheat | nucleus | 21.75 | 23.97 |
| TraesCS3B01G396100.1 | Wheat | nucleus | 21.91 | 22.58 |
| TraesCS7B01G269400.1 | Wheat | nucleus | 16.59 | 19.2 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.5 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF05920 |
| PFAM:PF07526 | InterPro:POX_dom | PFscan:PS50071 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF191 | SMART:SM00389 |
| SMART:SM00574 | SUPFAM:SSF46689 | EnsemblPlantsGene:TraesCS4B01G025500 | EnsemblPlants:TraesCS4B01G025500.1 | TIGR:cd00086 | SEG:seg |
Description
No Description!
Coordinates
chr4B:-:18162363..18165744
Molecular Weight (calculated)
70614.2 Da
IEP (calculated)
5.142
GRAVY (calculated)
-0.706
Length
639 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNYYSSPGD ERDPQTMYSP DTGNASYPVP SALGILLYSN NASSGPYTEF SGIIQPQQNF MELHGHPSEH SSSREPPNMV TSLTEQSSFA PVKDMRNEML
101: MHFMDGAQSG AGGGDLIHND AHSSAQLDFG LLNNPSSASV PSAPGQGLSL SLNTHILAPS YPYWSPKPDL LTTQSYQGDE NRMKNMQSEA SRAIRNSKYL
201: KAAQELLDEI VSVWKSIKQN AQKDKVEAGK MDGKDADEVL KSEGVSSNPQ ESTANAEPEI SAAEKQELQN KMAKLLAMLD EVDRKYKHYF HQMQIVVSSF
301: DMIAGSGAAK PYTAVALQTI SRHFRCLKDA INDQVNVIRK KLGEEDSSSG REGKLTRLRY IDQQLRQQRA FQQYGMLPQN AWRPQRGLPE NSVSILRAWL
401: FEHFLHPYPK DSEKLMLARQ TGLTRSQISN WFINARVRLW KPMIEDMYKE ETGEAELDSN SSSDNLPRSK DKMASCEDKE DLKCSMSQGQ AYQTSEFKAN
501: MEMAGLTGAP PSFHSEANSD DGFMNLLLKD QRPGEADGGL LHGDESARFM AYHLAELGGY QNSNVSLTLG LQHAENSLSA PNAHRPGFTA GGGEEDIYNT
601: TGAHPGGGDA VASSDYEPTN QLDQRQQFEP SPLLHDFVA
101: MHFMDGAQSG AGGGDLIHND AHSSAQLDFG LLNNPSSASV PSAPGQGLSL SLNTHILAPS YPYWSPKPDL LTTQSYQGDE NRMKNMQSEA SRAIRNSKYL
201: KAAQELLDEI VSVWKSIKQN AQKDKVEAGK MDGKDADEVL KSEGVSSNPQ ESTANAEPEI SAAEKQELQN KMAKLLAMLD EVDRKYKHYF HQMQIVVSSF
301: DMIAGSGAAK PYTAVALQTI SRHFRCLKDA INDQVNVIRK KLGEEDSSSG REGKLTRLRY IDQQLRQQRA FQQYGMLPQN AWRPQRGLPE NSVSILRAWL
401: FEHFLHPYPK DSEKLMLARQ TGLTRSQISN WFINARVRLW KPMIEDMYKE ETGEAELDSN SSSDNLPRSK DKMASCEDKE DLKCSMSQGQ AYQTSEFKAN
501: MEMAGLTGAP PSFHSEANSD DGFMNLLLKD QRPGEADGGL LHGDESARFM AYHLAELGGY QNSNVSLTLG LQHAENSLSA PNAHRPGFTA GGGEEDIYNT
601: TGAHPGGGDA VASSDYEPTN QLDQRQQFEP SPLLHDFVA
001: MENYPETQFI PGDSMIQNAI VSYSEESAGR ERRTEANNVS ASQERQALSR FGGVPQMQNI GQDFGSWRDQ ASDRNGFQLM SAMAGATGIL QTGQGLSLSL
101: GSQILPGIHQ ISHQNMAPRG NEYATQSFPG GNQNLDVVRT IPNSKYLKAA QQLLDEAVNV KKALKQFQAE GDKNNENPQE PNQSTQDSST NPPADISQSE
201: RQEMQSKLTK LLSMLDEVDR RYKQYYQQMQ IVVSSFDVIA GYGAAKPYTA LALQTISRHF RSLRDAISGQ ILVLRKCLGE QQDGSDGKRV GIISRLKYVD
301: QHLRQQRGFM QPQAWRPQRG LPENSVLILR AWLFEHFLHP YPKDSDKIML ARQTGLSRGQ VSNWFINARV RLWKPMVEEI YKEEFTENDS NSSSENTPKM
401: SEIGPVAADD EDRAREFSQD QTKPDHGHGY GEETRGMVQG SHMDGRRFMA VEPTYHVADT SRLGRGDVSL TLGLQNSQGQ DNVVAMSSEA YNNFSGVDIY
501: ENAIPGDEME YVNPGSRQNR INSSQLVHDF VA
101: GSQILPGIHQ ISHQNMAPRG NEYATQSFPG GNQNLDVVRT IPNSKYLKAA QQLLDEAVNV KKALKQFQAE GDKNNENPQE PNQSTQDSST NPPADISQSE
201: RQEMQSKLTK LLSMLDEVDR RYKQYYQQMQ IVVSSFDVIA GYGAAKPYTA LALQTISRHF RSLRDAISGQ ILVLRKCLGE QQDGSDGKRV GIISRLKYVD
301: QHLRQQRGFM QPQAWRPQRG LPENSVLILR AWLFEHFLHP YPKDSDKIML ARQTGLSRGQ VSNWFINARV RLWKPMVEEI YKEEFTENDS NSSSENTPKM
401: SEIGPVAADD EDRAREFSQD QTKPDHGHGY GEETRGMVQG SHMDGRRFMA VEPTYHVADT SRLGRGDVSL TLGLQNSQGQ DNVVAMSSEA YNNFSGVDIY
501: ENAIPGDEME YVNPGSRQNR INSSQLVHDF VA
Arabidopsis Description
BLH6BEL1-like homeodomain protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O65685]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.