Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G279300.1 | Wheat | nucleus | 97.28 | 97.44 |
| TraesCS4A01G022700.1 | Wheat | nucleus | 97.28 | 96.79 |
| HORVU4Hr1G074250.1 | Barley | nucleus | 95.92 | 95.76 |
| Os03t0165300-02 | Rice | endoplasmic reticulum, vacuole | 72.96 | 69.98 |
| EER92806 | Sorghum | nucleus | 68.88 | 68.64 |
| Zm00001d027802_P002 | Maize | nucleus | 65.99 | 66.1 |
| TraesCS4B01G025500.1 | Wheat | nucleus | 39.8 | 36.62 |
| TraesCS5B01G006400.1 | Wheat | nucleus | 39.8 | 34.77 |
| TraesCS4B01G114600.1 | Wheat | nucleus | 36.73 | 32.63 |
| TraesCS4B01G025400.1 | Wheat | nucleus | 20.24 | 31.9 |
| TraesCS4B01G345600.1 | Wheat | nucleus | 28.91 | 27.82 |
| TraesCS1B01G191800.1 | Wheat | nucleus | 27.04 | 27.18 |
| TraesCS1B01G290200.1 | Wheat | nucleus | 23.81 | 24.14 |
| TraesCS4B01G063100.1 | Wheat | nucleus, plastid | 28.91 | 22.94 |
| TraesCS3B01G396100.1 | Wheat | nucleus | 23.81 | 22.58 |
| TraesCS7B01G269400.1 | Wheat | nucleus | 15.82 | 16.85 |
| GSMUA_Achr11P... | Banana | plastid | 8.67 | 12.5 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.5 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF05920 |
| PFAM:PF07526 | InterPro:POX_dom | PFscan:PS50071 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF139 | SMART:SM00389 |
| SMART:SM00574 | SUPFAM:SSF46689 | EnsemblPlantsGene:TraesCS4B01G280700 | EnsemblPlants:TraesCS4B01G280700.1 | TIGR:cd00086 | SEG:seg |
Description
No Description!
Coordinates
chr4B:-:563627267..563629115
Molecular Weight (calculated)
62965.2 Da
IEP (calculated)
6.283
GRAVY (calculated)
-0.595
Length
588 amino acids
Sequence
(BLAST)
(BLAST)
001: MATFFSTSND QRGLAGGGGG AGDMSFHHHY PMSNQYPDSS IGGLIPLPAS IVQQSHIAHG GGGGDGRDDE QAAFMGSRDG SELGGLQTQM LMGDGGASAG
101: QRSHQGGLSL SLGSQVPVSL YQYGRPGGMA AAASPTLMSP NQSAMAMAAS RNAQVNVYVQ NSRFLKAARE LLDEVVSVRD AIKRKGDRKD DSAGNGECGK
201: VEGDKGEENE GSSAAELSPA ERQDLQNKVT ALMAMLDQVD RRYRHYHQQM QMVVSSFDAV AGSGAARPYT ALALQTISRH FRSLRDAIGA QVQSARRSLG
301: EPQDGSGAGG LSRLRYIDQH LRQQRAMQQF GMMQQPQHAW RPQRGLPESA VSVLRAWLFE HFLHPYPKDS EKVMLARQAG LSRGQVSNWF INARVRLWKP
401: MVEEMYKEEF GAEMDSTNSS SENAGNKHSK VDEAACSEDQ DRDEFQSTST HAGASQLLNA YKSEPVGSMD AGPLSSFGGG DMGTYAPAGL SLNHHGPGGG
501: SLLQDAFPHH GDDTRFVPYG GNMGDLGGSV SLTLGLQHCN NNNNAGHVPP EQQGLLYGNP GDFDFLNGGD DRQRFASSSS QLLHDFVT
101: QRSHQGGLSL SLGSQVPVSL YQYGRPGGMA AAASPTLMSP NQSAMAMAAS RNAQVNVYVQ NSRFLKAARE LLDEVVSVRD AIKRKGDRKD DSAGNGECGK
201: VEGDKGEENE GSSAAELSPA ERQDLQNKVT ALMAMLDQVD RRYRHYHQQM QMVVSSFDAV AGSGAARPYT ALALQTISRH FRSLRDAIGA QVQSARRSLG
301: EPQDGSGAGG LSRLRYIDQH LRQQRAMQQF GMMQQPQHAW RPQRGLPESA VSVLRAWLFE HFLHPYPKDS EKVMLARQAG LSRGQVSNWF INARVRLWKP
401: MVEEMYKEEF GAEMDSTNSS SENAGNKHSK VDEAACSEDQ DRDEFQSTST HAGASQLLNA YKSEPVGSMD AGPLSSFGGG DMGTYAPAGL SLNHHGPGGG
501: SLLQDAFPHH GDDTRFVPYG GNMGDLGGSV SLTLGLQHCN NNNNAGHVPP EQQGLLYGNP GDFDFLNGGD DRQRFASSSS QLLHDFVT
001: MENYPETQFI PGDSMIQNAI VSYSEESAGR ERRTEANNVS ASQERQALSR FGGVPQMQNI GQDFGSWRDQ ASDRNGFQLM SAMAGATGIL QTGQGLSLSL
101: GSQILPGIHQ ISHQNMAPRG NEYATQSFPG GNQNLDVVRT IPNSKYLKAA QQLLDEAVNV KKALKQFQAE GDKNNENPQE PNQSTQDSST NPPADISQSE
201: RQEMQSKLTK LLSMLDEVDR RYKQYYQQMQ IVVSSFDVIA GYGAAKPYTA LALQTISRHF RSLRDAISGQ ILVLRKCLGE QQDGSDGKRV GIISRLKYVD
301: QHLRQQRGFM QPQAWRPQRG LPENSVLILR AWLFEHFLHP YPKDSDKIML ARQTGLSRGQ VSNWFINARV RLWKPMVEEI YKEEFTENDS NSSSENTPKM
401: SEIGPVAADD EDRAREFSQD QTKPDHGHGY GEETRGMVQG SHMDGRRFMA VEPTYHVADT SRLGRGDVSL TLGLQNSQGQ DNVVAMSSEA YNNFSGVDIY
501: ENAIPGDEME YVNPGSRQNR INSSQLVHDF VA
101: GSQILPGIHQ ISHQNMAPRG NEYATQSFPG GNQNLDVVRT IPNSKYLKAA QQLLDEAVNV KKALKQFQAE GDKNNENPQE PNQSTQDSST NPPADISQSE
201: RQEMQSKLTK LLSMLDEVDR RYKQYYQQMQ IVVSSFDVIA GYGAAKPYTA LALQTISRHF RSLRDAISGQ ILVLRKCLGE QQDGSDGKRV GIISRLKYVD
301: QHLRQQRGFM QPQAWRPQRG LPENSVLILR AWLFEHFLHP YPKDSDKIML ARQTGLSRGQ VSNWFINARV RLWKPMVEEI YKEEFTENDS NSSSENTPKM
401: SEIGPVAADD EDRAREFSQD QTKPDHGHGY GEETRGMVQG SHMDGRRFMA VEPTYHVADT SRLGRGDVSL TLGLQNSQGQ DNVVAMSSEA YNNFSGVDIY
501: ENAIPGDEME YVNPGSRQNR INSSQLVHDF VA
Arabidopsis Description
BLH6BEL1-like homeodomain protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O65685]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.