Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G007800.1 | Wheat | nucleus | 95.25 | 98.62 |
| TraesCS5D01G013300.1 | Wheat | nucleus | 94.8 | 98.15 |
| HORVU5Hr1G001090.1 | Barley | nucleus | 91.98 | 95.38 |
| Os12t0636200-01 | Rice | nucleus | 83.95 | 87.33 |
| KXG24130 | Sorghum | nucleus | 82.62 | 84.5 |
| Zm00001d031182_P002 | Maize | nucleus | 72.66 | 73.2 |
| TraesCS4B01G025500.1 | Wheat | nucleus | 69.09 | 72.77 |
| GSMUA_Achr1P23300_001 | Banana | extracellular | 34.77 | 54.17 |
| GSMUA_Achr9P21580_001 | Banana | nucleus | 40.71 | 50.18 |
| GSMUA_Achr4P13590_001 | Banana | nucleus | 39.97 | 47.28 |
| CDY02261 | Canola | nucleus | 31.35 | 46.99 |
| Bra013076.1-P | Field mustard | nucleus | 31.35 | 46.89 |
| CDX89711 | Canola | nucleus | 31.65 | 46.81 |
| Bra013075.1-P | Field mustard | nucleus | 29.42 | 46.48 |
| GSMUA_Achr3P29230_001 | Banana | nucleus | 30.76 | 45.8 |
| GSMUA_Achr4P06630_001 | Banana | nucleus | 38.04 | 45.23 |
| AT2G16400.1 | Thale cress | nucleus | 32.39 | 45.23 |
| VIT_03s0038g00050.t01 | Wine grape | nucleus | 45.17 | 43.99 |
| CDY46209 | Canola | nucleus | 24.67 | 43.92 |
| Bra001976.1-P | Field mustard | nucleus | 28.23 | 42.79 |
| Bra017666.1-P | Field mustard | nucleus | 33.43 | 42.61 |
| AT4G34610.3 | Thale cress | nucleus | 32.99 | 41.73 |
| TraesCS4B01G280700.1 | Wheat | nucleus | 34.77 | 39.8 |
| CDX71279 | Canola | nucleus | 21.4 | 37.11 |
| TraesCS4B01G114600.1 | Wheat | nucleus | 31.8 | 32.33 |
| CDY45321 | Canola | nucleus, plastid | 30.31 | 29.78 |
| TraesCS4B01G025400.1 | Wheat | nucleus | 16.49 | 29.76 |
| GSMUA_Achr2P06420_001 | Banana | nucleus | 15.45 | 28.18 |
| TraesCS1B01G191800.1 | Wheat | nucleus | 23.77 | 27.35 |
| TraesCS4B01G063100.1 | Wheat | nucleus, plastid | 28.68 | 26.05 |
| TraesCS4B01G345600.1 | Wheat | nucleus | 22.88 | 25.2 |
| TraesCS1B01G290200.1 | Wheat | nucleus | 20.06 | 23.28 |
| TraesCS3B01G396100.1 | Wheat | nucleus | 21.1 | 22.9 |
| TraesCS7B01G269400.1 | Wheat | nucleus | 15.3 | 18.66 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.5 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF05920 |
| PFAM:PF07526 | InterPro:POX_dom | PFscan:PS50071 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF191 | SMART:SM00389 |
| SMART:SM00574 | SUPFAM:SSF46689 | EnsemblPlantsGene:TraesCS5B01G006400 | EnsemblPlants:TraesCS5B01G006400.1 | TIGR:cd00086 | SEG:seg |
Description
No Description!
Coordinates
chr5B:-:7541069..7544050
Molecular Weight (calculated)
72355.5 Da
IEP (calculated)
5.980
GRAVY (calculated)
-0.725
Length
673 amino acids
Sequence
(BLAST)
(BLAST)
001: MATYYSSPGS ERESQDMYSR DPGGASYPMS SALGNLLYLN NPSSGPYTEF SGILQTQQNF MEMPAHGHHS AMSQDSSARE SQDMLASHHG QRSFGHVKDM
101: KNEMLMHMMD GAQSGGAELI HDDPHNGAQF EFGVLNNHDS SDVPVGQGQG QGQGLSLSLN TQILAPSLPY WSIKPDMLTP NSYQESLRID DIRMKNMQSE
201: ASRAIRHSRY LKAAQEVLDE VVNVWKNIKQ KAQKEQAEPG KADGKETDGG PKSEGASQES GANAAPELST AEKQELQNKM AKLMAMLDEV DRKYKHYYHQ
301: MQNVVASFDM VAGPGSAKPY TAVALQTISR HFRCLKDAIN DQINAIRKKL GEEENPSSKE GKLTRLRYID QQLRQQRAFQ QYGMIPQNAW RPQRGLPENS
401: VTVLRAWLFE HFLHPYPKDS EKLMLARQTG LTRSQISNWF INARVRLWKP MIEDMYKEET GDLEQDSNSS SDNVPRSKSK VASSEENEDL KNARARVCET
501: SQLSESRASM GTMNVGGAPV SFQNEPNPDD SFMNLMMKDQ RSGEADGGLL LHNAVAQHSD ESARFMAYHL AELGRYGNGN VSLTLGLQHS GSGLSVPNAQ
601: ANFAGVGDDD IYNAGAPLGV SIASSDYESL NQMDQRQRFE QSPLLHDFVA XXXXXXXXXX XXXXXXXXXX XRG
101: KNEMLMHMMD GAQSGGAELI HDDPHNGAQF EFGVLNNHDS SDVPVGQGQG QGQGLSLSLN TQILAPSLPY WSIKPDMLTP NSYQESLRID DIRMKNMQSE
201: ASRAIRHSRY LKAAQEVLDE VVNVWKNIKQ KAQKEQAEPG KADGKETDGG PKSEGASQES GANAAPELST AEKQELQNKM AKLMAMLDEV DRKYKHYYHQ
301: MQNVVASFDM VAGPGSAKPY TAVALQTISR HFRCLKDAIN DQINAIRKKL GEEENPSSKE GKLTRLRYID QQLRQQRAFQ QYGMIPQNAW RPQRGLPENS
401: VTVLRAWLFE HFLHPYPKDS EKLMLARQTG LTRSQISNWF INARVRLWKP MIEDMYKEET GDLEQDSNSS SDNVPRSKSK VASSEENEDL KNARARVCET
501: SQLSESRASM GTMNVGGAPV SFQNEPNPDD SFMNLMMKDQ RSGEADGGLL LHNAVAQHSD ESARFMAYHL AELGRYGNGN VSLTLGLQHS GSGLSVPNAQ
601: ANFAGVGDDD IYNAGAPLGV SIASSDYESL NQMDQRQRFE QSPLLHDFVA XXXXXXXXXX XXXXXXXXXX XRG
001: MENYPETQFI PGDSMIQNAI VSYSEESAGR ERRTEANNVS ASQERQALSR FGGVPQMQNI GQDFGSWRDQ ASDRNGFQLM SAMAGATGIL QTGQGLSLSL
101: GSQILPGIHQ ISHQNMAPRG NEYATQSFPG GNQNLDVVRT IPNSKYLKAA QQLLDEAVNV KKALKQFQAE GDKNNENPQE PNQSTQDSST NPPADISQSE
201: RQEMQSKLTK LLSMLDEVDR RYKQYYQQMQ IVVSSFDVIA GYGAAKPYTA LALQTISRHF RSLRDAISGQ ILVLRKCLGE QQDGSDGKRV GIISRLKYVD
301: QHLRQQRGFM QPQAWRPQRG LPENSVLILR AWLFEHFLHP YPKDSDKIML ARQTGLSRGQ VSNWFINARV RLWKPMVEEI YKEEFTENDS NSSSENTPKM
401: SEIGPVAADD EDRAREFSQD QTKPDHGHGY GEETRGMVQG SHMDGRRFMA VEPTYHVADT SRLGRGDVSL TLGLQNSQGQ DNVVAMSSEA YNNFSGVDIY
501: ENAIPGDEME YVNPGSRQNR INSSQLVHDF VA
101: GSQILPGIHQ ISHQNMAPRG NEYATQSFPG GNQNLDVVRT IPNSKYLKAA QQLLDEAVNV KKALKQFQAE GDKNNENPQE PNQSTQDSST NPPADISQSE
201: RQEMQSKLTK LLSMLDEVDR RYKQYYQQMQ IVVSSFDVIA GYGAAKPYTA LALQTISRHF RSLRDAISGQ ILVLRKCLGE QQDGSDGKRV GIISRLKYVD
301: QHLRQQRGFM QPQAWRPQRG LPENSVLILR AWLFEHFLHP YPKDSDKIML ARQTGLSRGQ VSNWFINARV RLWKPMVEEI YKEEFTENDS NSSSENTPKM
401: SEIGPVAADD EDRAREFSQD QTKPDHGHGY GEETRGMVQG SHMDGRRFMA VEPTYHVADT SRLGRGDVSL TLGLQNSQGQ DNVVAMSSEA YNNFSGVDIY
501: ENAIPGDEME YVNPGSRQNR INSSQLVHDF VA
Arabidopsis Description
BLH6BEL1-like homeodomain protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O65685]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.